| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,466,923 | (C)8→9 | intergenic (+242/‑123) | fadL → / → CXP41_RS12955 | long‑chain fatty acid transporter FadL/protein YfdF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,466,915 | 1 | . | C | 94.7% | 663.4 / 29.9 | 207 | intergenic (+234/‑131) | fadL/CXP41_RS12955 | long‑chain fatty acid transporter FadL/protein YfdF |
| Reads supporting (aligned to +/- strand): ref base . (1/10); new base C (21/174); total (22/185) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 265 total aligned reads displayed.
TTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑C‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCATG > NZ_CP025268/2466776‑2467048 | ttttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑t > 1:3393432/1‑140 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc < 2:9549905/140‑1 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc < 1:8752198/140‑1 (MQ=255) gCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑c > 2:1002923/1‑140 (MQ=255) cAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cc > 2:7498960/1‑140 (MQ=255) cAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cc < 1:1347595/140‑1 (MQ=255) cAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cc < 2:1478225/140‑1 (MQ=255) caccgCCTGGTGGCCCCGTGCCCGTTCAAATCCATACGCGGGATCCACAGACAAACCTGAAGGGAAAGGCAGACTTTCAGGCGTTCTGCTCGTCCGTCTCACAGAGTTTACTTGTCTGCATGTCCAGGATA‑‑C‑T‑c‑cc‑cccc < 2:2399903/136‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccc < 1:1002923/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccc < 2:5970592/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccc < 1:9277958/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccc < 1:8840657/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccc < 1:4285321/140‑1 (MQ=255) aCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑ccccc < 2:4612870/140‑1 (MQ=255) cAGCCTTTTGGCAGCTTTCCCATTCAAAACAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATGTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccccc < 2:8431311/140‑2 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCACTCAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTGACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccccc < 2:6117892/140‑2 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccccc < 1:8958678/140‑2 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccccc < 1:5908709/140‑2 (MQ=255) gTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTa < 2:7315477/140‑1 (MQ=255) ttGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑c‑cc‑cccccc > 2:8738024/1‑132 (MQ=255) tGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTAtt < 1:8391690/140‑1 (MQ=255) ggCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtg < 1:7189164/140‑1 (MQ=255) ggCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtg < 1:5091563/140‑1 (MQ=255) ggCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtg < 1:5752780/140‑1 (MQ=255) catcTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCATGATA‑‑C‑TCC‑CC‑CCCCCTGGCAATtgtg < 2:3148804/137‑1 (MQ=255) cAGCTTTCCCTTTCAAATCAATAAGCTGTATCCACAGACAAACCTGAATGGAAAGGCATATTTTCAGTCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTATGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtgtg < 2:6247513/140‑1 (MQ=255) cAGCTTGCCCTTTCACATCAATCAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtgtg < 1:1575636/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCNTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtgtg < 1:6313345/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtgtg < 2:7171224/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtgtg < 1:8169859/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTGTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtgtg < 2:5781584/140‑1 (MQ=255) cAGCTTGCCCTTGCAAATCAATCAGCGGTATCCACAGACAACCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtgtg < 1:7806120/140‑1 (MQ=255) cAGCTTGCCCTTACAAATCAATAAGCGGTATCCACAGACAACCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCACGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATtgtg < 2:923819/140‑1 (MQ=255) cAGCTTGCCCTGTCAAATCCATAAGCGGTATCCCCCGCCAAACCTGAAGGGAAAGGCATATTGTCAGGCGTTCTGCTCGTCCGTCTCAAAGAGTTCACTTTTCGGCATGTCCTGGATC‑‑CGC‑C‑CC‑CCCCCTGGCTATtgtg < 2:6847949/140‑1 (MQ=255) gattGCCCTTACAAAACAATAAGCTGTATCCACAGACAAACCTTAAGGTAAAGGAATATTTTAAGGCGTTCTGATCTTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGTAAA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTgcg < 2:9748817/138‑1 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTgcg < 2:4497477/140‑1 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGGgcg > 2:7995486/1‑140 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCGGGCTATTGTgcg < 2:484223/140‑1 (MQ=255) gCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCa < 1:359958/140‑1 (MQ=255) gCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑CGCC‑CCCCCGGGGTATTGGgcgggca > 2:6125817/1‑136 (MQ=255) ttCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATacac < 1:1735722/140‑1 (MQ=255) ttCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTATGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATacac < 2:1301812/140‑1 (MQ=255) tCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACt < 2:2043022/140‑1 (MQ=255) cAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTc < 1:7077782/140‑1 (MQ=255) cAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTc < 1:5808517/140‑1 (MQ=255) cAAATCAATAAGCGGTATCCAAAGACAAACCTGAAGGGAAAGGCATTTTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTAATACACTc < 2:5260240/140‑1 (MQ=255) tCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTCTTGTGCGCTCATACACTCAAAt > 1:4513540/1‑140 (MQ=255) aaTAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTa < 1:9293927/140‑1 (MQ=255) gcgcTATCCACAGACAAACCTGCAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:4918124/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTTAAGGGAAAGGCATATTTTCAGGCTTTCTGCTAGTCCTTCTCAAAGAGTTTACTTTTATGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:5861556/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCGTTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:2961506/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTACAGAt < 2:8990938/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:3393432/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:2614550/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:4204249/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:1112639/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:1317680/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:647232/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:6971152/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:3119651/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:1660504/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:490526/140‑1 (MQ=255) gCGGCAACCACCGACCAACCAGAAGCTAAAGGCAACTGTTCAGGCGAGCCTCTCGACCTACACAAAGAGTTGACTTTACTGCATTTCCAGGATA‑‑CGC‑C‑CC‑CCCCCCCGCTATTGTGCGCTCATACACTCAAATTAACGAt < 2:7611274/140‑1 (MQ=255) gTATCCACAGACAAACCTGAAGGGAAAGGCATATTGTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑CGC‑C‑CC‑CCCCCTGGCTATTGTGCGATCATACACTCAAATTCAAGATAgg < 2:7444868/140‑1 (MQ=255) ctCCACAGACACACCGGAACGGAAAGCCAGAGGTACAGGCCTTCTTCTCGTCCATCTCACAGAGTTTACATTTCTGCATGTCCCGGATA‑‑C‑A‑C‑CCACCCCCTGGCTATTGTGCGCTCATACACTCAAATCCAAGATAGGtt < 2:8894681/139‑1 (MQ=255) aTCCACAGACAATCCTGAAGGTAAAGGCATCTTTTCAGGCGTGCTGCTCGTCCTTCTCAAAGAGTGTACTTTTCTGCATTTCCTGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATCCACTCAAATTAATGCTAGGtt < 2:124542/140‑1 (MQ=255) aTCCACAGACAAACCTGAAGGGAAAGCCATATTTTCAGGCGTTCTGCTCGACCTTCTCAAAGAGTTTACTTTTATGCATTTCCAGTATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt < 2:4063467/140‑1 (MQ=255) aTCCACAGAAAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt < 2:679731/140‑1 (MQ=255) tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:1466167/134‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCTGGCGTTCTGCTCGTCCTACTCAAATAGTTTACTTTTCTGCTTTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:2224840/140‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:554077/140‑1 (MQ=255) tGAAGGTAAAGGAATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGATTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCg < 1:3271015/140‑1 (MQ=255) aaGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtt < 1:9601732/140‑1 (MQ=255) aaGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtt < 1:8730168/140‑1 (MQ=255) atggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑CGAC‑CCCCCTGGCTATTGTTCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 2:8305763/138‑1 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTgc < 2:4450244/140‑2 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 1:3732081/140‑1 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 1:6125717/140‑1 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 1:7995486/140‑1 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 2:9380173/140‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCTTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:4658348/140‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:3003470/140‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCGGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:834460/140‑1 (MQ=255) atTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 2:1040475/140‑1 (MQ=255) atTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 1:4040232/140‑1 (MQ=255) ttatggCTTTATGTTCTTCCTTATCAATGTTTTTATTTTTATGATTTTCATGGATAATC‑C‑C‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATACATGAGCGTTTTTTGATAGTCTAtt < 2:2514391/136‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 2:8154805/140‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 1:8588758/140‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 2:4264706/140‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCAGACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 1:6205801/140‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TAC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAGAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 2:3792194/140‑1 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt > 2:1823494/1‑140 (MQ=255) gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg < 1:3060805/140‑1 (MQ=255) ttCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATATGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGt > 2:2736029/1‑140 (MQ=255) tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa < 2:7811989/140‑1 (MQ=255) tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa < 1:8210437/140‑1 (MQ=255) tGCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt > 1:7769441/1‑93 (MQ=255) gCATTTCCAGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGGTCTAAATAAATTAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGaa > 1:6032107/1‑140 (MQ=255) aGGATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCa < 1:7450408/140‑1 (MQ=255) gATA‑‑C‑TCC‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCATg < 1:4438397/140‑1 (MQ=255) | TTTTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑‑C‑T‑C‑CC‑CCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCATG > NZ_CP025268/2466776‑2467048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |