| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,374,862 | (T)8→9 | intergenic (+40/‑172) | pspE → / → ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,374,854 | 1 | . | T | 92.8% | 1688.4 / 122.7 | 552 | intergenic (+32/‑180) | pspE/ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Reads supporting (aligned to +/- strand): ref base . (21/18); new base T (301/205); total (323/229) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.22e-01 | |||||||||||
Only 100 of 580 total aligned reads displayed.
GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGA > NZ_CP025268/1374716‑1374991 | ggCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑tttt‑tttttctgt < 1:10125172/140‑6 (MQ=255) caagcaaAAGAGATCCTTAGCGCGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTca < 1:10452509/140‑1 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGTTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTca < 2:7432251/140‑1 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTca < 1:6727302/140‑1 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTca < 2:4182390/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGTTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTcac < 2:8622653/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTcac > 2:4711943/1‑140 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTcac > 2:2696153/1‑140 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTcac < 2:6190939/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTcac < 1:100040/140‑1 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTTACAcc < 1:11375100/140‑1 (MQ=255) aaaGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCtt < 2:8121604/140‑1 (MQ=255) aTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTAc > 1:3244898/1‑140 (MQ=255) aTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTAc < 2:10379353/140‑1 (MQ=255) tCCTTAGAGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACa < 1:5628635/140‑1 (MQ=255) cTTAGCGAGATGGGATATACCCAGGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATc < 2:6997564/140‑1 (MQ=255) cTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATc < 1:3622402/140‑1 (MQ=255) tAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCAGGAGCGGCGCGTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATccc > 2:3639619/1‑140 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCa < 2:4026124/140‑1 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCa < 1:4633367/140‑1 (MQ=255) cGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCAt > 2:4858394/1‑140 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTAACACCTTATTTACATCCCCATAGa > 1:3371498/1‑140 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTAACACCTTATTTACATCCCCATAGat > 1:2208917/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGt > 2:5480666/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGt > 2:963651/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGt > 1:10597443/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCGTATTTGCAGACCCATAGATTATTTGCgg > 1:8454952/1‑139 (MQ=255) aCGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTCTGCGCCGTTTTT‑TTTTCTTTCACACCGTATTTACATCCCCATAGATTATTTGCGTCAGc > 2:10008703/1‑140 (MQ=255) aCGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGc > 2:5702797/1‑140 (MQ=255) cGTTGATAACGCCGGTGGCATTAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt < 2:6617404/140‑1 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAATGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTATGTCACACATTAATTACAGCCCCATAGATTATTTGCGTCAggt > 1:9624925/1‑138 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTGTGTGACACCGTATTTACATACCCATAGATTATTTGCGTCAGCt > 1:1213464/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCggccgcg > 1:6997765/1‑134 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:11085611/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt < 1:980761/140‑1 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 2:5993486/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:7244791/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTATGTCACACCGTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:259435/1‑140 (MQ=255) ttGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTCTGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTca > 1:4854995/1‑140 (MQ=255) ttGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTca > 2:6364630/1‑140 (MQ=255) aaCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGAGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt > 2:11380942/1‑140 (MQ=255) aaCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGGTAACAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt > 2:5000612/1‑140 (MQ=255) aCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATa < 1:3911332/140‑1 (MQ=255) ccGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATACCCATAGATTATTTTCGTCAGCTCACAAATAAGc > 1:2742953/1‑140 (MQ=255) ccGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACAACTTATTTACATCACCCTAGAATATTTGCGTCAGCAAACAAATACGc > 2:2305548/1‑140 (MQ=255) ccGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTATGTGACACCCTATTTACAACCCCCTAGATTATTTTCGGCAGCACACaaaaaacc > 1:776622/1‑135 (MQ=255) gCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTc > 1:8708620/1‑140 (MQ=255) aCATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaa < 1:6537930/140‑1 (MQ=255) aCATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaa < 1:4036062/140‑1 (MQ=255) cATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTATGTAACACCATATTTACATACCCATATATTATTTGCGTCAGCTCACAAATACGCTTTTTACCTGGTaaaa > 1:9034914/1‑140 (MQ=255) ctCGCAATGCCGACGGTCACAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaa < 1:832177/139‑1 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTGTTTCACACCGTATTTAAAACCCCAAAGATTATTTGCGTCAGCTCACAAATAAGCATTTTACCTGGTaaaaa > 1:8803123/1‑140 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaa > 2:1512818/1‑140 (MQ=255) cAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTATGTGACACCTTATTTAAATACCCAAAGATTATTTTCGGCAGCGCACAAAAAAGCATTTTGACAGGTgaaaaaata > 1:3055688/1‑137 (MQ=255) tGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGAttt > 2:7223737/1‑140 (MQ=255) gCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTc > 2:1917603/1‑140 (MQ=255) ccGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCCTAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCGGGTAAAAAATGATTTcc > 2:10458979/1‑140 (MQ=255) ccGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTcc > 2:5289611/1‑140 (MQ=255) aaGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCCCAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGc > 1:5974209/1‑140 (MQ=255) atgTCAAATGTTAAAACAATTCACCAAGAGAGGCGTTTATCCCCCGAATTT‑ATTTCTGACACACCTTAATTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTTAAATATGATTTCCTTCg < 2:11278686/138‑1 (MQ=255) cAAAGGTTAAAAGACTTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCAGAGATTATTTGCGTCAGCTCACCAATACGCTTTTTACCGGGTAAAAAATGATTTCCTGCGTGAc > 2:10961911/1‑140 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACtc > 2:9364311/1‑139 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTAGTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTa > 2:2974375/1‑140 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTaa < 1:2905429/140‑1 (MQ=255) ttAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAAACGCTTTTTACCTGGTAAAAAATTATTTACTGCGTGAATaaaaa > 1:9301517/1‑139 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTTTTTCACACCATATTTAAAAACCCATAGATTATTTTCGGCATCTCACAAAAAAACTTTTTACCAGGTTAAAAATGATTTACAGCGTGTCTAAAAacc > 1:5126343/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTTCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTACAGCGTGACAAAAAccc > 2:7945138/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAAccc < 1:1635532/140‑1 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTAATTGCGTCAGCTCACAAATACGCTTTTTACCTGGTAAAAAATGATTTCCTGCGTGACTAAAAacc > 2:1070681/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCATATTTAAATCCCCAAAGATTATTTTCGTCAGCTCACAAAAACGCATTTTACCAGGGAAAAAATTATTTCCGGCGTGTCTAAAAccc > 1:1754351/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCAAACCTTATTTACATCCCCATAGATTATTTTCGTAAGCTCACAAATACGCATTTTCCCATGTAAAAAATGATTTACTGCGTGACGAAAAccc > 1:1990964/1‑140 (MQ=255) aaaaGAATTCACAATGAGAGGCGCTTATGCGCCGTTTTT‑TTTTCTGTAAAAACATAAATACAACCCCATAGATTATTTTCGTAATCTCAAAAATACCATTTTTCCCAGTTAAAAAATGATTTCCTGCGTGACTAAAAcac > 2:1312710/1‑138 (MQ=255) aaaGAATTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTATGTGACACCTTATTTAAATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTACCGGGTAAAAAATGATTTACTGCGTGTCTAAAAaccg > 1:6376624/1‑139 (MQ=255) aaTTCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTtgtg < 1:5760375/140‑1 (MQ=255) aTTCACCATGAGCGGCGCTTATGCGCCG‑TTTTATTTTCTGTCACACCTTATGTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGc < 2:2876036/140‑1 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCt > 1:6880181/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACAACCCCATAGATTATTTTCGTCAGCTCACAAATACGCTTTTTGCCTGGTAAAAAATTATTTCCGGCGTGACTAAAACCCTTGTGCt > 1:3751830/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTATGTCACACCTTATTTAAATCCCCATAGATTATTTGAGTCAGCACACAAAAAAGCTTTTTCACATGTAAAAAATTATATCCTTAGTGAAAAAAAACCATGTTCt > 2:3067402/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTATGTCACACCATATTTAAAAACCCAAAAATTATTTTCGTCAGCGCACAAAAAAGCATTTTACCTGGTAAAAAATGNTTTGCTGCGTGTCTAAAACCCATGTGCt > 1:6091238/1‑140 (MQ=255) gtCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCGAGAGATTAGGTGCGTCTGCTCCCAAATTCGCTTTTTCCCTGGGACTAACTGATGTCCGGCGTGTCTCAAAGCCTGGTGCt > 2:11173639/2‑140 (MQ=255) tCACCATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTc > 2:8347818/1‑140 (MQ=255) ccATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAAt < 2:3212032/140‑1 (MQ=255) ccATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAAt < 1:1082985/140‑1 (MQ=255) cATGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTAACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATAAGCTTTTTACCTGGTAAAAAATTATTTCCTGCGTGACTAAAACCCTTGTGCTCAAtt > 2:3460723/1‑140 (MQ=255) aTGAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTg < 2:675799/140‑1 (MQ=255) tGAGCGGCGCTTATGCGCCGTTTTT‑TTTTATGTCACACCATATTTAAAAACCCATATATTATTTTCGTCAGCTCACAAATAAGCATTTTACCATGTAAAAAATTATTTACAGCGTGACTAAAAACCTTGTGCTccaatta > 1:4273950/1‑134 (MQ=255) gAGCGGCGCTTATGCGCCGTTTTT‑TTTTGTTTCACCACGTATTTACAACCCCATAGATTATTTTCGTCAGCGCCCAAATAAGCATTTTCCCGGGTAAAAAATGATTTCCTGCGGGACAAAAAACCGTGTTCTCAAATGAc > 1:5453935/1‑140 (MQ=255) gAGCGGCGCTTATGCGCCGTTTTT‑TTTTGTTTCACACCTTATTTACATACCCAAAGATTATTTGCGTAAGCTCACAAATAAGCTTTTTAACAGGTAAAAAATGATTTACTGCGTGACTAAAAACCGTGGGCTCaaattaa > 1:7948376/1‑135 (MQ=255) gAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAc < 1:7370903/140‑1 (MQ=255) gAGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAc < 1:9524619/140‑1 (MQ=255) gAGCGGCGCTAATGCGCCG‑TTTTATTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTACCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAc < 2:4318372/140‑1 (MQ=255) aGCGGCGCTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATAAGCTTTTTCCCTGGTAAAAAATTATTTCCTGCGTGACTAAAAACCTTGTGCTCAATTGACa > 2:1732472/1‑140 (MQ=255) gcggcgCTTATGCGCCGTTTTT‑TTTTATGTCACACCATATTTAAATCCCCCTAGATTATTTTCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAAAg > 1:7515165/1‑140 (MQ=255) gcggcgCTTATGCGCCGTTTTT‑TTTTATGTCAAACCATATTTAAATACCCATAGATTATTTGCGTCACCACACAAAAAACCATTTTACCAGGTAAAAAAAGATTTCCAGCGTGACTAAAACCCATGTGCTCAATTGACAg > 1:1524758/1‑140 (MQ=255) gcgcTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGttt > 2:8732318/1‑140 (MQ=255) cgcTTATGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACa > 2:9071344/1‑41 (MQ=255) gcTTATGCGCCGTTTTT‑TTTTATGTAACACCATATTTTCAACCCCATATATTATTTTCGTCAGCAAAAAAAAAAGCAATTTACCTGGTAAAAAAATAATTACAGCGGGACTAAAAACCATTTTCTCAATTGACAGTTTAt > 1:4525281/1‑140 (MQ=255) gttAGGCGCCGTTTTT‑TTTTCTGTCACACCTTATTTACAGCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTACTGCGTGACTAAAAGCCTTGTGCTCAATTGACAGTTTAtt < 1:387255/139‑1 (MQ=255) aTGCGCCGTTTTT‑TTTTCTTTCACACCTTATTTACATCCCCATAGTTTAGTTGCGTAAGCTCACAAATACGCATTTTCCCTGGTAAAAAATGATTTCATGCTTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTc > 2:7817870/1‑140 (MQ=255) agcgcCGATTTA‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCt < 1:11207125/139‑1 (MQ=255) | GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑TTTT‑TTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGA > NZ_CP025268/1374716‑1374991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |