BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	1292725 =	537 (0.930)	169 (0.350)	55/232	3.3	39.0%	intergenic (+182/+2)	narI/CXP41_RS06830	respiratory nitrate reductase subunit gamma/RtT sRNA
*	?	NZ_CP025268	= 1293258	74 (0.150)	169 (0.350)	55/232	3.3	39.0%	intergenic (‑44/+3)	CXP41_RS06840/CXP41_RS06845	RtT sRNA/tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 152 total aligned reads displayed.

CGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGG  >  NZ_CP025268/1293120‑1293391

cGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCTGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTg                                                                                                                                      <  2:3312866/140‑1 (MQ=255)

 gCCCTTCGGGTCGTTGCCTGCGGCAANGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGNCTTTTGAAAGTGa                                                                                                                                     <  1:6261290/140‑1 (MQ=255)

 gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                     <  1:7794901/140‑1 (MQ=255)

 gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                     <  2:1287751/140‑1 (MQ=255)

 gCCCGTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCGGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAACGTGa                                                                                                                                     <  1:9754997/140‑1 (MQ=11)

 gCCCGTCGGGGCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGACGAACCTTTGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                     <  2:7834241/140‑1 (MQ=11)

   ccgtCGGGTCGGTGCCTGCGGCACCGCTCTCTCGCTGACGCTCGTGCCGAACCTTAGTCGAAGCGTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGATATTGAtg                                                                                                                                   <  2:8329857/137‑1 (MQ=11)

   ccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                   <  1:2183421/140‑1 (MQ=255)

   ccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                   <  2:3089689/140‑1 (MQ=255)

   ccTTCGGGTCGGTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                   <  2:3252647/140‑1 (MQ=255)

    cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                  <  1:2625983/140‑1 (MQ=255)

    cTTCGGGTAGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                  <  2:2006295/140‑1 (MQ=255)

      tCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCCGGATGTTTGATTGCGGAGTCGCGTGTGAGTTGAGGGCGGGTTGAAAgtggtggtg                                                                                                                                >  1:7891550/1‑140 (MQ=11)

      tCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtg                                                                                                                                <  2:9611932/140‑1 (MQ=255)

        gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                              <  1:1314060/140‑1 (MQ=255)

        gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                              <  2:1756674/140‑1 (MQ=255)

        gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                              <  2:1456278/140‑1 (MQ=255)

        gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                              <  1:9209113/140‑1 (MQ=255)

        gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGACGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                              <  1:9656405/140‑1 (MQ=255)

           tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                           <  1:3596208/140‑1 (MQ=255)

             gctGCCTGCGGCTACGCTCTCTCTCTGACGATCGTGCCGACACTTTCTCGAAGGTTCTCATCCTTCCCCGCTTGGGCAGATTCTTTGATTTCGTAGTCGCTTGAGAGTTCCGTGAATTTTGCAAGTGATGGTGGTggggg                                                                                                                         <  1:3637512/138‑1 (MQ=2)

             gTTGCCTGCGGCTACGCTCTCTCGCTGACGCTCGAGCCTAAACTTAGTCGTAGCTTCTCATCCTTCCCCGCTTGGGCAGATTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  1:9101426/140‑1 (MQ=11)

             gTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTCGTCGAAGCTTCTCCTCCTTCCCCGCCTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGAATTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  2:4138363/140‑1 (MQ=11)

             gTTGCCTGCGGCAACGCTCTCTCGCTGTCGCGCGAGCAGAACCTTAGTCGAAGCGTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  2:372358/140‑1 (MQ=11)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  2:6751919/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCATATTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  1:6517252/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGTATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  2:2411678/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGATTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  1:8275838/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  1:1079685/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  1:5418699/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  2:8191321/140‑1 (MQ=255)

             gTTGCATGCGGCAACGCTCTCTCGCTGTCGCTCGATCCGAACCTTAGTCGAAGATTCTCATCCTTCCCCGCTGGGGCAGAATTTTTGATTGATGATTCGATAGAGTGTTCATGGACTTTAGAAAGTGATGGTGGTggggt                                                                                                                         <  2:7086260/140‑2 (MQ=11)

             cgagCCAGCGGCAACCCCCTCTCGCGCCCGCACGCGCCGAACCCGCGACGAAGCTTCTCATCCTTCCCCGCCGGGGCAGAATAGTTGATTGCGCAGTCGATTGAGCGTTAACGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         <  2:6269550/137‑1 (MQ=2)

                 ccTGCGGCAACGCTCTCTCGCTGACGCTCTAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAgg                                                                                                                     <  1:4581280/140‑1 (MQ=255)

                  cTGCGGCAACGCTCTCTCGCTGTCGCTCTAGTCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGATTGAGATTTCAGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                    <  2:4432476/140‑1 (MQ=11)

                  cTGCGGCAACGCTCTCTCGCTGTCGCTCTAGCCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                    <  1:8023395/140‑1 (MQ=11)

                  cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                    <  1:8251673/140‑1 (MQ=255)

                  cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                    <  2:5806084/140‑1 (MQ=255)

                  cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                    <  1:2083422/140‑1 (MQ=255)

                  cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                    <  2:6757421/140‑1 (MQ=255)

                       gCAACGCTCTCTCGCTGACGCTCGCGCCGCACCGTGGTCGAAGCGTCGCCTCCTTCCCCGCATTGGCAGAAGACATGATTCCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                               <  2:6569273/140‑4 (MQ=11)

                       gCAACGCGCTCTCGCTGCCGCTCGAGCCGAACCTTCGTCGCCGCTTCGCCTCCTTCCCCGCATGGGCAGAATATTTGCTGGCGGATTCGCTTGAGAGTTCAGGGCCGTTTGAAAGTGATGGTGGTGGGGGCAGGAttact                                                                                                               <  2:5700337/140‑4 (MQ=11)

                           cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                         >  2:9499121/1‑126 (MQ=255)

                           cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttactcagc                                                                                                           >  2:71322/1‑133 (MQ=255)

                                           cTCGCGCCGAACCTCAGTCGAAGCTTCTCCTCCTTCCCCGCATGGGCAGAATCTTTGATTGCGGATTCGCTTGCGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACgg                                                                                           <  1:4601036/140‑1 (MQ=18)

                                             cGAGCCGAACCTTCGTCGAAGCTTCTCAGCCTTCCCCGCATGGGCAGACTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCa                                                                                         <  1:6550213/140‑1 (MQ=255)

                                               aGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGt                                                                                                                                       >  2:7587358/1‑92 (MQ=255)

                                               aGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGt                                                                                                                                       <  1:7587358/92‑1 (MQ=255)

                                                                aGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGACCCTTCGAAGTCGATGACGGAAGATGTACAGTCTGCTCCCt                                                                      >  2:3505982/1‑140 (MQ=17)

                                                                         tCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtgg                                                                                                                               >  1:4742395/1‑74 (MQ=255)

                                                                         tCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtgg                                                                                                                               <  2:4742395/74‑1 (MQ=255)

                                                                             tCCCCGCTTGGGCAGAATAATTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCggg                                                         <  1:5565976/140‑1 (MQ=21)

                                                                                ccGCTTGGGCAGAATATTTATTTGCGGATTCGTTTGAGATTTCCGGGAATTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                      <  2:3093127/140‑1 (MQ=18)

                                                                                    aTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggt                                                                                                                                 <  1:1925753/61‑1 (MQ=255)

                                                                                    aTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggt                                                                                                                                 >  2:1925557/1‑61 (MQ=255)

                                                                                      gggCAGAATATTTTATTGCGGATTCGATTGATACTTCCGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccacc                                                <  2:8330320/140‑1 (MQ=18)

                                                                                       tgCAGTATATTTTATTGCGGATTCGTGTGTTTTGTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccacca                                               <  2:9096896/139‑1 (MQ=14)

                                                                                                        cGGATTCGTTGGTGATTTCCGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAAtttt                              <  1:3505982/140‑1 (MQ=18)

                                                                                                        cGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTAAAGTCTACACCAATTTGCCGCACGGCAACAACACCAGGGGTAATTCAAAtttt                              >  2:5018865/1‑140 (MQ=18)

                                                                                                               gttgtgaagTTCATTGTCTTATGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTaa                       <  1:5811404/133‑1 (MQ=17)

                                                                                                               gttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTaa                       <  1:6904143/133‑1 (MQ=255)

                                                                                                               gttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTaa                       >  2:659089/8‑140 (MQ=255)

                                                                                                                ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                      <  2:5195167/134‑1 (MQ=255)

                                                                                                                 tgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATg                     <  1:3406954/135‑1 (MQ=255)

                                                                                                                   ggacgTTCAGTGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCGTCGAAGTCGATGACGGCAGATTTACAGACTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAAATTTGAGGTAATGCt                   <  2:6802486/136‑1 (MQ=18)

                                                                                                                   ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                   <  2:6226420/137‑1 (MQ=255)

                                                                                                                   ggaagTTCAGGGACATTTGAAAGTGATGGTGGGGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                   <  1:980452/137‑1 (MQ=255)

                                                                                                                    gaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCtt                  <  2:9790167/138‑1 (MQ=255)

                                                                                                                    ccagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCtt                  <  2:1678542/138‑1 (MQ=255)

                                                                                                                     aagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTg                 <  2:2830471/139‑1 (MQ=255)

                                                                                                                       gTTCTGGGACTTTTGTAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGAGGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgag               <  2:2751364/140‑1 (MQ=255)

                                                                                                                       gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgag               >  1:1064403/1‑140 (MQ=255)

                                                                                                                       gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGACTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGTGGTAATTCAAATTTTGAGGTAATGCTTgag               <  1:1722344/140‑1 (MQ=255)

                                                                                                                        ttCAGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGTAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAATTTTTGAGGTAATGCTTgaga              <  2:9570318/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgata              <  1:1150629/140‑3 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga              <  1:5524117/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga              <  1:9189836/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga              <  2:3759651/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga              <  1:9715238/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga              <  2:6796311/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga              >  1:1794117/1‑140 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga              <  1:5524080/140‑1 (MQ=255)

                                                                                                                         tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAt             <  1:4628996/140‑1 (MQ=255)

                                                                                                                          cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAATTTTTCAGGTAATGATTGACAtt            >  1:624207/1‑139 (MQ=255)

                                                                                                                          cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg            <  2:7247897/140‑1 (MQ=255)

                                                                                                                          cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg            >  2:7291820/1‑140 (MQ=255)

                                                                                                                          cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg            >  2:2243164/1‑140 (MQ=255)

                                                                                                                          cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg            <  2:9289379/140‑1 (MQ=255)

                                                                                                                          cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg            <  2:9114549/140‑1 (MQ=255)

                                                                                                                             ggACTTTTGAAAGTGAGGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtg         <  2:4778442/140‑1 (MQ=255)

                                                                                                                               aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTGATTCAAATTTTGAGGTAATGCTTGAGAtggtggt       <  1:5952012/140‑1 (MQ=255)

                                                                                                                               aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggt       <  2:3304927/140‑1 (MQ=255)

                                                                                                                                 ttttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCTGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggtgg     <  2:5653104/140‑1 (MQ=255)

                                                                                                                                  tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGCAGTCGATGACGGCAGATTTACCGTCTGCTCCCTTTGGCCGCGCGGGAACCCCACCAGGGGTAATTGAAAGTTTGAGGAAATGGAGGTGATGGTgggggg    >  2:7977331/1‑140 (MQ=17)

                                                                                                                                  tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg    >  1:8701953/1‑140 (MQ=255)

                                                                                                                                   ttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTTATGCTTGAGATGGTGGTgggg   <  1:9056416/140‑1 (MQ=255)

                                                                                                                                    tGAAAGTGATGGTGGTTGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg  <  1:5467144/140‑1 (MQ=255)

                                                                                                                                    tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg  <  1:9376741/140‑1 (MQ=255)

                                                                                                                                    tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg  <  2:2476966/140‑1 (MQ=255)

                                                                                                                                    tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCATTGGCCGCTCGGTAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg  <  1:7063201/140‑1 (MQ=255)

CGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGG  >  NZ_CP025268/1293120‑1293391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.