BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	4,270,732	T→C	68 (TAA→TAG)	CXP41_RS22090 ←	protein YjbS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	4,270,732	0	T	C	99.2%	423.8 / NA	123	68 (TAA→TAG)	CXP41_RS22090	protein YjbS
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (63/59); minor base A (1/0); total (64/59)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 131 total aligned reads displayed.

GTAAGTTTAACCTTATATTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAATTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACTGTGTTTCTATGTATAAAAAGAAATCTTTGGCATAAGAGATA  >  NZ_CP025268/4270596‑4270861

gtAAGTTTAACCTTATATTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGttaactaa                                                                                                                                <  1:6007227/140‑1 (MQ=255)

gtAAGTTTAACCTTATATTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGttaactaa                                                                                                                                <  1:6009861/140‑1 (MQ=255)

         aCCTTATATTGATTACCAATNTCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTNTCTTACCNCTGATTTTGTTAACTAAATCAATaaa                                                                                                                       >  1:6241898/1‑140 (MQ=255)

         aCCTTATATTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATaaa                                                                                                                       >  1:1392958/1‑140 (MQ=255)

         aCCTTATATTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATaaa                                                                                                                       >  1:7010488/1‑140 (MQ=255)

         aCCTTATATTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATaaa                                                                                                                       >  1:7010587/1‑140 (MQ=255)

         aCCTTATATTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATaaa                                                                                                                       >  1:2393584/1‑140 (MQ=255)

                atTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGa                                                                                                                <  2:7647031/140‑1 (MQ=255)

                atTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGa                                                                                                                <  2:7646170/140‑1 (MQ=255)

                    aTTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGaaaaa                                                                                                            >  2:4450080/1‑140 (MQ=255)

                    aTTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGaaaaa                                                                                                            >  2:1121273/1‑140 (MQ=255)

                    aTTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGaaaaa                                                                                                            >  1:9871621/1‑140 (MQ=255)

                    aTTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGaaaaa                                                                                                            >  1:1361150/1‑140 (MQ=255)

                    aTTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGaaaaa                                                                                                            >  1:5817409/1‑140 (MQ=255)

                      tACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTg                                                                                                                 >  2:6371222/1‑133 (MQ=255)

                      tACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACt                                                                                                          >  2:5238669/1‑140 (MQ=255)

                           atatCAAATAAAAAGTTCCTGTACTGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACt                                                                                                     <  2:7509057/140‑1 (MQ=255)

                            tatCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACt                                                                                                     >  1:1311443/1‑139 (MQ=255)

                             atCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTg                                                                                                   >  1:9334498/1‑140 (MQ=255)

                                  aTAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATa                                                                                              <  2:7631615/140‑1 (MQ=255)

                                  aTAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATa                                                                                              <  2:7010587/140‑1 (MQ=255)

                                  aTAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATa                                                                                              >  2:2946090/1‑140 (MQ=255)

                                  aTAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATa                                                                                              >  1:7631615/1‑140 (MQ=255)

                                   tAAAAATGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGCAAAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATa                                                                                              <  2:8395156/140‑1 (MQ=255)

                                     aaaaGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGaa                                                                                           <  2:1392958/140‑1 (MQ=255)

                                        aGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGttaactaa                                                                                                                                >  2:9775943/1‑100 (MQ=255)

                                        aGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGttaactaa                                                                                                                                <  1:9775943/100‑1 (MQ=255)

                                          gTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACATCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGa                                                                                      <  2:9740425/140‑1 (MQ=255)

                                          gTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGa                                                                                      <  2:2393584/140‑1 (MQ=255)

                                           tCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGAt                                                                                     <  2:1361150/140‑1 (MQ=255)

                                           tCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGAt                                                                                     <  2:6404185/140‑1 (MQ=255)

                                            ccTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGttaactaa                                                                                                                                >  2:714605/1‑96 (MQ=255)

                                            ccTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATa                                                                                              >  2:7644324/1‑130 (MQ=255)

                                            ccTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATa                                                                                              <  1:7644751/130‑1 (MQ=255)

                                            ccTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATa                                                                                    >  1:8316328/1‑140 (MQ=255)

                                            ccTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATa                                                                                    >  2:3759273/1‑140 (MQ=255)

                                                     agaATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTtctc                                                                           >  1:9716957/1‑140 (MQ=255)

                                                       aataatCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAAt                                                                                                                              <  1:304428/87‑1 (MQ=255)

                                                       aataatCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAAt                                                                                                                              >  2:304428/1‑87 (MQ=255)

                                                       aataatCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAGAACTTTACTTGCAATAGAACTTGATa                                                                                    >  2:9538158/1‑129 (MQ=255)

                                                       aataatCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAGAACTTTACTTGCAATAGAACTTGATa                                                                                    <  1:9538158/129‑1 (MQ=255)

                                                       aataatCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACt                                                                                                     >  1:3045415/1‑112 (MQ=255)

                                                       aataatCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATAct                                                                                  >  2:2413875/1‑131 (MQ=255)

                                                       aataatCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCa                                                                         >  1:8498410/1‑140 (MQ=255)

                                                          aatCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGt                                                                      >  1:5464627/1‑140 (MQ=255)

                                                          aatCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGt                                                                      >  2:1557120/1‑140 (MQ=255)

                                                            tCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCaa                                                                                                <  1:2334371/112‑1 (MQ=255)

                                                            tCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGa                                                                                      <  1:7326167/122‑1 (MQ=255)

                                                                 tttAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTaaaaa                                                               >  1:5490885/1‑140 (MQ=255)

                                                                 tttAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTaaaaa                                                               >  2:1750748/1‑140 (MQ=255)

                                                                 tttAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTaaaaa                                                               >  1:5490926/1‑140 (MQ=255)

                                                                 tttAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTaaaaa                                                               >  2:742630/1‑140 (MQ=255)

                                                                 tttAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTaaaaa                                                               >  1:3657327/1‑140 (MQ=255)

                                                                      cctcctCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTg                                                                                                                 <  1:5533050/85‑1 (MQ=255)

                                                                      cctcctCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTg                                                                                                                 >  2:5533050/1‑85 (MQ=255)

                                                                         cctcGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTg                                                       <  1:1750748/140‑1 (MQ=255)

                                                                         cctcGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTg                                                       <  2:5464627/140‑1 (MQ=255)

                                                                         cctcGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTg                                                       <  2:3657327/140‑1 (MQ=255)

                                                                          ctcGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGc                                                      >  1:8040312/1‑140 (MQ=255)

                                                                          ctcGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGc                                                      >  1:6431894/1‑140 (MQ=255)

                                                                          ctcGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGc                                                      >  2:5251477/1‑140 (MQ=255)

                                                                          ctcGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGc                                                      >  1:2453371/1‑140 (MQ=255)

                                                                           tcGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCa                                                     <  1:2886410/140‑1 (MQ=255)

                                                                               cAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGt                                                                      <  1:4037881/119‑1 (MQ=255)

                                                                                 aaaCAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAAttttt                                               <  2:2453371/140‑1 (MQ=255)

                                                                                 aaaCAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAAttttt                                               <  2:209673/140‑1 (MQ=255)

                                                                                 aaaCAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAAttttt                                               <  1:1557120/140‑1 (MQ=255)

                                                                                 aaaCAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAAttttt                                               <  2:4841261/140‑1 (MQ=255)

                                                                                   aCAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             <  1:9188275/140‑1 (MQ=255)

                                                                                   aCAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             <  2:9717304/140‑1 (MQ=255)

                                                                                   aCAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             <  1:3759273/140‑1 (MQ=255)

                                                                                   aCAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             <  1:1121273/140‑1 (MQ=255)

                                                                                     aGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACt                                           <  2:5490885/140‑1 (MQ=255)

                                                                                     aGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACt                                           <  2:9334498/140‑1 (MQ=255)

                                                                                      gCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACtg                                          <  2:8040312/140‑1 (MQ=255)

                                                                                      gCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACtg                                          <  2:6431894/140‑1 (MQ=255)

                                                                                           gCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACTGTGttt                                     <  1:2710996/140‑1 (MQ=255)

                                                                                            cGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             >  2:8345659/1‑131 (MQ=255)

                                                                                              tGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             >  2:1727073/1‑129 (MQ=255)

                                                                                              tGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             <  1:1727073/129‑1 (MQ=255)

                                                                                               gC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             <  2:5503169/128‑1 (MQ=255)

                                                                                               gC‑AAATATACATAAAGTCTTTCTTACACCTGATGGTGTTAACTAAATCAATAAATGCGTGAAATACTTTACTTGCAATAGACCTTGATACGTCTTCTCCAGGTGTAAAACTAGGTTTGCAATTTTTAACGGGGTTTCTag                                 >  2:283925/1‑139 (MQ=255)

                                                                                                       taCATAAAGTCTTTCTTACCCCTGATTTTGttaactaa                                                                                                                                >  2:8970692/1‑38 (MQ=255)

                                                                                                       taCATAAAGTCTTTCTTACCCCTGATTTTGttaactaa                                                                                                                                <  1:8970692/38‑1 (MQ=255)

                                                                                                          aTAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACt                                                                                                     <  1:6179100/62‑1 (MQ=255)

                                                                                                          aTAAAGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACt                                                                                                     >  2:6179100/1‑62 (MQ=255)

                                                                                                            aaaGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACtgtg                                        <  1:6184103/121‑1 (MQ=255)

                                                                                                              aGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             <  2:4753254/114‑1 (MQ=255)

                                                                                                              aGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTaa                                             >  1:4753254/1‑114 (MQ=255)

                                                                                                              aGTCTTTCTTACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACTGTGTTTCTATGTATAAAAAGAAAt                   >  2:1428039/1‑140 (MQ=255)

                                                                                                                    tcttACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATa                                                                                              <  2:3927250/59‑1 (MQ=255)

                                                                                                                    tcttACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATa                                                                                              >  1:3927250/1‑59 (MQ=255)

                                                                                                                    tcttACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGa                                                                                      <  2:732320/67‑1 (MQ=255)

                                                                                                                    tcttACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGa                                                                                      >  1:732320/1‑67 (MQ=255)

                                                                                                                    tcttACCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACTGTGTTTCTATGTATAAAAAGAAATCTTTgg             >  1:5154695/1‑140 (MQ=255)

                                                                                                                        aCCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACt                                                                                                     <  2:8393235/48‑1 (MQ=255)

                                                                                                                        aCCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACt                                                                                                     >  1:8393235/1‑48 (MQ=255)

                                                                                                                        aCCCCTGATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACTGTGTTTCTATGTATAAAAAGAAATCTTTGGCATa         >  1:2140586/1‑140 (MQ=255)

                                                                                                                              gATTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGAt                                                                                     <  1:4860535/58‑1 (MQ=255)

                                                                                                                               aTTTTGTTAACTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACTGTGTTTCTATGTATAAAAAGAAATCTTTGGCATAAGAGata  >  1:5163151/1‑140 (MQ=255)

GTAAGTTTAACCTTATATTGATTACCAATATCAAATAAAAAGGTCCTGTAATGAGAATAATCACCTTTAACCTCCTCGGCAAAACAGCAAAGCGTGC‑AAATATACATAAAGTCTTTCTTACCCCTGATTTTGTTAATTAAATCAATAAATGCGTGAAAAACTTTACTTGCAATAGAACTTGATACTTCTTCTCCAGGTCTAAAAAATCTTTTGCAATTTTTAACTGTGTTTCTATGTATAAAAAGAAATCTTTGGCATAAGAGATA  >  NZ_CP025268/4270596‑4270861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`