| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,862,734 | +T | intergenic (+9/+41) | pphB → / ← ygbI | protein‑serine/threonine phosphatase/DNA‑binding transcriptional repressor YgbI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,862,733 | 1 | . | T | 97.3% | 1410.8 / 23.0 | 372 | intergenic (+8/+42) | pphB/ygbI | protein‑serine/threonine phosphatase/DNA‑binding transcriptional repressor YgbI |
| Reads supporting (aligned to +/- strand): ref base . (3/7); new base T (187/174); total (191/181) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 404 total aligned reads displayed.
CAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAATCTC‑ATG‑C‑TCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTGAT > NZ_CP025268/2862594‑2862866 | caaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑c > 2:2444369/1‑140 (MQ=255)caaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑c < 1:5045848/140‑1 (MQ=255)caaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑c < 1:5301398/140‑1 (MQ=255)caaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑c < 1:5359743/140‑1 (MQ=255) aTAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑c‑ttc > 1:3365854/1‑138 (MQ=255) tAACCGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑c‑ttct < 1:244115/140‑4 (MQ=255) tAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑c‑ttct < 2:6771610/140‑4 (MQ=255) cGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCtg < 2:3933141/140‑1 (MQ=255) ggCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCtgt < 2:5712064/140‑1 (MQ=255) ggCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCtgt < 1:6027648/140‑1 (MQ=255) cgcTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGa > 1:8307942/1‑140 (MQ=255) tGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGc < 1:4957914/140‑1 (MQ=255) tGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGc < 1:4500337/140‑1 (MQ=255) attTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAg < 2:9622682/140‑1 (MQ=255) attTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAg > 1:7525949/1‑140 (MQ=255) tataTTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAAc > 1:2365118/1‑140 (MQ=255) atatatTGACATATGATGATTTATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCAGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAAcc < 2:8566476/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAAcc < 1:5638224/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAAcc < 1:8143636/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAAcc < 1:8899413/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAAcc < 2:3650460/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGAGACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAAcc < 1:6703529/140‑1 (MQ=255) tatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAAccc < 1:3671992/140‑1 (MQ=255) tatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAAccc < 1:7657590/140‑1 (MQ=255) atTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATCAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCg > 2:2296779/1‑140 (MQ=255) ttGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCTgt > 2:7223364/1‑140 (MQ=255) ttcaCATATGATGTTTGATAACATTCAGACGTTCGCTAACCATATTTATATTGATACCGGATCGCCGAACAGCGGTCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGgtg < 2:7008037/137‑1 (MQ=255) ggACATATGATGTATGATAACATTCAGACGTTCGATAACCAGATTTATATTGATACCGGATCGCCGAACAGCTGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAATC‑T‑TCTTCTGTGAAGCATGATGAAACCGgtgt > 2:6354472/1‑140 (MQ=255) atatGATGTTTGATAACATTCAGACGGTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTAtt < 1:2721015/140‑1 (MQ=255) tatGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTg > 2:6258332/1‑140 (MQ=255) tatGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTg < 2:1123519/140‑1 (MQ=255) tatGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTg > 1:1320370/1‑140 (MQ=255) tatGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTg > 2:3759991/1‑140 (MQ=255) tatGATGTTAGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATATTATAAAATAAAGTAGTCTC‑ATG‑CATCTTCTGTGAAGCATGAGTAACCCGGTGTAATTg > 2:1839643/1‑140 (MQ=255) atgatgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGc > 2:4864843/1‑140 (MQ=255) atgatgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGc > 2:9341061/1‑140 (MQ=255) tgatgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCa < 2:5105117/140‑1 (MQ=255) gatgTTTGATAACNTTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGANGCATGAGTAACCCGGTGTTATTGCAg > 1:6259169/1‑140 (MQ=255) gatgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAg > 1:6915606/1‑140 (MQ=255) gatgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAg > 2:4627929/1‑140 (MQ=255) gTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTAGTGCAGGcc > 2:7576641/1‑140 (MQ=255) tttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCa < 1:8421711/140‑1 (MQ=255) tGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCatt > 1:853778/1‑140 (MQ=255) tGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCatt > 1:6162084/1‑140 (MQ=255) agATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGACGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATGAT‑TCTTCTGTGAAGCATGAGTAACCCTGTGTTATTGCAGGACatt > 2:8067650/2‑140 (MQ=255) gATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCatta > 2:9045164/1‑140 (MQ=255) aTAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGGAGGCAattat > 2:7312606/1‑140 (MQ=255) aTAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCattat > 1:4713500/1‑140 (MQ=255) aTAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCattat > 2:1615046/1‑140 (MQ=255) cATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGCTCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCAt > 1:7173408/1‑140 (MQ=255) ttCAGACGTTCGCTAACCAGTTTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCAttt > 2:6104091/1‑140 (MQ=255) gACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCg > 1:401289/1‑140 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATGAT‑TCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 1:7385207/140‑1 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAc > 2:4462805/1‑140 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAc > 1:2066184/1‑140 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCAGGATTCATTTTTCGCGAc > 1:2152666/1‑140 (MQ=255) gtCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAACATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTACCCCGGTGTTATTGCAGGCCAGTATTCATTTTTCGCTAc > 2:4591242/2‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCt > 2:5454161/1‑137 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 2:8359761/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 2:8244343/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATGATTCATTTTTCGCTAcc > 2:7780772/1‑140 (MQ=255) tCGCTAAACAGATTTATATTGATACCGGATCGCCTAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc < 2:4979231/140‑1 (MQ=255) cGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGTGCGGCTGACATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGATTAACCCGGTGTTATTGCGGGCCATTATTCATTTTTCGCTACCa > 1:9780028/1‑140 (MQ=255) cGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCa > 1:9304958/1‑140 (MQ=255) tAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCa < 1:9503908/140‑1 (MQ=255) aCCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCaaa > 1:3948146/1‑140 (MQ=255) ccAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAag < 2:1320370/140‑1 (MQ=255) cAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAaga < 1:7070810/140‑1 (MQ=255) ttATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGAt < 2:339066/140‑1 (MQ=255) tatTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCt > 1:5942182/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 1:3075875/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 2:848825/1‑140 (MQ=255) aCCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTAGTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCAc < 2:425176/140‑1 (MQ=255) cGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCa < 2:9240402/140‑1 (MQ=255) gATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgc < 1:3759991/140‑1 (MQ=255) gATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgc > 1:1502772/1‑140 (MQ=255) tCGCCGACCCGCGCGCGGCTGTCAAGTTATAAAATAAAGTAGTCTC‑ATG‑CTTCGTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCCGCAAAGAGAGATCCTGCTTCACCAgcgc < 2:8055106/140‑1 (MQ=255) gCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgcgc > 2:2089054/1‑140 (MQ=255) cggAACAGCGGGCGGCTGTCATTTTATAAAATACAGTAGTCTC‑ATG‑CTTGTTCTGTGAAGCTTGCGTAGCCCGGTGTTCTTGCGGGCCCTGTTTGATTTTTCGCTACCTGCAAAGAGCGTTCCTGCTTCGCCTgcgcggg > 2:5937228/3‑138 (MQ=255) ccGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGcgcgcg > 1:9051474/1‑140 (MQ=255) gAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGAc < 1:4150658/140‑1 (MQ=255) gcgggctgCTGACATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCa < 2:2503323/140‑1 (MQ=255) gcgggcggCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCa < 1:4865158/140‑1 (MQ=255) gcgggcggCTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCa < 1:1220354/140‑1 (MQ=255) gcgggcggCTGTCATTTTATAAAAGAAAGTAGTCTC‑ATG‑CTTCTTCTGGGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATGATTCATATTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCa < 2:5376799/140‑1 (MQ=255) ggcggcTGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCActc > 2:8189706/1‑140 (MQ=255) tGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGc < 2:4127447/140‑1 (MQ=255) tGTCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGc < 2:3008613/140‑1 (MQ=255) tCATTTTATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACGGGCACTCTCCGGCaa > 1:9207106/1‑140 (MQ=255) ttttATAAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAAcc < 1:9043676/140‑1 (MQ=255) tataAAATAAAGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtc < 2:7683315/140‑1 (MQ=255) taaaataaaGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcgt < 1:1047380/140‑1 (MQ=255) taaaataaaGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcgt < 2:268597/140‑1 (MQ=255) aaataaaGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCAGTCTTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCt > 1:1709181/1‑140 (MQ=255) ataaaGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGAt > 2:7837134/1‑91 (MQ=255) ataaaGTAGTCTC‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGAt < 1:7837134/91‑1 (MQ=255) tagtctc‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTaataat > 1:7714515/4‑140 (MQ=255) tctc‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCCGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTg > 1:5111613/1‑140 (MQ=255) tctc‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATATTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTg > 2:8844249/1‑140 (MQ=255) tc‑ATG‑CTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTGAt > 1:6369489/1‑140 (MQ=255) | CAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAATCTC‑ATG‑C‑TCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTGAT > NZ_CP025268/2862594‑2862866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |