| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 1,762,571 | +CTGGT | pseudogene (969/1000 nt) | ldtE ← | L,D‑transpeptidase LdtE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 1762570 | 3 (0.010) | 523 (0.940) +TCTGG |
124/262 | 0.3 | 99.5% | pseudogene (970/1000 nt) | ldtE | L,D‑transpeptidase LdtE |
| ? | NZ_CP025268 | 1762571 = | 3 (0.010) | pseudogene (969/1000 nt) | ldtE | L,D‑transpeptidase LdtE | |||||
Only 100 of 556 total aligned reads displayed.
TGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTTTA > NZ_CP025268/1762431‑1762709 | cacCAGCGTCGGGACACCATGGCTACTACAGACCGCAAGTAATAGTCCCTGTGAAGTGAAAAATGGCGCTCAGTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCGACTGCGTCACGCGTACCATATTCC‑‑‑‑CT‑TGCtctg < 2:8804818‑M1/139‑5 (MQ=255) aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTATCATATTCC‑‑‑‑CT‑TGCtctg < 1:4675320‑M1/140‑5 (MQ=255) aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctg < 2:9193490‑M1/140‑5 (MQ=255) aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctg < 2:8711628‑M1/140‑5 (MQ=255) ccAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggt > 1:8302307‑M1/1‑134 (MQ=255) cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcac > 2:7195896‑M1/1‑130 (MQ=255) cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctgggtctc > 1:5199155‑M1/1‑130 (MQ=255) cTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccat > 2:2393763‑M1/1‑127 (MQ=255) tGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccatt < 1:7322589‑M1/140‑15 (MQ=255) ggACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattc > 2:1585459‑M1/1‑125 (MQ=255) ggACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattc > 1:2790882‑M1/1‑125 (MQ=255) caacaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgc < 1:5929392‑M1/140‑19 (MQ=255) acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgc < 2:9703864‑M1/140‑21 (MQ=255) acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgc > 2:3868259‑M1/1‑120 (MQ=255) acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgc < 2:4252972‑M1/140‑21 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgct > 1:4908377‑M1/1‑119 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgct > 2:2849293‑M1/1‑119 (MQ=255) tGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctga > 1:6969572‑M1/1‑117 (MQ=255) tGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctga > 1:8587081‑M1/1‑117 (MQ=255) ctaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctac > 1:2442569‑M1/1‑111 (MQ=255) aaaTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TTCtctggttcaccattctgcgctgactctactg > 2:8542445‑M1/1‑109 (MQ=255) tACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaag > 1:8971937‑M1/1‑106 (MQ=255) ccGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggc > 1:1008931‑M1/1‑104 (MQ=255) cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgca > 2:4312085‑M1/1‑101 (MQ=255) cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggtcaccattctgcgctgactctactgaaggcgcat > 2:8157492‑M1/1‑101 (MQ=255) aaTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgtaggcgcattgct > 1:4788782‑M1/1‑96 (MQ=255) aCCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgc > 2:6466319‑M1/1‑90 (MQ=255) aCCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgc < 1:5754354‑M1/140‑51 (MQ=255) aCCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgccgactctactgaaggcgcattgctggctgc < 2:830630‑M1/140‑51 (MQ=255) ccTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcg > 1:4133315‑M1/1‑89 (MQ=255) tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg < 1:3830490‑M1/140‑54 (MQ=255) gtgaagtgaaAAATGGCGCACCTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 1:5486756‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACTTATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgcgtctactgtagtcgcagtgctggctgcggga > 2:6542002‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 2:3641633‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 1:798084‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 2:1357610‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 1:4099111‑M1/1‑86 (MQ=255) gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CG‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga > 2:409146‑M1/1‑86 (MQ=255) tgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggag > 1:3228907‑M1/1‑85 (MQ=255) tgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggag > 1:2409811‑M1/1‑85 (MQ=255) ggagtgaaaaATGGCGCACATTGGGCGCCCGTGTTTTTGTCTGCCGTTGACCGCTACTGCGTCACGCGTAACCTCTTCC‑‑‑‑CT‑TGCgctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagt > 2:4953953‑M1/3‑84 (MQ=255) gaagtgaaAAATGGCGCACATTGTGCGCCAATTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagt < 1:6714926‑M1/140‑57 (MQ=255) tgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcacccttgtgcgctgtctcttctgaaggcgcgttgctgtctgcgggagttgcg > 2:1010738‑M1/1‑80 (MQ=255) cacaTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctgggtcaccattctgcgctgactctactgaaggcgcattgctggctgcgggaggtgctccactgctcacc > 1:6103188‑M1/1‑68 (MQ=255) acaTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg < 2:6586872‑M1/140‑74 (MQ=255) caTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccga < 1:1677614‑M1/140‑75 (MQ=255) aTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa < 1:8853605‑M1/140‑76 (MQ=255) aTTGTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACAAATTCC‑‑‑‑CT‑TGCtctgggtcaccattctgcgctgactctactgaaggcgcattgcgggctgcgggagttgctccacggctcaccgaaaccggctccc > 2:5997324‑M1/1‑55 (MQ=255) tttatttGTCTGCCGTTTACCGCTACTTCGTCACGCGAAACATATACCATATCTCTCGTTCACCATACAGCGCTGACTAAAATGAACTCGCAATGCTGGCTGCGGGAGTTGCACCACAGCTACCCGAAACCGCAtccact > 2:4790448/1‑135 (MQ=255) ttttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctg < 2:1112920‑M1/140‑89 (MQ=255) ttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcc < 2:5815717‑M1/140‑91 (MQ=255) tGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga < 1:3621051‑M1/140‑94 (MQ=255) gTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgac > 1:542227‑M1/1‑46 (MQ=255) gCCGTTGACCGCTCCGGCGTCACGCGTCACATAGTCG‑‑‑‑CG‑TGCtcggggtcaccattctgcgcttactctactgaaggcgcattgcaggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgata < 2:2046789‑M1/140‑99 (MQ=255) gctacTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgcttta < 2:811403‑M1/138‑109 (MQ=255) ctaCTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttat < 2:7502942‑M1/139‑110 (MQ=255) ctaCTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttat > 1:302376‑M1/2‑31 (MQ=255) ctaCTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctaatgaaggcgcattgctggctgcgggagttgctccactgctcaccga < 2:700405‑M1/104‑75 (MQ=255) cTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgt > 2:2666144‑M1/1‑28 (MQ=255) cTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcga > 2:9234751‑M1/1‑28 (MQ=255) gCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgact < 2:3088119‑M1/140‑115 (MQ=255) gCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgact < 2:7978345‑M1/140‑115 (MQ=255) gCGTCACGCGTAACATATTCC‑‑‑‑CG‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgact < 2:5536655‑M1/140‑115 (MQ=255) cGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgacta > 2:3772202‑M1/1‑25 (MQ=255) gTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaaagatttatcgactaa > 2:4536258‑M1/1‑24 (MQ=255) tCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaac > 2:2205321‑M1/1‑23 (MQ=255) aCGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaactg > 2:7832934‑M1/1‑21 (MQ=255) cgcgTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttc > 1:8100851‑M1/1‑20 (MQ=255) cgcgTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttc > 1:4449283‑M1/1‑20 (MQ=255) cgcgTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttc > 1:704056‑M1/1‑20 (MQ=255) cgcgTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttc > 1:8423540‑M1/1‑20 (MQ=255) cgcgTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttc > 2:2298943‑M1/1‑20 (MQ=255) gcgTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttct < 1:2022941‑M1/140‑122 (MQ=255) gcgTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttct < 2:6873543‑M1/140‑122 (MQ=255) cgTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaatgcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctg > 1:15089‑M1/1‑18 (MQ=255) aaCATATTGC‑‑‑‑CT‑TCCtctggttcaccattctgcgctgactctacagaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatc > 1:6335207‑M1/1‑15 (MQ=255) cATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 1:9167525‑M1/140‑128 (MQ=255) cATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 2:35468‑M1/140‑128 (MQ=255) cATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatcta < 2:9553810‑M1/140‑128 (MQ=255) tCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagcc > 2:9426514‑M1/1‑8 (MQ=255) tCC‑‑‑‑CT‑GGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagcg > 2:5311629‑M1/1‑8 (MQ=255) t‑tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 2:1909501‑M1/140‑137 (MQ=255) t‑tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 1:6499878‑M1/140‑137 (MQ=255) t‑tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttat < 1:2079866‑M1/140‑137 (MQ=255) tGCtctggttcaccattctgcgctgactctactgacggcgcattgctggctgcgggagttgctccactgctcaccgaatccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttttt > 2:6701011‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:1253770‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:1307142‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:7669060‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:1134266‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:9803499‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:746622‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 2:6203511‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 2:5095392‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:530193‑M1/1‑3 (MQ=255) tGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttatt > 1:5067654‑M1/1‑3 (MQ=255) gCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttattg > 1:9389843‑M1/1‑2 (MQ=255) gCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttattg > 1:2217461‑M1/1‑2 (MQ=255) gCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcga < 1:3417430‑M1/114‑113 (MQ=255) gCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcga > 2:3417430‑M1/1‑2 (MQ=255) ctctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaacgctttatcgactaacttctgatctacagccttattgt > 1:433360‑M1/1‑1 (MQ=255) | TGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGCTTTATCGACTAACTTCTGATCTACAGCCTTATTGTCTTTA > NZ_CP025268/1762431‑1762709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |