BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	695911 =	0 (0.000)	298 (0.570) +GAAGAAACAATC	50/250	4.4	56.6%	intergenic (‑33/+2)	CXP41_RS03680/CXP41_RS03685	tRNA‑Gln/tRNA‑Gln
*	?	NZ_CP025268	= 696182	502 (0.870)	298 (0.570) +GAAGAAACAATC	50/250	4.4	56.6%	intergenic (‑1/+379)	CXP41_RS03695/asnB	tRNA‑Met/asparagine synthase B
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 504 total aligned reads displayed.

CTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTCG  >  NZ_CP025268/696043‑696321

caagcggcgCCATAACCAAAATCTGGTAAGTCAACCAATTTCGCCAATCACTCAAAAACATAACTTGTCAAAGACTTCATACCAACCTCTGACACCAAAAATAATAGTTATGTGCTCTAACCAACTGAGCTACGTAGCCa                                                                                                                                              >  2:482152/4‑140 (MQ=255)

  tGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATc                                                                                                                                            >  2:8557139/1‑140 (MQ=255)

  tGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATc                                                                                                                                            >  2:7903316/1‑140 (MQ=255)

  tGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATc                                                                                                                                            >  1:8627041/1‑140 (MQ=255)

    cggcgCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑tt                                                                                                                                         >  2:1666837/1‑140 (MQ=255)

        gcCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑tttttt                                                                                                                                     >  1:4803307/1‑140 (MQ=255)

         ccAGCACCTACATCTGTTGGGTCTACCAATTTCGCCACTCCCGAAAAAAAAGATGGTGGCTCCGACGGGCTGCGAACCTGTGACCCCATCATTATGCGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑ttaattt                                                                                                                                    <  2:2969694/140‑6 (MQ=18)

          cAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑tttttttt                                                                                                                                   >  2:1076303/1‑140 (MQ=255)

          cAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑tttttttt                                                                                                                                   >  2:5331166/1‑140 (MQ=255)

             aaacTAAATCTGGTTCGTCTACCATTTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTcgc                                                                                                                                <  1:8054764/137‑1 (MQ=255)

                       tGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTcgc                                                                                                                                <  1:3130078/130‑1 (MQ=255)

                         gTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCg                                                                                                                    >  1:3744964/1‑140 (MQ=255)

                              tCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGtt                                                                                                               >  2:8873245/1‑140 (MQ=255)

                              tCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTAGCGATACCTTATCGGCGtt                                                                                                               >  2:7831934/1‑140 (MQ=255)

                               cTACCAAGTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTg                                                                                                              <  2:9556749/140‑1 (MQ=255)

                                ccccAATATCGCCACTCCCGCACAAAAAGATGGGGCCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGc                                                                                                             <  2:6510709/138‑1 (MQ=25)

                                 aCCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑‑TTTTTTTCGCGATACCTTATCGGCGTTGCgg                                                                                                           <  2:3088432/140‑1 (MQ=255)

                                  ccAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCgg                                                                                                           <  1:7867444/140‑1 (MQ=255)

                                  ccAATTTCGCCACTCCCGCAAAAAAAGATGGTGGATACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCTTC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCgt                                                                                                           <  2:1179704/140‑2 (MQ=255)

                                   cAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCggg                                                                                                          >  1:488780/1‑140 (MQ=255)

                                   cAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCGACGTAGCCATC‑TTTTGTTTCGCGATACCTTATCGGCGTTGCggg                                                                                                          >  1:744847/1‑140 (MQ=255)

                                   cAATTGCGCCACTCCCGAAAAAACAGAGGGGGGCTACGACGGGATTCGAACCTGTGACACCATCATTCTGAGTGCTGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTGTTTTTCGCGCGACCTTATCGGCGTTGCggg                                                                                                          <  2:4495834/140‑1 (MQ=18)

                                    actttCGACACTCCCGCTAAAAAACATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCgggg                                                                                                         <  2:3161490/138‑1 (MQ=255)

                                        tCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCa                                                                                                     >  2:6000130/1‑140 (MQ=255)

                                         cGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt                                                                                                    <  1:8252116/140‑1 (MQ=255)

                                         cGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt                                                                                                    <  2:2164424/140‑1 (MQ=255)

                                           ccACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTa                                                                                                  >  1:4579567/1‑140 (MQ=255)

                                            cACTCCCGCAACATAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTAt                                                                                                 <  2:740952/140‑1 (MQ=255)

                                            cACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTAt                                                                                                 <  2:137395/140‑1 (MQ=255)

                                                   gCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGtata                                                                                          <  1:6491905/140‑1 (MQ=255)

                                                   caataataaGTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGtata                                                                                          <  2:700119/133‑1 (MQ=255)

                                                      aaaaaaGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATagag                                                                                       <  1:1126514/140‑1 (MQ=255)

                                                           aGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTg                                                                                  <  1:7059097/140‑1 (MQ=255)

                                                           aGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTg                                                                                  <  1:936939/140‑1 (MQ=255)

                                                             aTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCa                                                                                <  1:7760503/140‑1 (MQ=255)

                                                                 tggCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGt                                                                            >  2:3392460/1‑140 (MQ=255)

                                                                                 cGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAg                                                            <  1:9132895/140‑1 (MQ=255)

                                                                                    aCCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGaa                                                         >  1:7845131/1‑140 (MQ=255)

                                                                                        gtgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAAtt                                                     >  1:3640934/1‑140 (MQ=255)

                                                                                         tgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTg                                                    >  2:9129435/1‑140 (MQ=255)

                                                                                         tgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTg                                                    >  1:579352/1‑140 (MQ=255)

                                                                                            ccccATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTc                                                 <  1:3067667/140‑1 (MQ=255)

                                                                                            ccccATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGAGACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTc                                                 <  2:2400798/140‑1 (MQ=255)

                                                                                              ccATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGa                                               <  2:7660123/140‑1 (MQ=255)

                                                                                                atcatTATGAGTGATGTGCTCTCACCAACTGAGCTACGTAGCCATC‑TTTTGTTTCGCGCTACCTTATCGGCGTTGCGGGGCGCAGTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCATGGAAAATTGATCGaaa                                             >  1:4702193/1‑140 (MQ=38)

                                                                                                atcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGaaa                                             >  1:1267394/1‑140 (MQ=255)

                                                                                                   atTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTg                                          <  1:251015/140‑1 (MQ=255)

                                                                                                   atTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTg                                          <  2:675568/140‑1 (MQ=255)

                                                                                                    ttATGAGTGATGTGCTCTAACCAACTGATCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGa                                         <  2:3688919/140‑1 (MQ=255)

                                                                                                    ttATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGa                                         >  1:5448498/1‑140 (MQ=255)

                                                                                                     tATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGa                                         >  1:2685646/1‑140 (MQ=255)

                                                                                                     tATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGAc                                        <  1:3392460/140‑1 (MQ=255)

                                                                                                      aTGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCGCGAAAGTGACt                                       >  1:1581767/1‑140 (MQ=255)

                                                                                                      aTGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTACGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACt                                       <  1:7224357/140‑1 (MQ=255)

                                                                                                       tGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTg                                      >  1:2885714/1‑140 (MQ=255)

                                                                                                       tGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTg                                      >  1:9078492/1‑140 (MQ=255)

                                                                                                        gAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTg                                      <  1:1388342/140‑1 (MQ=255)

                                                                                                          gTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGttt                                   >  1:5676335/1‑140 (MQ=255)

                                                                                                            gATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTgg                                 >  2:282012/1‑140 (MQ=255)

                                                                                                            gATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTgg                                 >  2:5016530/1‑140 (MQ=255)

                                                                                                             aTGTGCTCTAACCAACTGAGCTACTTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTGTGGt                                >  2:4921438/1‑140 (MQ=255)

                                                                                                             aTGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGt                                >  2:381839/1‑140 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  2:4666093/140‑1 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               >  2:8119373/1‑140 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  2:5964462/140‑1 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  2:4596582/140‑1 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  1:8838149/140‑1 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  1:9649130/140‑1 (MQ=255)

                                                                                                                  ctctAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGt                           >  1:2142187/1‑140 (MQ=255)

                                                                                                                  ctctAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGt                           >  2:837942/1‑140 (MQ=255)

                                                                                                                  ctctAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGt                           >  2:6189743/1‑140 (MQ=255)

                                                                                                                   tctAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAGTATGCGTATAGAGCCTTGCAGCTTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGtt                          >  2:1844952/1‑140 (MQ=255)

                                                                                                                       aCCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGt                                                                            <  1:1003142/86‑1 (MQ=255)

                                                                                                                       aCCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGa                      >  1:428038/1‑140 (MQ=255)

                                                                                                                        ccAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGaa                     <  2:3998763/140‑1 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCCTC‑TTTTTTGGCGCGATACCTGATCGGCGATGCTGGGCGCAGTATGCGTATAGAGCCTTGCAGCGTCATCCTCTGTTTCAAGGAAAATTGCTCGCAAGTGACGGTGTGGTTAGGGTGCGAACTGc                 >  2:4130690/1‑140 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAATGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAAAAGc                 >  2:5463169/1‑140 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGc                 >  1:5087758/1‑140 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTTCGGGGCGCATTATGCTTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTTCTCGAAAGTTACTGTTTGGGTCGGTGGAGACCAGCg                >  2:6323325/1‑140 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  2:5812824/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  2:2282158/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  1:7576013/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  1:5265529/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  1:3957515/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  1:6204026/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  1:9568949/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  1:3268073/140‑1 (MQ=255)

                                                                                                                               aGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTg              >  1:5956986/1‑140 (MQ=255)

                                                                                                                               aGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTg              <  2:6463636/140‑1 (MQ=255)

                                                                                                                                 cTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGgc            >  1:6877878/1‑140 (MQ=255)

                                                                                                                                 cTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGgc            >  1:1936630/1‑140 (MQ=255)

                                                                                                                                  tACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTCTGCGTATAGAGCCTTGCAGCGTCAACCTCATTTTCACGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGgcg           <  1:1812635/140‑1 (MQ=255)

                                                                                                                                  tACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGgcg           <  2:9677610/140‑1 (MQ=255)

                                                                                                                                    cGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCt         >  2:6618242/1‑140 (MQ=255)

                                                                                                                                    cGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCt         >  1:4328161/1‑140 (MQ=255)

                                                                                                                                     gTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCta        <  2:510798/140‑1 (MQ=255)

                                                                                                                                       aGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCtata      <  2:2570818/140‑1 (MQ=255)

                                                                                                                                          cATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTc   <  1:6734924/140‑1 (MQ=255)

                                                                                                                                           aTC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGa                                         <  2:9249641/101‑1 (MQ=255)

                                                                                                                                           aTC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTCg  <  2:833875/140‑1 (MQ=255)

CTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATC‑TTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTCG  >  NZ_CP025268/696043‑696321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.