| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,352,362 | Δ1 bp | coding (1349/2337 nt) | arcB ← | aerobic respiration two‑component sensor histidine kinase ArcB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,352,359 | 0 | A | . | 98.8% | 2762.4 / 22.4 | 591 | coding (1352/2337 nt) | arcB | aerobic respiration two‑component sensor histidine kinase ArcB |
| Reads supporting (aligned to +/- strand): ref base A (2/5); new base . (276/305); total (281/310) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 613 total aligned reads displayed.
GAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGTTACTGATGAGG > NZ_CP025268/3352221‑3352496 | gAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaa > 2:7467844/1‑140 (MQ=255)gAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaa > 1:6970709/1‑140 (MQ=255) aaCCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaaa > 2:5982518/1‑140 (MQ=255) tGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTAt > 1:5634374/1‑140 (MQ=255) tGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTAt < 2:7767425/140‑1 (MQ=255) tGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTAt < 2:4380997/140‑1 (MQ=255) tGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTAt < 1:6669845/140‑1 (MQ=255) tGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTAt > 1:1493957/1‑140 (MQ=255) tGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTAt > 2:1418026/1‑140 (MQ=255) tgtgCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCACTACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGc < 2:6361138/140‑1 (MQ=255) tGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGc < 1:2502450/140‑1 (MQ=255) gTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCt < 2:11438758/140‑1 (MQ=255) gTTCGCTGGTAACCGTAATATCGCCGCCCATAGTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑ACATGTTATCCAGCt > 1:9471086/1‑140 (MQ=255) ttCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTc > 2:8941717/1‑140 (MQ=255) ttCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTc > 1:6264219/1‑140 (MQ=255) tGGTAACCGTAATATCGCCGCCCCTATTTTTCGACAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCt > 2:1516865/1‑140 (MQ=255) ggTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTg < 2:5161062/140‑1 (MQ=255) aCCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGa > 2:1089581/1‑140 (MQ=255) aCCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGa < 1:8460900/140‑1 (MQ=255) aCCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGa > 2:206281/1‑140 (MQ=255) aCCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGa < 1:1015497/140‑1 (MQ=255) aCCGGAAGATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGa > 2:5339364/1‑140 (MQ=255) tAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGc < 1:10778787/140‑1 (MQ=255) gaaTATCGCCGCCCATAATTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGc < 2:7092489/139‑1 (MQ=255) cgccgcCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATAc < 2:1778134/140‑1 (MQ=255) cgccgcCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATAc < 2:9168708/140‑1 (MQ=255) ccgccCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa > 1:10702856/1‑140 (MQ=255) ccgccCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa < 2:5081204/140‑1 (MQ=255) gccCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCaga < 1:10427590/140‑1 (MQ=255) cccATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag < 1:2332182/140‑1 (MQ=255) cccATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag < 1:4523312/140‑1 (MQ=255) ttttCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCa < 1:508559/140‑1 (MQ=255) cGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTc > 1:8160590/1‑140 (MQ=255) cGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTc > 1:7696187/1‑140 (MQ=255) gCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AATTTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCa < 1:10623559/140‑1 (MQ=255) gCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCa < 2:858500/140‑1 (MQ=255) gCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCa < 1:4159165/140‑1 (MQ=255) gCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCa < 1:434609/140‑1 (MQ=255) cAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCaaa < 1:9819145/140‑1 (MQ=255) cAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGACTTGTCTGTCTTTCACCTGGTTATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATTCCAGAGTCTTCCACTTCaaa < 1:10918579/140‑1 (MQ=255) gacgacGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAAt > 1:9352819/1‑140 (MQ=255) acgacgAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATg > 2:5537254/1‑140 (MQ=255) cgacgaGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgc < 1:5434003/140‑1 (MQ=255) cgaGAAACGGCCAGACCAATTCCGGTTCAGGTGGCAGGTTTAACGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCATGCGTATTGCCTTTACCAGAGTCTTCCACTTCAAAATgcagc < 2:2175462/140‑1 (MQ=255) gagaAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATgcagca > 1:10054483/1‑140 (MQ=255) cgaAACGGCCAGACCACTACCGGTGCCGGTGGCAGGTTTACCGCCATGCCTGTCTTTCACCTGGTACTCCATGGCG‑AAATGTTAGCCAGCTCAGCCTGCGGAACGCCGATCCCAGAGTCCTCCACTTCCCAATGCAGCat < 2:5833734/139‑1 (MQ=255) gaAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCata < 1:3604951/140‑1 (MQ=255) aaCGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATc < 1:5969551/140‑1 (MQ=255) cGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGc < 1:1121331/140‑1 (MQ=255) cGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGc > 1:1797642/1‑140 (MQ=255) gCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCt < 1:8528779/140‑1 (MQ=255) ccAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCtt > 2:10127825/1‑140 (MQ=255) aGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGC‑TAAATTTTATCAAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCTCCTTCa > 2:6849251/1‑140 (MQ=255) aTACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTAt < 1:3694069/69‑1 (MQ=255) aTACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGACTGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCAGCGGAg > 1:7480556/1‑140 (MQ=255) aCCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCCTCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcg < 2:7050820/140‑1 (MQ=255) aCCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcg < 2:5638054/140‑1 (MQ=255) ccggtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgc < 1:8333289/140‑1 (MQ=255) ggtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGCAgcgcac < 1:9167726/140‑1 (MQ=255) gtgccggtgGCAGGTTTACCGCCCTGACTGTCTTTCACCTGGTAAGACCTGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGCGTCTTCCACTTCAAAATGCAGCATATCGCCGTCATCGTAgcgcacg > 2:4512564/1‑140 (MQ=255) gtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCa < 1:7943540/107‑1 (MQ=255) gtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacg < 2:3722031/140‑1 (MQ=255) gtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacg > 2:381706/1‑140 (MQ=255) gtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacg > 1:3320587/1‑140 (MQ=255) gtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacg > 1:8706846/1‑140 (MQ=255) gtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacg > 2:10447771/1‑140 (MQ=255) gtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTGCATCGTAgcgcacg > 2:670383/1‑140 (MQ=255) gtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCACATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacg < 2:8072538/140‑1 (MQ=255) gtgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGGACTACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGGCTTCCACTTCAAAATGCAGCATATCGCCTGCCTCGTAgcgcacg > 2:3327414/1‑140 (MQ=255) tgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacgc < 1:1667971/140‑1 (MQ=255) tgccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacgc < 1:5873568/140‑1 (MQ=255) gccggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacgcg > 2:8682878/1‑140 (MQ=255) gccggtgGCAGGTTTACCGCCATGACTGACTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacgcg < 2:6155196/140‑1 (MQ=255) gccggggGCAGGTTTCCCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacgcg < 1:3470674/140‑1 (MQ=255) ggtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTACTACATGGCG‑AAAGTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAgcgcacgcgcac > 2:1979438/1‑140 (MQ=255) gtgGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGcgcacgcgcacg < 1:8852762/140‑1 (MQ=255) tgGCAGGTTTACCGCCATGACTTTCTTTCCCCTGGTAATACAGTGCG‑AAATTTTATCCAGCTCAGCCTGCGGAATGCCGATACCAGCGTCTTCCACTTCAAAATGCAGCATCTCGCCTTCATCGTAGCGCACGCTCACgg < 2:2646233/140‑1 (MQ=255) ttACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTgg < 1:2013340/140‑1 (MQ=255) tACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCACAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGc < 2:2967965/140‑1 (MQ=255) aCCGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGcc > 2:7917201/1‑140 (MQ=255) cGCCATGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCtt > 2:3444977/1‑140 (MQ=255) aTGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTg > 1:7424242/1‑140 (MQ=255) tGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTgg < 1:8040634/140‑1 (MQ=255) tGACTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTgg < 1:4919358/140‑1 (MQ=255) aCTGTCTTTCACCTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGt < 1:1208331/140‑1 (MQ=255) ccTGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACgg < 2:10257744/140‑1 (MQ=255) tGGTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCg < 2:2379518/140‑1 (MQ=255) tGGTAATACATGGCG‑AAATTTTATCCAGCTCACCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCg < 1:3830534/140‑1 (MQ=255) ggTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACTGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGt > 2:10806323/1‑140 (MQ=255) ggTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGt < 2:10585377/140‑1 (MQ=255) ggTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGt > 1:2773688/1‑140 (MQ=255) ggTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGt > 1:7262344/1‑140 (MQ=255) ggTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGt > 1:6501913/1‑140 (MQ=255) ggTAATACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGt > 2:4263883/1‑140 (MQ=255) tAATACATGG‑GGAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAACAGAGTATTGCACGTCAAAATGCAGCATATCGACATCATCTTAGCGCGCGCGCACGGTAACCTGGCCTTGGTGGGTTATTTTGTCggaggta > 2:9713726/1‑135 (MQ=255) aaTACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGTTAc < 1:3380685/140‑1 (MQ=255) aaTACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGTTAc < 2:9255290/140‑1 (MQ=255) tACATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGTTACtg > 1:5293191/1‑140 (MQ=255) aCATGGCGAAAA‑TTTCTCCAGCTCATCCTGCGGCATGCCGATACCAGCGACTACCACTTCAACAGGCAGCATCGCGCCGACATCGTAGCGCACGCGCACGGTAACCTGGCCGTGCTGGGTGAATTTGACGGCGATACtga < 2:4829018/140‑1 (MQ=255) aCATGGCG‑AAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGTTACtga < 2:8420397/140‑1 (MQ=255) | GAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCCACTTCAAAATGCAGCATATCGCCTTCATCGTAGCGCACGCGCACGGTAACCTGGCCTTGCTGGGTGAATTTGACGGCGTTACTGATGAGG > NZ_CP025268/3352221‑3352496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |