BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,278,552	T→C	I267V (ATC→GTC)	agaR ←	aga operon transcriptional regulator AgaR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,278,552	0	T	C	100.0%	1703.8 / NA	489	I267V (ATC→GTC)	agaR	aga operon transcriptional regulator AgaR
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (219/270); total (219/270)

Only 100 of 489 total aligned reads displayed.

AATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGATCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGAACTTACTGGAATCG  >  NZ_CP025268/3278417‑3278688

aaTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGa                                                                                                                                      >  1:6518168/1‑140 (MQ=255)

aaTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGa                                                                                                                                      >  2:5249675/1‑140 (MQ=255)

aaTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGa                                                                                                                                      >  2:6274195/1‑140 (MQ=255)

aaTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGAGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGa                                                                                                                                      >  2:8086322/1‑140 (MQ=255)

  tGTTAAAAAGAGGACATCCTCCTGCCGACTGTGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCCGAAt                                                                                                                                    >  2:7122945/1‑140 (MQ=255)

     tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCAc                                                                                                                                 >  2:171045/1‑140 (MQ=255)

      aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACt                                                                                                                                <  2:9535368/140‑1 (MQ=255)

       aaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACtt                                                                                                                               >  2:1950706/1‑140 (MQ=255)

            agGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                                                                                                                          >  1:9645931/1‑140 (MQ=255)

             ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAccc                                                                                                                         <  1:2153521/140‑1 (MQ=255)

              gACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcccc                                                                                                                        >  1:5451240/1‑140 (MQ=255)

                       ctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCg                                                                                                               >  1:2627369/1‑140 (MQ=255)

                         gCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAATCCCATTGATGGTGTTCACAATGCCGGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCTGCCTTTCGCa                                                                                                             <  1:2702891/140‑1 (MQ=255)

                          ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                                                                                                            <  1:6896098/140‑1 (MQ=255)

                          ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                                                                                                            <  2:4767455/140‑1 (MQ=255)

                           cGACTGGGAAACCCTCACCCGAGAAACAGAAGACACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGt                                                                                                           <  2:8198884/140‑1 (MQ=255)

                           cGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGt                                                                                                           <  2:3415452/140‑1 (MQ=255)

                             aCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcc                                                                                                         >  2:4377577/1‑140 (MQ=255)

                               tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCtt                                                                                                       >  2:6422202/1‑140 (MQ=255)

                               tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTGTCGCAGTCCtg                                                                                                       >  2:3191777/1‑139 (MQ=255)

                                    aaCCCTCACCCGAGAAGCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg                                                                                                  <  2:5371089/140‑1 (MQ=255)

                                    aaCCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg                                                                                                  >  1:886828/1‑140 (MQ=255)

                                    aaCCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg                                                                                                  <  1:8350195/140‑1 (MQ=255)

                                          cACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATcc                                                                                            <  2:1036823/140‑1 (MQ=255)

                                           aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCg                                                                                           >  2:2032552/1‑140 (MQ=255)

                                             ccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCa                                                                                         >  1:1169005/1‑140 (MQ=255)

                                                agaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGa                                                                                      <  1:5000709/140‑1 (MQ=255)

                                                agaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGa                                                                                      <  1:4086821/140‑1 (MQ=255)

                                                 gaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGaa                                                                                     <  2:5540726/140‑1 (MQ=255)

                                                 gaAACAGAAGAAACCCATTGATGGTGTTAACAATGCCCGCCGAACGCAGTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGCCTCACTTCAACCCCAGCCTTTCGCAGTCCTGCCAGGCTATCCGCAGGaa                                                                                     >  2:4212347/1‑140 (MQ=255)

                                                     cAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGcc                                                                                 <  2:8953092/140‑1 (MQ=255)

                                                     cAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGcc                                                                                 <  2:3613024/140‑1 (MQ=255)

                                                     cAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGcc                                                                                 <  2:7659860/140‑1 (MQ=255)

                                                     cAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGcc                                                                                 <  2:3693500/140‑1 (MQ=255)

                                                     cAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGcc                                                                                 >  1:2896440/1‑140 (MQ=255)

                                                       gaagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAGCAGCGGGCCTCCTTTCGCACTCCCCGACCAGAATCACTTCCTCCCGAGCCGTTCGCAGTCCTTCCAGGCTAGCCGCAGGAATGCCtt                                                                               >  1:8685009/1‑140 (MQ=255)

                                                          gacaCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGATGACCAGCGGGCATCCTTTCTCACTCCCCGCCCAGAATCACTTCAACCCCACCCTTGCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtcat                                                                            <  2:1236148/137‑1 (MQ=255)

                                                          gaaACCCATTGATGGTGTTCACAATGCCCGACGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTtcat                                                                            <  2:3776115/140‑1 (MQ=255)

                                                             aCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATcaa                                                                         <  1:4896100/140‑1 (MQ=255)

                                                                  ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGTAATGCCTTCATCAACAATg                                                                    >  1:3906379/1‑140 (MQ=255)

                                                                  ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATg                                                                    <  2:4321962/140‑1 (MQ=255)

                                                                    gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGAt                                                                  <  1:416503/140‑1 (MQ=255)

                                                                     aTGGTGTTCACAATGCCATCCGAACGCATTCGTGTATACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATAAAAGCAACCCCATCCGAAATCAGACCTTCCAGGATATCCGCAGTAATGCCATCATCAACAATGAta                                                                 >  2:5982708/1‑139 (MQ=255)

                                                                        gtgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATg                                                              <  1:9808602/140‑1 (MQ=255)

                                                                         tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGt                                                             >  1:1113420/1‑140 (MQ=255)

                                                                         tgtTCACAATGCCCGCCGAACGCATTAGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGt                                                             >  2:5797910/1‑140 (MQ=255)

                                                                           ttCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCg                                                           >  2:6991871/1‑140 (MQ=255)

                                                                            tCACAATGCCCTCCGAACGCATTCGTGTTGTCCAGCGGGCATCCTTTCTCACTCCCCGACCAGACTCACTTCAACCCCAGCCTTTCGCAGTCCTTCAAGGCTATCCGCAGGACTGCCTTCATCAACAATGATCATGTCGa                                                          <  2:3881114/140‑1 (MQ=255)

                                                                            tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGa                                                          <  1:7019569/140‑1 (MQ=255)

                                                                            tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGa                                                          <  1:1950706/140‑1 (MQ=255)

                                                                             cactATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGAt                                                         <  1:9284520/140‑1 (MQ=255)

                                                                             cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGAt                                                         <  1:7637013/140‑1 (MQ=255)

                                                                             cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGAt                                                         <  2:5076486/140‑1 (MQ=255)

                                                                             cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGAt                                                         >  2:5736223/1‑140 (MQ=255)

                                                                                 aTGCCCGCCGAACGCATTCGTGTTGACCAGC‑GGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGtt                                                    <  2:263798/140‑1 (MQ=255)

                                                                                  tGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGtt                                                    <  2:7395044/140‑1 (MQ=255)

                                                                                  ggCCCGCCGAACGCATTCGTCTTGACCAGCGGGCCACCTTTCTCACTCCCCGACCAGAATAACTTCAACCACAGCCTTTCGCAGTCCTTCCAGGCTAACCGCAGGAATGCCTTCATCACCAATGATCATGTCGATACgat                                                    <  2:3233270/139‑3 (MQ=255)

                                                                                   gCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTg                                                   >  2:2984268/1‑140 (MQ=255)

                                                                                   gCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTg                                                   >  1:5813321/1‑140 (MQ=255)

                                                                                   gCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTg                                                   >  2:8662019/1‑140 (MQ=255)

                                                                                     ccgccgAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGCCCAGAATCACTTCAACCCCAGCCTGGCGCAGTCCTTCCAGGCTCTCCGCAGGAAGGCCTTCATCAACAATGAACCTGTCGATACGTTGAg                                                 >  2:2382705/1‑140 (MQ=255)

                                                                                     ccgccgAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGACTGCCTTCATCAACAATGATCATGTCGATACGTTGAg                                                 >  1:8566730/1‑140 (MQ=255)

                                                                                     ccgccgAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATcaaca                                                                       >  2:7887073/1‑118 (MQ=255)

                                                                                     ccgccgAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATcaaca                                                                       <  1:7887073/118‑1 (MQ=255)

                                                                                     ccgccgAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAg                                                 >  1:2334976/1‑140 (MQ=255)

                                                                                     ccgccgAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAg                                                 >  2:2452761/1‑140 (MQ=255)

                                                                                     ccgccgAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAg                                                 >  1:3629014/1‑140 (MQ=255)

                                                                                       gccgAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTa                                               >  1:9699725/1‑140 (MQ=255)

                                                                                           aaCGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCaa                                           <  1:4708973/140‑1 (MQ=255)

                                                                                           aaCGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCaa                                           <  1:7817700/140‑1 (MQ=255)

                                                                                                aTTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATc                                      <  1:4430648/140‑1 (MQ=255)

                                                                                                    gtgtTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCTCAGTCCTTCCAGGCAATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTAt                                  <  2:8844305/140‑1 (MQ=255)

                                                                                                    gtgtTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTAt                                  <  1:3375229/140‑1 (MQ=255)

                                                                                                     tgtTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACTATGATCATGTCGATACGTTGAGTATCAATGATCTTATg                                 <  2:7963850/140‑1 (MQ=255)

                                                                                                      gtTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGt                                <  1:1519444/140‑1 (MQ=255)

                                                                                                      gtTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGt                                <  1:538114/140‑1 (MQ=255)

                                                                                                       ttGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCTCTTCAACCCCAGCCTTTCGCAGTCCTTCCAGTCTATCCGCAGGAATGCCTTAATCAACAATGATCATTTCGATACGTTGAGTATAAATGATCTTATGTa                               <  2:289576/140‑1 (MQ=255)

                                                                                                       ttGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCATTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTa                               <  1:752743/140‑1 (MQ=255)

                                                                                                         gACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTaaa                             >  1:7245642/1‑140 (MQ=255)

                                                                                                             aGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTgg                         <  2:9145493/140‑1 (MQ=255)

                                                                                                               cGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATTCGTTGAGTATCAATGATCTTATGTAAACTGGaa                       >  2:6161258/1‑140 (MQ=255)

                                                                                                               cGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGaa                       <  2:968033/140‑1 (MQ=255)

                                                                                                               cGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGaa                       >  2:6618970/1‑140 (MQ=255)

                                                                                                               cGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGaa                       >  1:3237004/1‑140 (MQ=255)

                                                                                                               cGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGaa                       >  1:9414131/1‑140 (MQ=255)

                                                                                                               cGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGaa                       <  1:6064601/140‑1 (MQ=255)

                                                                                                                  gCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTCTCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGa                    <  2:9393516/140‑1 (MQ=255)

                                                                                                                       cTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGaa               <  2:8312026/140‑1 (MQ=255)

                                                                                                                              aCTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCACGAATGCATTCATCAACTATGATCATGTCGATACGTTGAGTATAAAGGATCTTATGTAAACTGGAACGATTGAACTTACTg        <  2:1456491/140‑1 (MQ=255)

                                                                                                                                tCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCCGGCTATCCGCAGGAATGCCTTCATCAACACTGATCATGTCGATACGTTGAGTATCAAGGATCTTATGTAAACTGGACCGATTGTACTTACTGGa      >  2:9073850/1‑140 (MQ=255)

                                                                                                                                tCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGAACTTACTGGa      >  1:7406814/1‑140 (MQ=255)

                                                                                                                                tCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGAACTTACTGGa      >  1:810875/1‑140 (MQ=255)

                                                                                                                                tCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGAACTTACTGGa      >  1:9040193/1‑140 (MQ=255)

                                                                                                                                 ccccGACGAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGAACTTACTGGaa     <  2:681611/140‑1 (MQ=255)

                                                                                                                                 ccccGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATNTAAACTGGAACGATTGAACTTACTGGaa     >  1:6275230/1‑140 (MQ=255)

                                                                                                                                 ccccGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGAACTTACTGGaa     >  2:7800076/1‑140 (MQ=255)

                                                                                                                                 ccccGACCAGAATCACTACAACCCCAGCCTTTCGCAGTCCTTCAAGGCTATCCGAAGTAATGCCTTCATCAACAATGATCATGTCGATACTTTGATTATCAATTATCTTATGTAAACTTTAACGATTTAAATTAATGGaa     >  2:2728602/1‑140 (MQ=255)

                                                                                                                                  cccGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCCATGATCTTATGTAAACTGGAACGATTGTACTTACTGGact    >  1:8510184/1‑138 (MQ=255)

                                                                                                                                    cGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGAACTTACTGGAATCg  <  2:8438835/140‑1 (MQ=255)

                                                                                                                                    cGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGAACTTACTGGAATCg  <  1:5136055/140‑1 (MQ=255)

AATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGATCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGGAATGCCTTCATCAACAATGATCATGTCGATACGTTGAGTATCAATGATCTTATGTAAACTGGAACGATTGAACTTACTGGAATCG  >  NZ_CP025268/3278417‑3278688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`