| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,239,247 | (T)6→7 | intergenic (+264/‑18) | ygjR → / → alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,239,241 | 1 | . | T | 97.0% | 1676.0 / 35.2 | 476 | intergenic (+258/‑24) | ygjR/alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Reads supporting (aligned to +/- strand): ref base . (9/5); new base T (195/258); total (205/271) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
Only 100 of 553 total aligned reads displayed.
TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑TTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 | tgtgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCg > 1:5474119/1‑140 (MQ=255)tgtgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCg > 1:2984502/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑tt > 1:1206461/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑tt > 1:8067695/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑tt > 1:8616859/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑tt > 2:6555972/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑tt > 1:1550015/1‑140 (MQ=255) tgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑ttt‑t > 2:4986867/1‑140 (MQ=255) tgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTGTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑ttt‑t > 1:7692893/1‑140 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑ttt‑tttt < 1:4781088/140‑2 (MQ=255) aaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑ttt‑ttttat < 1:7096156/140‑4 (MQ=255) cacaTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTAtgtg > 1:8539513/1‑140 (MQ=255) caTCCGGTCACCGGGCAACCCGCAAGGAATACGCCTCCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGTGGTCTATGCATAACAAGCCGCGGCTGCCGTCTTCCGCCGTTGGCCGTTTT‑TTTATGTGTa < 2:6475992/140‑1 (MQ=255) ggacACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGaa < 2:5286298/137‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGaa < 1:6438517/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGaa < 2:811167/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGaa < 2:4664793/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACt < 2:779895/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACt < 2:9236749/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGGTGGCCGTTTT‑TTTATGTGTAAGGAACt > 1:8391398/1‑140 (MQ=255) ccGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCt < 2:4049590/140‑1 (MQ=255) ccGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCt < 1:170469/140‑1 (MQ=255) ccGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCt < 1:8287308/140‑1 (MQ=255) cGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTa > 1:905118/1‑140 (MQ=255) gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGa < 1:7988135/140‑1 (MQ=255) cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGaa < 2:6326722/140‑1 (MQ=255) aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATa > 1:3310049/1‑140 (MQ=255) aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATa > 2:5118088/1‑140 (MQ=255) cccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATAc < 1:4429291/140‑1 (MQ=255) gAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGt < 1:6843801/140‑1 (MQ=255) gAATACGCAGACTTATTCCTATTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTACTATGAATACTGTCGGCa < 2:1514950/140‑1 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 1:3437901/140‑1 (MQ=255) gAATACGCAGACGTAGTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 2:1301865/140‑1 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc > 1:6979837/1‑140 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc < 2:9340228/140‑1 (MQ=255) cGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGATTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg < 1:4377259/140‑1 (MQ=255) gCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt < 1:396973/140‑1 (MQ=255) aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt > 2:8452272/1‑140 (MQ=255) aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt > 2:1640456/1‑140 (MQ=255) aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt < 2:1860593/140‑1 (MQ=255) aCGTATTCCTTTTTGGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt > 2:303582/1‑140 (MQ=255) aCGTATTCCTTTTGTGTGGGAAGTGAGACCTTGCCGGAAGGCGCGGTCTATGCATTAAAATAAGCGGCTGACGTCTTCCGACGGTGGCCG‑TTTGTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGcg > 2:8951496/1‑139 (MQ=255) ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg > 1:3831355/1‑140 (MQ=255) ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg > 1:2623847/1‑140 (MQ=255) ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTATATGAATACTGTCGGCACGCCGTTGATATggg > 2:7015878/1‑140 (MQ=255) ttttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCgg < 1:5969118/140‑1 (MQ=255) tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa > 2:4187740/1‑140 (MQ=255) tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg < 1:2713787/140‑1 (MQ=255) tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg < 1:1014673/140‑1 (MQ=255) aGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgt > 1:2398943/1‑140 (MQ=255) gTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgtt < 2:6844903/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 1:7608496/140‑1 (MQ=255) aCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGc > 1:4968473/1‑140 (MQ=255) cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCa < 1:137590/140‑1 (MQ=255) gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTa > 1:4865919/1‑140 (MQ=255) gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCGATGGGGCGGATTCGCTGTTGTTGTCGCCATTa > 2:2757101/1‑140 (MQ=255) cGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATg < 2:391818/140‑1 (MQ=255) gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCt < 2:740703/140‑1 (MQ=255) gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCt < 2:3397811/140‑1 (MQ=255) ggCGAGGTCTATGCATAAAAAGCAGAGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCAGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGc > 2:3187908/1‑140 (MQ=255) cGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTa < 1:2259848/140‑1 (MQ=255) gAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑TTTGTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTAt < 2:4837582/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 1:6656645/140‑1 (MQ=255) tCTAGGCATACAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGACCTTCTATGAAGACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 2:7983692/140‑1 (MQ=255) ctctGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCGATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAcc < 2:7639560/137‑1 (MQ=255) aTGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGGTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtg < 2:2102415/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGCACTTCTATGACTACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt < 2:6677857/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt > 1:8924117/1‑140 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt < 1:4689154/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGGTGTTGTCGCCCTTATGCTGGCTATCGACCtgt > 1:72862/1‑140 (MQ=255) aaaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGttgttg > 1:9163314/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACGTCTATGAATACTGTCGGCACGCCGGTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCGGGTGTTGc > 1:4176192/1‑140 (MQ=255) aaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCa > 1:6203945/1‑140 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg < 1:5269870/140‑1 (MQ=255) gcGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 2:4310970/140‑1 (MQ=255) cGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGGACGCCGTTGCTATGGGGCGGATTCGCTGTTGGTGTAGCCATTATGCTGGCTATCGTCCTGTTGTTGAAGGGGcgt > 1:9736253/1‑140 (MQ=255) cGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcgt > 1:4055416/1‑140 (MQ=255) cGGCTGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCGGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcgt > 1:7358836/1‑140 (MQ=255) tgccgtcgtCCGACGGTGGCCGATTC‑TTTATGTGTAAGGAACTTCGAGGACGCCGGTCGGCACGCCGGTGCTATGGGGCGGAGTCGCGGTTGTTGTCGCCAGTATGCGGGCTCTCGACCTGTTGTTGCAGGGGCGTCGTg < 2:8805788/137‑1 (MQ=255) tGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTATGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 2:9621733/140‑1 (MQ=255) tGACGTCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 1:5061776/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGCACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATGCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:1960987/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:9343410/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:9641540/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:7132137/140‑1 (MQ=255) gtCCGACGGTGGCCGTTTT‑TTTATGTGTAAGGAACGTCTATGAATACGGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGcaca < 2:3632859/139‑1 (MQ=255) tCCGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACAt > 2:5547913/1‑140 (MQ=255) ccGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 1:6515677/1‑140 (MQ=255) ccGACGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 2:7129995/1‑140 (MQ=255) ccGACGTTGGCCGATTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAAGCCGTTGCTATGGGGCGGATTCGCTGTAGTTGTCGCAATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 2:5961862/1‑140 (MQ=255) aCGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGcca < 1:9245831/140‑1 (MQ=255) aCGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCGGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGcca < 2:2908038/140‑1 (MQ=255) cGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 1:5677034/140‑1 (MQ=255) cGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:5250111/140‑1 (MQ=255) cGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:2398943/140‑1 (MQ=255) cGTTGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat > 1:3076300/1‑140 (MQ=255) tGGCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgac > 1:9439429/1‑140 (MQ=255) ggCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc < 2:1045741/140‑1 (MQ=255) ggCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc < 1:4517058/140‑1 (MQ=255) ggCCGTTTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc < 1:1827787/140‑1 (MQ=255) | TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑TTT‑TTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |