| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,701,269 | +A | intergenic (‑380/+10) | uidA ← / ← uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,701,265 | 1 | . | A | 92.2% | 2181.0 / 150.9 | 604 | intergenic (‑376/+14) | uidA/uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Reads supporting (aligned to +/- strand): ref base . (24/23); new base A (265/289); total (292/312) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 624 total aligned reads displayed.
AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAA > NZ_CP025268/1701126‑1701399 | gTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑a‑a‑a < 1:7051475/140‑1 (MQ=255) tATTGGGCACGATAAACTCTCAGGCCATATGGCTACAGTGAATAGTTTGGGGGGAATTCTCCGCAGCCGGGAAGGATAATTTTTGCACAGAGAAAGTACGATAGGAAAGGCGGGCACAGGTATCACCAGCCCGCCG‑agcg > 2:138472/1‑137 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑aa‑‑agaga < 2:5991356/140‑1 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATAATTTGCGGGGAATTCTCCGAAGCCGGGAAGGAGAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑a‑a‑acacaga < 2:1544188/140‑7 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑Aa‑‑agagaga > 1:4429791/1‑140 (MQ=255) aCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑ACA‑Aa‑gagagag > 2:9429128/1‑140 (MQ=255) gATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGaa > 1:3417306/1‑140 (MQ=255) tAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATc > 2:9627932/1‑140 (MQ=255) aCTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAgg < 1:8979706/140‑1 (MQ=255) aCTCTCATGACAGAGGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATACTTTTTGCACAGAGAAATTACGAGATGAAACGCGGGCACAGTGATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAgg < 2:4539778/140‑1 (MQ=255) ctctCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGa < 2:9156090/140‑1 (MQ=255) ctctCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGa < 2:1247829/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGAt < 2:6416911/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGAt > 1:1879788/1‑140 (MQ=255) ctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATg < 1:2834937/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGc < 1:55709/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGc < 1:3276615/140‑1 (MQ=255) cATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCg > 2:6567506/1‑140 (MQ=255) cATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCg > 1:4745962/1‑140 (MQ=255) tGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGt < 2:4934316/140‑1 (MQ=255) tGACATATGGCTACAGTGAATAATTTGGGGGTAATTCTCCCAAGCCGGGAAGCATAATTTTTGCACAGAGAAATTAAGATATGAAACGCGGGCACAGTAAACACAAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCgat > 1:9452384/1‑138 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGa > 1:5533908/1‑140 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGa < 1:2114139/140‑1 (MQ=255) tGGCTACCGTGAAAATTTTGGGGGGAATTCTCCGAAGCCGGGACGGATAATTTTTGCACAGAGAAATTACGATATGAATCGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATa > 2:4268498/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATa < 2:6979183/140‑1 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATa > 1:7597546/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATa > 2:9541454/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATa > 1:2629855/1‑140 (MQ=255) gCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATAcc > 1:8270376/1‑140 (MQ=255) agagAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGGTAACACCATCCCGCAGCA‑A‑AA‑GAGAGAGAATCAGGAAGCGGTTAAGATACAGCCaa > 2:7971323/4‑140 (MQ=255) aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa > 1:537823/1‑140 (MQ=255) aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa > 2:7119563/1‑140 (MQ=255) aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa > 1:7494222/1‑140 (MQ=255) tGAATATTTTGGGGGGAATTCTCCGAAGCCGGGACGGATAATTTTTGCACAGAGAAATTACGATATGACACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatc > 2:5347681/1‑140 (MQ=255) tGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatc > 1:1123498/1‑140 (MQ=255) tGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatc > 1:6831871/1‑140 (MQ=255) tGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatc > 1:628023/1‑140 (MQ=255) gAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatca > 2:2666113/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 1:1781954/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 1:7782633/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat < 2:7852651/140‑1 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 2:195896/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑aa‑‑agaga < 1:1605599/105‑1 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑aa‑‑agaga > 2:1606145/1‑105 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg < 1:839306/140‑1 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg < 2:5820078/140‑1 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg > 2:5141913/1‑140 (MQ=255) tGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCCCAGTTATCACCAGCCCGCCG‑A‑ACAA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGt > 2:9748641/1‑140 (MQ=255) ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTa > 2:8599442/1‑140 (MQ=255) ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑AATGAGAGAGACTCAGGATGCGGTTAAGATACCGCCAATCAGCGCGCGtc > 1:7385129/1‑139 (MQ=255) gggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTaa < 1:8779539/140‑1 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 1:3092674/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 2:1795287/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 1:1509060/1‑140 (MQ=255) aaTTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCt > 1:3981600/1‑140 (MQ=255) aGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacga > 2:295971/1‑140 (MQ=255) gCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATCAAACGCGGCCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgac < 2:9052217/140‑1 (MQ=255) ggAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCtt < 1:577648/140‑1 (MQ=255) ggAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCtt > 1:3650013/1‑140 (MQ=255) aaGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCa < 1:6037157/140‑1 (MQ=255) aaGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAGCCCTGAGCAAACGACGCTTCa < 1:9220557/140‑1 (MQ=255) aaTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGcc < 2:2312221/140‑1 (MQ=255) aaTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTAACGCGcc < 2:8425688/140‑1 (MQ=255) tGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCt < 2:6252585/140‑1 (MQ=255) gCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCtt > 2:3544040/1‑140 (MQ=255) gCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑AACGAGAGAGAATCAGGAGGCGGTTAAGATACCGCCAATCATCGCGCGTCATCCCTGAGCAAACGACGCTTCACGCGCCAGGTcgt > 2:2896019/1‑138 (MQ=255) agaAATTACGTTATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 1:4955614/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt > 2:7539569/1‑140 (MQ=255) ttACGATATGCCCCGCGGGCAAAGGTATCACCAGCCCGCCGAA‑A‑AA‑GAGCGAGAATCAGGATTCGGTTACGATACCGCCACTCATCGCGCGGACGCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:2260570/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:4089790/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 2:8813772/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 2:73960/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 1:4314883/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 1:61893/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 2:8314108/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCCGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:7085438/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGAGGCGGTTACGATACCGCCAATCATCGCGCGTACTCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGCTCTCGGc > 2:6712679/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑ACAA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:6548342/140‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:8707756/140‑1 (MQ=255) aaCGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCACACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCCGTac > 1:8577996/1‑140 (MQ=255) cgcgGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTacac > 1:961071/1‑140 (MQ=255) gcgGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACAcc > 2:5475757/1‑140 (MQ=255) cgGGCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCg < 2:3105631/140‑1 (MQ=255) cgGGCACAGTTATCACCAGCCCGACGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCg < 2:724796/140‑1 (MQ=255) gggCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGt > 1:1297789/1‑140 (MQ=255) ggCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTa > 1:6124381/1‑140 (MQ=255) gCACAGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAg > 2:1063973/1‑140 (MQ=255) caGTTATCACCCGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 1:5103995/140‑1 (MQ=255) caGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 2:573981/140‑1 (MQ=255) caGTTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 2:3764547/140‑1 (MQ=255) caGGTATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 2:9807474/140‑1 (MQ=255) tATCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAATATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGAt < 1:8055124/140‑1 (MQ=255) aTCACCAGCCCGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGAGATCGGCCAGTACACCGTCGGTCAGATc > 2:4707501/1‑140 (MQ=255) cccGCCGAA‑A‑AA‑GAGAGAGACTCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCGTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:3239603/1‑140 (MQ=255) cccGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:1977860/1‑140 (MQ=255) cccGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:4187170/1‑140 (MQ=255) cccGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa < 2:3416641/140‑1 (MQ=255) cccGCCGAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:1005063/1‑140 (MQ=255) cgccgaA‑A‑AA‑GAGAGAGCATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTaaa < 2:2470135/140‑1 (MQ=255) cgccgaA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTaaa > 1:4872948/1‑140 (MQ=255) | AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAA > NZ_CP025268/1701126‑1701399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |