| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,075,387 | +T | intergenic (+29/+226) | ymdF → / ← rutG | general stress protein/pyrimidine utilization transport protein G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,075,387 | 1 | . | T | 98.7% | 2124.1 / 12.2 | 552 | intergenic (+29/+226) | ymdF/rutG | general stress protein/pyrimidine utilization transport protein G |
| Reads supporting (aligned to +/- strand): ref base . (3/4); new base T (219/325); total (222/330) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 564 total aligned reads displayed.
GTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATGACGAAT‑‑CATTTTT‑G‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTG > NZ_CP025268/1075249‑1075520 | tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTc > 2:137933/1‑140 (MQ=255) ggACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCg > 1:9945428/1‑140 (MQ=255) ggACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCg > 2:7007192/1‑140 (MQ=255) acagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCaaaaa > 2:4164354/1‑140 (MQ=255) acagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCaaaaa < 1:4437605/140‑1 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:10014995/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:7507511/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 2:8239764/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:10942063/1‑140 (MQ=255) aaTTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAccgc < 2:10172245/140‑1 (MQ=255) aaTTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAccgc < 2:728052/140‑1 (MQ=255) aaTTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCAccgc < 2:663626/140‑1 (MQ=255) ttCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCgg > 1:6680889/1‑140 (MQ=255) gAATGCCCCGCAGCGCGCATCTGCAGCAGGTCAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACGAGCCGGGCTAATCACTGACGACTGCCATTTTG‑T‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 2:7910304/140‑1 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 1:9755446/140‑1 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 1:5125704/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:2448222/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:3456046/140‑1 (MQ=255) gACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggt < 1:11378098/140‑1 (MQ=255) gACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggt < 2:6261162/140‑1 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATTTCGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 2:10762048/1‑140 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 1:2065086/1‑140 (MQ=255) cccGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:9645386/136‑1 (MQ=255) ccGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtggt < 1:6386611/140‑1 (MQ=255) cGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGtt > 1:3312973/1‑140 (MQ=255) cAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGa > 1:2188819/1‑140 (MQ=255) cAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGa > 1:9001403/1‑140 (MQ=255) gcgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACt < 2:4942434/140‑1 (MQ=255) cgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtg > 1:3053992/1‑140 (MQ=255) cgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtg > 1:4947931/1‑140 (MQ=255) cTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGAc < 1:9731251/140‑1 (MQ=255) gCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATg > 2:2942792/1‑140 (MQ=255) cAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGt > 2:11156547/1‑140 (MQ=255) ggTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTaa > 1:1461282/1‑140 (MQ=255) gTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAg > 1:8370720/1‑140 (MQ=255) tAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGc > 2:6375171/1‑140 (MQ=255) tAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGc > 1:6867595/1‑140 (MQ=255) aaaGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTTCCCGGTGGTTGATACTGATGACAAATGTAAGCTTGc < 1:7188732/140‑1 (MQ=255) ggtggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTg < 1:11055733/140‑1 (MQ=255) ggtggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTg < 2:5066703/140‑1 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtggt > 1:1217225/1‑108 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtggt < 2:1217225/108‑1 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:10263599/1‑140 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 2:3695196/1‑140 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:8496180/1‑140 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:8855448/1‑140 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:4732794/1‑140 (MQ=255) ggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGAc > 2:3832880/1‑120 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:2498477/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:7388619/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:10407524/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:5437999/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:265391/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:9288421/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:2883786/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:3730977/140‑1 (MQ=255) agagCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGcgcg < 2:2118949/140‑1 (MQ=255) gagCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGa < 2:9883113/140‑1 (MQ=255) agCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGAt < 1:9567443/140‑1 (MQ=255) agCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGAt < 1:10111465/140‑1 (MQ=255) agCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGAt < 2:2681111/140‑1 (MQ=255) cAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGc > 2:4590645/1‑140 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAATGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 1:4277389/1‑140 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 2:3306890/1‑140 (MQ=255) aCGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATc < 1:295796/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 2:7624869/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 1:5307315/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 1:9326095/140‑1 (MQ=255) aaaaGCGACAACTAGCCGGGCTAATCACTGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGcc < 2:10452678/140‑1 (MQ=255) aaaaGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGcc < 2:1953470/140‑1 (MQ=255) aGCGACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTAc > 1:4199655/1‑140 (MQ=255) gACAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCag < 1:8701505/140‑1 (MQ=255) aCAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCaga > 1:1881067/1‑140 (MQ=255) cAACTAGCCGGGCTAATCAATGACGAATG‑CATTTTTAT‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTGTCAGGCCTACCagaa < 1:3868688/140‑1 (MQ=255) aaCTAGCCTGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAAGGTAAGCTTGCCTGATGCGCGATGCTGATCAGGCCTACCagaag > 2:6019757/1‑140 (MQ=255) aCTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTATCTCGTCAAAAAGCCTTCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCATACCagaaga < 2:5627070/140‑1 (MQ=255) aCTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCagaaga < 1:6284727/140‑1 (MQ=255) aCTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCagaaga < 1:5971435/140‑1 (MQ=255) cTAGCCGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGAt < 1:10699811/140‑1 (MQ=255) gagccGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGAtt < 2:9170199/137‑1 (MQ=255) agccGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTg < 1:173512/138‑1 (MQ=255) ccGGGCTTATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:3561708/140‑1 (MQ=255) ccGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 1:771908/140‑1 (MQ=255) ccGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:4414666/140‑1 (MQ=255) ccGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:8991248/140‑1 (MQ=255) ccGGGCTAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 1:15856/140‑1 (MQ=255) tAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCACACAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 1:3666500/140‑1 (MQ=255) tAATCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 1:4055891/140‑1 (MQ=255) aTCAATGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTg > 2:1635607/1‑140 (MQ=255) aaTGACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAAt < 1:11315651/140‑1 (MQ=255) gACGAATG‑CATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGACGATTGCAATATATTGAATTTg > 2:5484451/1‑140 (MQ=39) cgaatgcATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATTACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCa < 2:222515/134‑1 (MQ=38) cgaatgcATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCa < 1:5648094/134‑1 (MQ=255) cgaatgcATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCa < 2:3021656/134‑1 (MQ=255) cgaatgcATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCa < 1:7878713/134‑1 (MQ=255) cgaatgcATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCa < 2:8659136/134‑1 (MQ=255) gaatgcATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCAc < 2:8035501/135‑1 (MQ=255) aatgcATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACt < 2:3963217/136‑1 (MQ=255) atgcATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTg < 2:1791483/137‑1 (MQ=255) tgcATTTTT‑GTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTGATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGt < 1:704722/138‑1 (MQ=255) | GTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATGACGAAT‑‑CATTTTT‑G‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTG > NZ_CP025268/1075249‑1075520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |