| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 4,501,415 | A→G | *410* (TAA→TAG) | CXP41_RS23285 → | IS3‑like element IS2 family transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,501,415 | 0 | A | G | 99.6% | 2472.8 / NA | 756 | *410* (TAA→TAG) | CXP41_RS23285 | IS3‑like element IS2 family transposase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (276/477); minor base T (1/2); total (277/479) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 756 total aligned reads displayed.
TGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAAGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGT > NZ_CP025268/4501289‑4501551 | tGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAcc < 2:3178903/140‑1 (MQ=11)tGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAcc > 1:7008218/1‑140 (MQ=11)tGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAcc < 2:5804914/140‑1 (MQ=11)tGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAcc < 2:6296826/140‑1 (MQ=11) cAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCtt < 2:4570723/140‑1 (MQ=17) agGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTtgtg < 1:6527604/140‑1 (MQ=21) agGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTtgtg < 1:213219/140‑1 (MQ=21) gCGTTCGCGCATTATCACGAATGGCATCCGCATCGTGCGCGGGGTTATCGCTCGCCACGTGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCACATCCACCTTGTGCt < 2:4072419/140‑1 (MQ=11) gCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCt < 2:1046355/140‑1 (MQ=37) ttCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGTGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATTGGTTAAGTTATAACAGATTTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGat < 2:9287540/140‑1 (MQ=14) ttCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGat > 1:2841922/1‑140 (MQ=255) ttCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGat > 2:7542990/1‑140 (MQ=255) ttCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGat < 1:3534612/140‑1 (MQ=255) ttCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGat > 1:4178001/1‑140 (MQ=255) ttCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGat > 2:2055889/1‑140 (MQ=255) ttCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGat > 2:83631/1‑140 (MQ=255) tCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGata < 1:9646778/140‑1 (MQ=255) gCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGaa < 2:5907783/140‑1 (MQ=255) gCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGaa < 1:3916136/140‑1 (MQ=255) atatCGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACgg < 2:911901/140‑1 (MQ=255) ataACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATTTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACgg < 2:5540426/140‑1 (MQ=255) ataACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATTAATACgg < 2:3494254/140‑1 (MQ=255) ataACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACgg < 2:7006305/140‑1 (MQ=255) ataACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACgg < 1:8892465/140‑1 (MQ=255) ataACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACgg < 1:2276466/140‑1 (MQ=255) ataACGAATGGCAGCCGCATAGTGCGCTGGGTTATCGCTCGCAACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAAGATAGGGGCAAATCCACCTTGTGCTGATATGAATACgg < 2:4322990/140‑1 (MQ=255) aaCGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGat < 1:250298/140‑1 (MQ=255) aTGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATAtttt > 2:2262920/1‑140 (MQ=255) ggCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTtat > 1:9339853/1‑140 (MQ=255) ggCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTtat > 2:5090463/1‑140 (MQ=255) gCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTtata < 1:3243073/140‑1 (MQ=255) aTCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACa < 1:6746651/140‑1 (MQ=255) aTCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACa < 1:7164702/140‑1 (MQ=255) aTCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACa < 1:5452204/140‑1 (MQ=255) aTCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACa < 2:8253889/140‑1 (MQ=255) cGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGaa < 1:4389239/140‑1 (MQ=255) tGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCCGCGGGCTTGTAATGGGTTAAGTGAGAACAGAGGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACtttt < 2:2864721/140‑1 (MQ=255) tGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACtttt < 2:8750766/140‑1 (MQ=255) cgcTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCa < 1:8682874/140‑1 (MQ=255) ggTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACa > 2:3288718/1‑140 (MQ=255) tATCGCTCGCCACGGGAATATCTGCGGCAGCGGGTTTTTAAGGGGTTAAGTGATAACAGATGTCTGGAAATATAGGTGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCTGTACAAGc < 2:394914/140‑1 (MQ=21) tATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGc < 2:9626736/140‑1 (MQ=255) tATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGc > 1:8524107/1‑140 (MQ=255) tcgctcgcCTCGGTAATATCTGCGGCAGCGGGCTTGTATTGTGTTATGTGATAACAGTTGTCTGGAAATATAGGGGAAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATAATTTTCATTACAAGCGa < 2:1508777/140‑1 (MQ=21) tcgctcgcCACGGTAATATCTGCGGCAGCGGGCTTGTATTGGGTTATGTGATAACAGATGTCTGGAAATATCGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGa < 1:1742794/140‑1 (MQ=25) tcgctcgcCACGGTAATATCTGCGGCAGCGGGCTTGTAATGGTTTAAGTTATAACATATGTCTGCAAATATAGGGGCAAATCCACCTTGTGCTGATATTAATACGGATATTTTATACAGAATAATTTTCAGTACAAGCGa < 1:1312862/140‑1 (MQ=21) tcgctcgcCACGGGAATATCTGCGGCTGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGGGCTGATATGAATACGGATATTTTATACAGAATACTTGTCAGTACAAGCGa < 2:9354396/140‑1 (MQ=255) cgctcgcCACGGGAATATCTGCGGCAGCGGTCTTGTATTGGGTTAAGTGAAAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGTATATTTTATACAGAATACTTTTCAGTACAAGCGAc < 1:3028524/140‑1 (MQ=25) cgcCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTa > 2:686060/1‑140 (MQ=255) gcCACGGCAAAATCTGCGGCAGCCGGCATGTAATGGGATCACTTATAACAGATGTCAGCAAATATAGGCGAAAAACCACCTTGTGCTGATATGAATCCGCAAAATTTAAACATAATACTTTACAGTACAAGCGACTGCAt < 2:1090281/140‑1 (MQ=255) ccACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGc > 1:8161804/1‑131 (MQ=255) cACGGGAATATCTGCGGCTGCGGGCTTGTAATGGTTTAAGTGATAACATATGTCTGGAAATATCGGGGAAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCTGTACAAGCGACTGTATTa < 1:4918453/140‑1 (MQ=255) cACGGGAATATATGCGGCAGCGGGCTTTTAATGGGTTAAGTGATAACATATGTCTGGAAATATTGGGGCAAATCCACCTTGTTCTGATATGAATACGGATATTTTATACATAATACTTTTCAGTAAAAGCGACTGTATTa < 1:953316/140‑1 (MQ=25) gggAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAg < 1:4599787/140‑1 (MQ=255) gggAATAACTGCGGCAGCGGGCTTGTAATGGGTTAATTGATAACAGATGTATGTAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGTTATTTTATACAGAATACTTTTCATTACAAGCGACTGTATTACAg < 1:8996467/140‑1 (MQ=25) gtaaTATCTGCGGCAGCGGGCTTTTAATGGGTTAAGTTATAACAGATGTCTGTAAATATAGGGGCAAATCCACCTTGTGATTATATGAATACGGATTTTTTATACATAATACTTTTCATTACAAGCGACTGTATTACAGt < 2:469329/138‑1 (MQ=21) ggAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGt < 1:2682777/140‑1 (MQ=255) atatCGGCGGCAGCGGGCTTGTAATGGGTAACGTGATAACTGTTGACTGGAACTATAGGGGCAAATCCACCTGGTGCGGATATGAATACGGATATTTTATACAGAATACTTTTCTGTACACGCGACTGTATTACAGTCTg < 1:4783040/140‑1 (MQ=25) tagcTGCGGCCCCGGGCTTGTAATGGGTTAAGTTATAACAGATGTCTGTAAATATAGGGCCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGc < 2:6516900/137‑1 (MQ=37) atCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGcc > 1:9726665/1‑140 (MQ=255) gctgCAGCGGGCTTGTAATGGGTAAAGTGAAAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCTGTACAAGCGACTGTATTACAGTCTGCCatat < 2:8037245/137‑1 (MQ=37) gCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGACATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACATAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCatat < 2:2766416/140‑1 (MQ=255) ggCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCatatat > 1:1018145/1‑140 (MQ=255) gctgCGGGCCTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCCCCTTGTGCTGTTTTGAATACGGATATTTTATCCTGAATACTTTTCAGTACACGCGACTGTATTACAGTCTGCCTTATATg < 2:6662850/137‑1 (MQ=25) aGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAAGATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGAt < 2:7795498/140‑1 (MQ=255) gCGGGCTTGTAATGGGTTATGTGATAACAGATGTCTGTAAATATTGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACTTATTACTTTTCAGTACAAGCGACTGTATTTCAGTCTGCGATATATGAtt > 2:1899333/1‑140 (MQ=37) cGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACgg < 1:6002851/78‑1 (MQ=255) ggCTTGTAATGGGTTAAGTGATAAATGATGACTGGAAATATCGGGTCAAATACACCTTTTTCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTAcc < 2:7713648/140‑1 (MQ=38) aTGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAATCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCa > 2:7411872/1‑140 (MQ=255) ggTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGga > 1:5797274/1‑140 (MQ=255) ggTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGga > 1:8059254/1‑140 (MQ=255) aGTGATAACTGATGACTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATAAGATTACCTGTGATCAGTAAGAAt > 2:493794/1‑140 (MQ=255) aGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATAc > 2:8553238/1‑58 (MQ=255) aGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTa < 1:5072875/102‑1 (MQ=255) aGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTg > 1:3735398/1‑109 (MQ=255) aGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAAt > 2:1304633/1‑140 (MQ=255) aGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAAt > 2:4166194/1‑140 (MQ=255) tAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTg > 2:1759911/1‑140 (MQ=255) tAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTg > 2:6093276/1‑140 (MQ=255) tAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTg > 1:7437083/1‑140 (MQ=255) tAACAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGAAATGAATAAGTAAATAAAAAACATAAAAATTTTATGTACAATCGTCTGTATTAAAGTCTTCAATAAAAGATTACCTGATATCTGAAAGAAAAATTg > 2:3033492/1‑140 (MQ=255) aaCAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTgg > 1:7299596/1‑140 (MQ=255) aaCAGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTgg > 1:5543162/1‑140 (MQ=255) ataTGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTTATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTg < 1:9121555/138‑1 (MQ=255) aGATGTCTTTAAATATTGGGGAAAATCCACTTTGTGCTTATTTGAATACGTATTTTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTg < 1:3376074/140‑1 (MQ=255) aGATGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTg < 1:1944582/140‑1 (MQ=255) aTGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATAtt > 1:1101085/1‑54 (MQ=255) aTGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTa < 2:37712/91‑1 (MQ=255) aTGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAg > 1:5940247/1‑140 (MQ=255) aTGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAg > 1:1578850/1‑140 (MQ=255) tGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGt > 2:9026523/1‑94 (MQ=255) tGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAgg > 1:5231120/1‑140 (MQ=255) tGTCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAgg > 2:2456993/1‑140 (MQ=255) tCTGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGtt > 2:7242277/1‑140 (MQ=255) tCTGGAAATATAGGGGCAAANCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGANTACCTGTNATCAGGAAGAATAAGTGGCTGAGGtt > 1:6248645/1‑140 (MQ=255) tGGAAATATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCtgtg > 2:5442439/1‑112 (MQ=255) ggAAATATCGGGGCAAAGCCACCTTGTGCTGATATGAATACGGATATTTTATCCAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCa < 2:2592/140‑1 (MQ=255) aaaTATTGGGGCAAAACCACCTTGTGCTGATATGAATACGGATATTTTATACATATTAATTTTCTGTACACGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCaaa < 1:8342585/140‑1 (MQ=255) aaaTATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCaaa < 1:7801694/140‑1 (MQ=255) aaaTATAGGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCaaa < 1:6917437/140‑1 (MQ=255) | TGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAAGGGCAAATCCACCTTGTGCTGATATGAATACGGATATTTTATACAGAATACTTTTCAGTACAAGCGACTGTATTACAGTCTGCCATATATGATTACCTGTGATCAGGAAGAATAAGTGGCTGAGGTTTCAAACTGT > NZ_CP025268/4501289‑4501551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |