| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,075,379 | +G | intergenic (+21/+234) | ymdF → / ← rutG | general stress protein/pyrimidine utilization transport protein G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,075,379 | 1 | . | G | 99.4% | 1834.2 / 1.3 | 528 | intergenic (+21/+234) | ymdF/rutG | general stress protein/pyrimidine utilization transport protein G |
| Reads supporting (aligned to +/- strand): ref base . (0/3); new base G (227/297); total (227/301) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
Only 100 of 541 total aligned reads displayed.
CAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATGACGAA‑T‑CATTTTT‑G‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTG > NZ_CP025268/1075240‑1075510 | gCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑tgcatt < 1:9794848/140‑6 (MQ=255) cAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCAttt < 2:8603954/140‑1 (MQ=255) aGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCAtttt < 1:6849664/140‑1 (MQ=255) ggTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTCAAACAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCAttttt > 2:7294625/1‑140 (MQ=255) ggTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCAttttt > 2:704953/1‑140 (MQ=255) cgTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCAttttt < 2:10732592/139‑1 (MQ=255) gTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑g > 2:4231847/1‑140 (MQ=255) gTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑g > 1:5034678/1‑140 (MQ=255) aGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAg < 2:5270206/140‑1 (MQ=255) tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTc > 1:9253232/1‑140 (MQ=255) ggACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCg > 2:11301272/1‑140 (MQ=255) ggACAGCACAGCGCGGGTAATTTCAAGAATGACCAGCAGAGCGCATCTGAAGCAGGTAAAAAAGGTGTTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTCTAGCTCg > 2:8999710/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCaaat > 1:9531895/1‑139 (MQ=255) gggggTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCAt > 1:4749014/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc < 2:2865966/140‑1 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:2805197/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:7507511/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:7770420/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:9749034/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 2:2591291/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:10942063/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:10014995/1‑140 (MQ=255) aaTTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAccgc < 1:6609770/140‑1 (MQ=255) aaTTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAccgc < 2:663626/140‑1 (MQ=255) aaTTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAccgc < 2:10172313/140‑1 (MQ=255) aTTTCAAGAATGACCCGCCGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAccgcc > 2:8111736/1‑140 (MQ=255) ttCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCgg > 1:6943228/1‑140 (MQ=255) cAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGtt > 1:516313/1‑140 (MQ=255) aGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAc < 2:4115913/140‑1 (MQ=255) aGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAc < 2:2494491/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAGAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:867969/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:3670563/140‑1 (MQ=255) gACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:1474113/138‑1 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 2:211022/1‑140 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 2:3690956/1‑140 (MQ=255) cccGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg > 1:9645387/1‑136 (MQ=255) ccGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtggt < 2:3215756/140‑1 (MQ=255) ccGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtggt < 1:10408270/140‑1 (MQ=255) cGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGtt > 1:3312973/1‑140 (MQ=255) cAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGa > 1:2188819/1‑140 (MQ=255) gcgcgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATa < 2:3956576/140‑1 (MQ=255) cgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtg > 1:3053992/1‑140 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 1:1771849/140‑1 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 1:6307415/140‑1 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCAATTTT‑GTCTGTATCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 2:5935390/140‑1 (MQ=255) cTGTAGCAGGTAAAATAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGTA‑TGCATTTTT‑GTCTGTAGCTCGTCAAATAGCCATCACCGCCGGTTTCCCGGTGGTTGATACTGATGAc < 2:10931554/140‑1 (MQ=255) aGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAAGG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATAGTGATGACAAAt < 2:7873945/140‑1 (MQ=255) aGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTa < 2:1660213/140‑1 (MQ=255) ggTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTaa > 1:1461282/1‑140 (MQ=255) gTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAg < 2:1942082/140‑1 (MQ=255) aaaGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTTCCCGGTGGTTGATACTGATGACAAATGTAAGCTTGc < 1:7188732/140‑1 (MQ=255) ggtggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTg < 1:11055733/140‑1 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtggt > 1:1217225/1‑108 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:8991249/1‑140 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:8854253/1‑140 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:377634/1‑140 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:10263599/1‑140 (MQ=255) ggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATg > 2:2957549/1‑140 (MQ=255) tAAGCGCAGTCACGGCAAAAGCGACAACTCGCCGGGCGACTCAATGACGCA‑TGCAATTTT‑GTCTGGAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:3819080/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:265391/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:9288421/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:1310611/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:8452036/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:1955267/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:2079068/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:7388619/140‑1 (MQ=255) gagCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGa < 2:9883113/140‑1 (MQ=255) agCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGAt < 1:10111465/140‑1 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa < 2:7469362/140‑1 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa < 2:3402370/140‑1 (MQ=255) tCAAGGCAAAAGCGACAACTAGCCGGGCTAAACAAAGACGAA‑TGCAATTTT‑GTCAGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGAGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa < 2:10043364/140‑1 (MQ=255) aCGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATc < 1:295796/140‑1 (MQ=255) gCAAAAGCGACAACTATCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 2:970650/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 2:10415690/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 2:4508197/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 2:2155157/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 1:8111737/140‑1 (MQ=255) aaaaGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGcc < 2:6158948/140‑1 (MQ=255) aGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtggt < 1:6371101/86‑1 (MQ=255) aGCGACAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTAc > 1:3409724/1‑140 (MQ=255) aCAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCaga > 1:11422/1‑140 (MQ=255) caccTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCagaa < 2:4983565/137‑1 (MQ=255) cAACTAGCCGGGCTAATCAATGACGAA‑TGCATTTTTAT‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTGTCAGGCCTACCagaa < 1:3868688/140‑1 (MQ=255) aCTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCagaaga < 1:5598838/140‑1 (MQ=255) aCTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCagaaga < 2:8248693/140‑1 (MQ=255) cTAGCCGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGAt < 1:10699811/140‑1 (MQ=255) agccGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTg < 1:4623742/138‑1 (MQ=255) gccGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAAGGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGc > 2:9180895/2‑140 (MQ=255) ccGGGCTAATCACTGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGAGTGCa < 2:6360328/140‑1 (MQ=255) ccGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 1:5352124/140‑1 (MQ=255) ccGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 1:4231847/140‑1 (MQ=255) ccGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa > 1:1574277/1‑140 (MQ=255) ccGGGCTAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:5592937/140‑1 (MQ=255) tAATCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 1:4055891/140‑1 (MQ=255) tAATCAATGACGAA‑TGCATTATA‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 1:1682952/140‑1 (MQ=255) aTCAATGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTg > 1:429187/1‑140 (MQ=255) aaTGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAAt < 1:11315651/140‑1 (MQ=255) tGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAAttt > 1:5822422/1‑140 (MQ=255) tGACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAAttt < 1:2426017/140‑1 (MQ=255) gACGAA‑TGCATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCGTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTg < 2:4783323/140‑1 (MQ=38) | CAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATGACGAA‑T‑CATTTTT‑G‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTG > NZ_CP025268/1075240‑1075510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |