| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,855,625 | +C | intergenic (+116/‑50) | sppA → / → ansA | signal peptide peptidase SppA/asparaginase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,855,621 | 1 | . | C | 98.7% | 1785.2 / 13.3 | 518 | intergenic (+112/‑54) | sppA/ansA | signal peptide peptidase SppA/asparaginase |
| Reads supporting (aligned to +/- strand): ref base . (2/5); new base C (179/331); total (182/336) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01 | |||||||||||
Only 100 of 544 total aligned reads displayed.
TTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑CC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855482‑1855755 | ttGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATGTCCTTATCCGCATAGTATCAGGTGCGC‑t > 1:3667840/1‑140 (MQ=255) cTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑cc‑cc < 2:8924544/140‑1 (MQ=255) gACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑cc‑ccct > 2:3712154/1‑138 (MQ=255) aCCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑cc‑ccctg > 2:1132694/1‑137 (MQ=255) ccTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTACCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑cc‑ccctgc > 2:2711535/1‑136 (MQ=255) ccTGCGCCAACATGCGTTAAGTATTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑cc‑ccctgc < 2:7291889/140‑5 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCt < 2:5351130/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCt < 2:1593385/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCt < 1:3829755/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCt < 1:7121612/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCt < 1:6775150/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCt < 1:6601906/140‑1 (MQ=255) tGCGCCAACATGAGTTTAGTCTTGTACTGAGTGTCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCt < 2:9750506/140‑1 (MQ=255) gcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCAc > 1:2866079/1‑140 (MQ=255) gcCAACATGCGTGAAGTCTTGTAATGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGAAGAAAACTCTTCCCGCTGTTTCGCCCCATATTTCCGTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCAc > 2:6989943/1‑140 (MQ=255) aaCATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGta < 1:1015381/140‑1 (MQ=255) cATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGtata < 1:4761495/140‑1 (MQ=255) gTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGct > 2:4554257/1‑140 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCttt < 2:3982127/140‑1 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCttt > 2:6171860/1‑140 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCttt > 2:9069448/1‑140 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCttt < 1:1300548/140‑1 (MQ=255) tGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGata < 2:2616960/140‑1 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCt < 2:4115122/111‑1 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:2187729/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 2:2928635/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:8711507/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCGCTTCCCGCTGTTTCGCCCCATATTTCCGTATCCGCATAGTATCAGGTGCGCGC‑CC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGAtctc > 2:9174564/1‑140 (MQ=255) tGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcat > 1:2371475/1‑140 (MQ=255) tGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcat > 2:6001060/1‑140 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:1468652/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:6610871/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:5547085/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:1423180/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:4115243/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:9194676/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:5478816/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:5245646/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:4366806/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCAGAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:2737754/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTGACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:8065206/140‑1 (MQ=255) ggCCGAACGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTAGCCCCATATTTCCTTATCCGCATAGTTTCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:6237066/140‑1 (MQ=255) ccGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcattca > 1:3988476/1‑140 (MQ=255) tcgtcgGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatcaata < 1:8130112/140‑1 (MQ=255) gCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGc > 1:8563924/1‑140 (MQ=255) gCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGc > 2:7757715/1‑140 (MQ=255) caTTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCaaaa > 2:81896/1‑140 (MQ=255) tattatTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaa < 2:9564733/140‑1 (MQ=255) attTTTTACGTCGACGACTCCTCTTCCCGCTGTGTCGCCCCATATTTCCTTAGCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCCTTCATATCAATATCAGGCAAAAGaaa < 2:6514704/140‑1 (MQ=255) attTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTTTCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACGTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaaa < 2:5760056/140‑1 (MQ=255) tttACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATAGACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCaa < 2:3234002/140‑1 (MQ=255) aCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAGATCAAttt > 1:9470431/1‑140 (MQ=255) aCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAttt > 1:7015052/1‑140 (MQ=255) aCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAttt > 2:1830468/1‑140 (MQ=255) gTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTAc < 1:3438449/140‑1 (MQ=255) tCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACg < 1:316039/140‑1 (MQ=255) tCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACg < 1:6434942/140‑1 (MQ=255) gacgaATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGtt < 1:1698738/140‑1 (MQ=255) gacgaATCCTCGACCCGCTGAGACGCCCCAGCTTGCCACCTCCGCATAGGATCAGCTGCGC‑TCCC‑CCTGCATCACGACAATACTTTTGCTCTGTCGCTCACAAACAGAACAATATCATGCAAAAGAAACCACTGTCCGtt < 2:338850/140‑1 (MQ=255) acgaATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTg > 2:4708486/1‑140 (MQ=255) ccTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTaca < 1:7242347/140‑1 (MQ=255) tCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcgggc < 2:3500063/140‑1 (MQ=255) ccGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcgggcgg < 1:9413305/140‑1 (MQ=255) cGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAGATCAATTTACGTTGCCTACAcgggcggg < 2:1258270/140‑1 (MQ=255) cGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcgggcggg < 1:7633660/140‑1 (MQ=255) gCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGa > 1:8435748/1‑140 (MQ=255) gTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCa > 1:5394279/1‑140 (MQ=255) tatTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAg > 1:7994457/1‑140 (MQ=255) tatTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAg > 1:603293/1‑140 (MQ=255) tttCCTTCTCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCg < 1:9672142/140‑1 (MQ=255) tCCTTATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGtt < 2:4587944/140‑1 (MQ=255) tATCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGa > 1:783234/1‑140 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 2:8665706/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:754682/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:5868944/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:4861128/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:8280225/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATAATTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 2:7911764/140‑1 (MQ=255) tCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGc > 2:6337751/1‑140 (MQ=255) tCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGc > 2:6839295/1‑140 (MQ=255) tCCGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGc > 1:1994889/1‑140 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:4633884/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:8884185/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:1816531/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa > 2:2080267/1‑140 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCAAGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:9018661/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCC‑CCTGCCACACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGGTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:7548637/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑T‑CCACCTGCCGCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATTCAAAAGAAATCATTTTACGTTGACTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:5230559/140‑1 (MQ=255) gCATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAgg > 1:934233/1‑140 (MQ=255) cATAGTATCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg < 2:5860599/140‑1 (MQ=255) tCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa > 2:4339206/1‑130 (MQ=255) tCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTtatata < 1:3032752/140‑1 (MQ=255) tCAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTtatata < 2:2437162/140‑1 (MQ=255) cAGGTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 1:4545430/140‑1 (MQ=255) ggTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCg > 2:4952200/1‑140 (MQ=255) gTGCGC‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCgg > 1:5684372/1‑140 (MQ=255) gcgc‑TCCC‑CCTGCCTCTCGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATAAAGTTACGTTTCCTACACGGGCGGGTCCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACAGgtg > 2:7230753/1‑140 (MQ=255) gcgc‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 1:2645437/1‑140 (MQ=255) gcgc‑TCCC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 2:9416605/1‑140 (MQ=255) gcgc‑TCCC‑CCTGCCTCACGTAGATACTTTTGCACTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTTCGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 2:8467497/1‑140 (MQ=255) | TTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑CC‑CCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855482‑1855755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |