BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	2,175,437	A→G	388 (TAA→TAG)	CXP41_RS11550 →	IS3‑like element IS3 family transposase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	2,175,437	0	A	G	100.0%	976.2 / NA	295	388 (TAA→TAG)	CXP41_RS11550	IS3‑like element IS3 family transposase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (175/120); total (175/120)

Only 100 of 295 total aligned reads displayed.

CGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAAGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTT  >  NZ_CP025268/2175330‑2175573

cGGGCAACGGTGATTCATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGt                                                                                                          <  2:7458688/140‑1 (MQ=9)

 gggCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTc                                                                                                         >  1:1344866/1‑140 (MQ=17)

  ggCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCa                                                                                                        <  1:4608293/140‑1 (MQ=18)

   gCAACGGTGTTTAATTATATCGAATGTGATTACTATCGGTGTCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCTGAACAATTTGTAATCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTTGGTAGGTTCAGTCAt                                                                                                       <  1:3476009/140‑1 (MQ=11)

   gCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCAt                                                                                                       <  1:4832135/140‑1 (MQ=18)

    cAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATc                                                                                                      <  2:7708532/140‑1 (MQ=21)

    cAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATc                                                                                                      <  2:5416780/140‑1 (MQ=21)

             ttAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTgg                                                                                             <  1:1356417/140‑1 (MQ=255)

             ttAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTgg                                                                                             <  2:3793787/140‑1 (MQ=255)

              tAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGa                                                                                            <  2:9021463/140‑1 (MQ=255)

                aTTATATCGAATGTGATTCCAATCGGGGGCGGCGGCACAGTGGGTGTGGCGGCCTCAGTCCGGAACACTTTGAAAACACGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTATGTTCAGTCATCCCTTCGTGGATc                                                                                          <  2:5902510/140‑1 (MQ=14)

                aTTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATc                                                                                          <  2:9795951/140‑1 (MQ=255)

                 ttATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCa                                                                                         >  1:7677740/1‑140 (MQ=255)

                    tttCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGGGGCGGCGTCAGTCCGGAACGAGTTGAAATCACTAACCTCGGTTAGGCCTGTGTCCATCTGTCGTGGGTAGGTTCTGTCATCCCGTCGTGGATCAttt                                                                                      >  2:1976744/3‑140 (MQ=14)

                    tatCGAATTTGATTACAATCGGTGTCGTCGGCACAGTTGGTGTGGCGGCCTCAGTCCTGAACAATTAGAAAACAAAAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTACGTGGATCAttt                                                                                      >  2:1675512/1‑140 (MQ=14)

                    tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCAttt                                                                                      >  2:651937/1‑140 (MQ=255)

                    tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCAttt                                                                                      >  1:2528890/1‑140 (MQ=255)

                    tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCAttt                                                                                      >  1:9154773/1‑140 (MQ=255)

                    tatCGAATGTGATTACAAGCGGGGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGGGTAGGCCTGTGTCCATAATACGTGGGTAGGGTCAGTCATCCCTTCGTGGATCAttt                                                                                      >  2:8085617/1‑140 (MQ=14)

                      tCGAATGTGATTCCAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCAGTTTg                                                                                    >  1:3244218/1‑140 (MQ=255)

                      tCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTg                                                                                    >  2:2510692/1‑140 (MQ=255)

                      tCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTg                                                                                    >  2:9208605/1‑140 (MQ=255)

                      tCGAATGTGAGTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTg                                                                                    >  2:4613181/1‑140 (MQ=255)

                         actgagATTACAATCGCTGGCCCCGGCACAGATGGTGGGGCGGCATCAGTGCGCAACAATTAGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGGGGGTATGGTCAGTCATCCCTTCGTGGATCAATTTGACt                                                                                 <  2:8669918/135‑1 (MQ=17)

                         aaTGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACt                                                                                 <  2:4809130/140‑1 (MQ=255)

                         aaTGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACt                                                                                 <  2:4932762/140‑1 (MQ=255)

                         aaTGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACt                                                                                 >  1:5189753/1‑140 (MQ=255)

                           tgtgATTCCAATCGGTGGCGGCGGCACAGTTGGTGGGGCGGCCTCAGTCCGGAACAATTGGAAACCACGAACCTGGCGTCGGCCTGTGTCCTTTTTAGGTGGGTAGGATCAGTCATCCCGTCGTGGATCAGTGTGCCTgc                                                                               >  2:7829241/1‑140 (MQ=14)

                           tgtgATTACAATCTGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAAAAAGAACCTCGCTTAGGCATGTGTCCAGATTACGTGGGTAGGAGCAGTCCTCCCTTCGTGGATCAGTTTGACTgc                                                                               >  2:7527710/1‑140 (MQ=17)

                           tgtgATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTgc                                                                               >  2:8115091/1‑140 (MQ=255)

                               aTTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTgccgcc                                                                           >  2:4478365/1‑140 (MQ=255)

                               aTTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTgccgcc                                                                           >  1:3827482/1‑140 (MQ=255)

                               aTTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTgccgcc                                                                           >  1:233093/1‑140 (MQ=255)

                               aTTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTgccgcc                                                                           >  1:8931555/1‑140 (MQ=255)

                                   cAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTgcg                                                                       <  2:3542847/140‑1 (MQ=255)

                                   cAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCAGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTgcg                                                                       <  1:9819922/140‑1 (MQ=255)

                                    aaTCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTgcgc                                                                      <  2:895796/140‑1 (MQ=255)

                                      tCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTa                                                                    <  1:2799949/140‑1 (MQ=255)

                                       cGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCAGTTTGACTGCCGCCTGCGCTag                                                                   >  1:8250336/1‑139 (MQ=255)

                                        ggTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTAtt                                                                  <  2:5261281/140‑1 (MQ=255)

                                         gTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTc                                                                 >  1:8703473/1‑140 (MQ=255)

                                         gTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTc                                                                 >  1:648432/1‑140 (MQ=255)

                                         gTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTc                                                                 >  2:291623/1‑140 (MQ=255)

                                         gTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTc                                                                 >  2:103196/1‑140 (MQ=255)

                                         gTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATGTGAAACCAAGAACCTCGCTTAGGCCGGTGTCCATATTACGTGGGTCGGGGCCGTCATCGCTTCGTGGATCTGTGTGTGTGGCGCCTgcgggttgg                                                                 >  2:8598122/1‑134 (MQ=14)

                                          tGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCGATTCt                                                                >  2:6861430/1‑140 (MQ=255)

                                          tGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCt                                                                >  1:1648771/1‑140 (MQ=255)

                                              ggcggcACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGttt                                                            >  2:1526344/1‑140 (MQ=255)

                                                  gcACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTg                                                        <  2:1150226/140‑1 (MQ=255)

                                                   cacaGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTgg                                                       <  1:2933892/140‑1 (MQ=255)

                                                          ggTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTg                                                >  1:7473604/1‑140 (MQ=255)

                                                          ggTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTg                                                >  1:7306827/1‑140 (MQ=255)

                                                            tgtgGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGc                                              >  1:4894204/1‑140 (MQ=255)

                                                            tgtgGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGc                                              >  1:4447630/1‑140 (MQ=255)

                                                            tgtgGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGCTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTGTTGGCGCGCTGGc                                              >  2:726942/1‑140 (MQ=255)

                                                             gtgGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCg                                             >  2:5525178/1‑140 (MQ=255)

                                                             gtgGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCg                                             >  2:6580108/1‑140 (MQ=255)

                                                             atgGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCg                                             >  1:9667934/2‑140 (MQ=255)

                                                                gcggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGc                                          >  2:4866806/1‑140 (MQ=255)

                                                                gcggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGGTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGc                                          >  2:6731194/1‑140 (MQ=255)

                                                                gcggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGc                                          <  1:3977639/140‑1 (MQ=255)

                                                                gcggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGc                                          >  2:5989234/1‑140 (MQ=255)

                                                                gcggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGc                                          >  2:8856455/1‑140 (MQ=255)

                                                                  ggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTGTTCTGTTTTTTGgcgcgctggcgcgctg                                        >  1:5990597/1‑140 (MQ=255)

                                                                  ggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCAGGCGTGcag                                        >  2:5365467/1‑138 (MQ=25)

                                                                  ggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTg                                        >  2:3707815/1‑140 (MQ=255)

                                                                   gcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATCTTCCGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTAGGCTGTGGTTTGGCGCGCTGGCGAGCTGa                                       >  2:9701433/1‑140 (MQ=25)

                                                                    ccTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGaa                                      >  1:3857789/1‑140 (MQ=255)

                                                                      tCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAAt                                    >  2:3247824/1‑140 (MQ=255)

                                                                      tCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAAt                                    >  1:5474742/1‑140 (MQ=255)

                                                                      tCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAAt                                    >  1:4118995/1‑140 (MQ=255)

                                                                        aGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCCGACCTTGGTGGATCATTTTGACTGCCTCATGAGCTATTCTGTATTTTGGCGCGCTGGCGAGCTGAAATCg                                  <  2:4063155/140‑1 (MQ=21)

                                                                        aGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCg                                  >  2:5625727/1‑140 (MQ=255)

                                                                        aGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCg                                  <  1:6111070/140‑1 (MQ=255)

                                                                            cGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGctct                              <  2:9492128/140‑1 (MQ=255)

                                                                              gAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCttt                            <  2:3148780/140‑1 (MQ=255)

                                                                              gAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCttt                            >  1:203700/1‑140 (MQ=255)

                                                                               aaCAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGTTTCAGTCATCCCTTCGTGGATCATTTTGACTGCAGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTa                           >  1:5921852/1‑140 (MQ=255)

                                                                               aaCAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGTATCAGTCATCCATTCGTGGATCAGTTTTACTGCCGCCTGAGCTATTCTGTTTTTTGTCGCGCTTGCGAGCTGAAATCGATATTTa                           >  2:4339352/1‑140 (MQ=25)

                                                                               aaCAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGTGCTGAAATCGCTCTTTa                           >  1:1896589/1‑140 (MQ=255)

                                                                                   aTTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAAcc                       >  2:2011375/1‑140 (MQ=255)

                                                                                    tttGAAAACAAGANGCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTCTTCTGTTTTTTGGCGCGCTNGCGAGCTGAAATCGCTCTTTAAAccc                      >  1:6253795/1‑140 (MQ=255)

                                                                                    tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCg                                  <  2:8788717/128‑1 (MQ=255)

                                                                                    tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCg                                  >  1:8788717/1‑128 (MQ=255)

                                                                                    tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAAccc                      >  2:419217/1‑140 (MQ=255)

                                                                                     ttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCg                     <  2:8241224/140‑1 (MQ=255)

                                                                                       gAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGAc                   <  1:8376579/140‑1 (MQ=255)

                                                                                           aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTcc               <  1:9575566/140‑1 (MQ=255)

                                                                                           aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTcc               <  1:3144875/140‑1 (MQ=255)

                                                                                                 cccTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAACCCCGACTTCCTGGGtc         <  1:5793630/139‑1 (MQ=255)

                                                                                                  ccTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGtct        <  1:3594350/140‑1 (MQ=255)

                                                                                                  ccTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGtct        <  1:9472737/140‑1 (MQ=255)

                                                                                                  ccTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTGCCTGGGtct        <  2:6928866/140‑1 (MQ=255)

                                                                                                  ccTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCAGTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCGCTTTAAACGCGACTTCCTGGGtct        >  2:1345249/1‑140 (MQ=39)

                                                                                                  ccTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGtct        <  1:7966488/140‑1 (MQ=255)

                                                                                                  ccTCGCTTAGGCCTGTGTCCATAGTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGtct        <  1:6610821/140‑1 (MQ=255)

                                                                                                  ccTCGCTGAGGCCTGTGTCCAGATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGtct        <  2:8434665/140‑1 (MQ=255)

                                                                                                     cGCTTAGGCCTGTGTCCATATTACGTGGGTAGGTTCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCgg     >  1:6976106/1‑140 (MQ=255)

                                                                                                      gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGt    >  2:6286233/1‑140 (MQ=255)

                                                                                                        ttAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCGGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGttt  <  1:1077366/140‑1 (MQ=255)

CGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAAGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTT  >  NZ_CP025268/2175330‑2175573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`