| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,204,490 | (A)7→8 | pseudogene (175/3632 nt) | CXP41_RS11705 → | DUF4132 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,204,483 | 1 | . | A | 94.8% | 1739.5 / 69.8 | 467 | pseudogene (168/3632 nt) | CXP41_RS11705 | DUF4132 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (13/11); new base A (230/210); total (244/223) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 500 total aligned reads displayed.
ATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204344‑2204617 | gCCCAACTGGAACTGAAATATCAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑‑aa‑aa‑a < 2:8129751/140‑1 (MQ=255) cccAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑‑aa‑aa‑aa > 1:1550661/1‑140 (MQ=255) cccAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑‑aa‑aa‑aa > 2:2446734/1‑140 (MQ=255) aCTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCt > 2:1337187/1‑140 (MQ=255) cTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTg > 1:197104/1‑140 (MQ=255) atatAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGtt > 1:8113657/1‑140 (MQ=255) taAAAAAGGCAAAACGCCGCTCAGTCATCTTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATg > 1:1097149/1‑140 (MQ=255) taAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATg > 2:673012/1‑140 (MQ=255) taAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATg > 1:9311447/1‑140 (MQ=255) acaGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGaa < 1:2063490/138‑1 (MQ=255) aaGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAAt > 1:1000638/1‑140 (MQ=255) aaaaCGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTc < 1:284021/140‑1 (MQ=255) ccgcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGa < 1:7945227/140‑1 (MQ=255) cTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTg > 1:5892193/1‑140 (MQ=255) cATCGTCTCTGGCCGGGCGAACCAGTGTCCGTGATCACTGGAAGTCTCAACCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CAGTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTc < 2:9444520/140‑1 (MQ=255) cATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTc < 2:5649475/140‑1 (MQ=255) cATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTc > 2:7506537/1‑140 (MQ=255) cATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTc < 2:7934807/140‑1 (MQ=255) tcgtcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCg < 1:6215404/140‑1 (MQ=255) tcgtcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCg > 1:1761171/1‑140 (MQ=255) gCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATc > 1:5633720/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 2:5456056/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 2:9710801/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 1:7405910/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACAGTGGGTGATGGATTGCTACAAAAAGCTGTGAAG‑‑AATTT‑AAA‑CATTGTCTGTCGTTATGAGGATTTTTCAGTGGAGTGGCAGTGCGGCATctg > 2:3979357/1‑138 (MQ=255) tGGCCGGGCGAACCAGTATCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 1:6675908/1‑140 (MQ=255) ccGGGCGAACCAGTGTCCGTTATCACTGGTAGTCTCATCAAGACATTGGGTGATGTCTTGCTACTACATGCTGAGAAG‑‑AA‑AA‑AAATCATTGTCTGGCGTTATGAGAATTTTTCACTGGAGGGGCAGTCCGCCACCACGCa < 2:1806424/140‑1 (MQ=255) ccGGGCGAACCAGTGGCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCa < 1:2756815/140‑1 (MQ=255) cGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACCTTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAg > 2:3798256/1‑140 (MQ=255) gCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGcc > 1:5260121/1‑140 (MQ=255) gCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGcc > 2:7724220/1‑140 (MQ=255) ccAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCaa > 2:879835/1‑140 (MQ=255) ccAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCaa > 1:1467067/1‑140 (MQ=255) gtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGa < 1:5510659/140‑1 (MQ=255) gTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCgg > 1:4985247/1‑140 (MQ=255) gTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCgg > 2:2258699/1‑140 (MQ=255) gTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCgg > 1:961104/1‑140 (MQ=255) ttATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGc < 2:9142454/140‑1 (MQ=255) tATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCg < 1:3559712/140‑1 (MQ=255) tATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCg > 2:7052433/1‑140 (MQ=255) cACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGGTCGGCGAac > 2:2991729/1‑140 (MQ=255) cACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAac > 2:3208198/1‑140 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac > 2:2196106/1‑140 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac > 2:6883559/1‑140 (MQ=255) tGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAAcaca < 2:936278/140‑1 (MQ=255) aggAAGTCTCATCCAGACAATGGGTGATGAATTGCTACAAAAAGCAGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAAATTTACACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAAcaca < 2:3577677/139‑1 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 2:8561182/1‑140 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 1:732559/1‑140 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 1:3269821/1‑140 (MQ=255) gAAGACTCATCCAGACATTGGGAGATGAAGTGCTACAAACAGCTGCGAAG‑‑AACAA‑AAA‑CATGGACTGGCGTTATGAGAATATTTCACTGGAGTGGCAGGCCGCCATCACGCAGGCCATCAACTTGATCGGCGACCACaaa < 2:7408739/140‑1 (MQ=255) tctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCt > 2:876363/1‑140 (MQ=255) tctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCANCAACTTGATCGGCGAACACAAACCCt > 1:7143597/1‑140 (MQ=255) ctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTc > 2:7626155/1‑140 (MQ=255) ctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTc > 2:4796530/1‑140 (MQ=255) aaccAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGACATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCATCaaa > 2:1550463/3‑139 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGACCACAAACCCTCAAt > 1:6056226/1‑140 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAt > 1:9844978/1‑140 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAt > 1:850640/1‑140 (MQ=255) tCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATc < 1:9185706/140‑1 (MQ=255) aGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccg > 2:2780460/1‑140 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc > 2:6135185/1‑140 (MQ=255) cATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcc < 2:4534278/140‑1 (MQ=255) cATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcc < 1:1864415/140‑1 (MQ=255) cATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcc < 1:131284/140‑1 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcccgg > 2:2843599/1‑140 (MQ=255) gggTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGa > 2:4208728/1‑140 (MQ=255) gggTGATGAATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGa > 2:53601/1‑140 (MQ=255) tgatgaATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACaa > 2:3697204/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:4799501/1‑140 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 1:5062905/140‑1 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg > 1:4930758/1‑140 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 1:9372350/140‑1 (MQ=255) gaATTGCTACAAAAAGCTGAGAAGAAAA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 1:7746033/140‑1 (MQ=255) gaATTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACTCAGGCCATCAACTTGATAGGCGAACACAAACCCTCAATCCCGCCCCGGACAATggc > 1:8232312/1‑140 (MQ=255) aaTTGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATggcg < 2:9598641/140‑1 (MQ=255) tGCTACAAACAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:8804617/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACACACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:456554/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:2196106/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:3355661/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:636154/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:6977771/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:9311447/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 2:9023076/1‑140 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:7562998/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:26165/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:8319150/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:8219221/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:4424553/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:2495761/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:6571375/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:4093569/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 2:6034157/1‑140 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGACAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:9044714/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCAATGGAGTGGCATTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:6256705/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTGATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:6460448/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAG‑‑AA‑AATAAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 2:1974962/1‑140 (MQ=255) gctaacaaaaGCTGTGAAGCAAA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAGCCCGGCCCGGACAATGgcggcg < 2:5011617/134‑1 (MQ=255) cTACAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCt > 2:7283774/1‑140 (MQ=255) cAAAAAGCTGAGAAGA‑AA‑AA‑AAA‑CAGTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACACACCCTCAATCCCGGCCCGGACAAGGGCGGCGCTAGc < 2:5825565/140‑1 (MQ=255) aaaGCTGAGAAGA‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTg > 1:231816/1‑140 (MQ=255) | ATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑‑AA‑AA‑AAA‑CATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204344‑2204617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |