| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,701,269 | +A | intergenic (‑380/+10) | uidA ← / ← uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,701,265 | 1 | . | A | 93.3% | 2657.4 / 154.6 | 729 | intergenic (‑376/+14) | uidA/uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Reads supporting (aligned to +/- strand): ref base . (24/25); new base A (335/343); total (360/369) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 756 total aligned reads displayed.
AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑AAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAA > NZ_CP025268/1701126‑1701399 | aGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCccgccg > 2:4400096/1‑140 (MQ=255) aTTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACTCGGGCACAGTTATCACCAGCCCGCCG‑aaa‑aa < 2:7997631/140‑2 (MQ=255) aaCGATTAACTCTCATGACATATGGCTACAGTGATTATGTTGGGGGGAATTCTCCGAAGCGGGGCAGGATAATTTTTGCACAGAGAAATTAGGATATGATTCGCGGGCACAGTTATCACCAGCCCGCCG‑AAA‑a‑ggtgaga > 2:1657102/1‑134 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑AAa‑a‑‑agagagt > 1:9158803/1‑139 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑AAA‑a‑‑agagaga > 1:7257810/1‑140 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑AAA‑a‑‑agagaga > 1:3403402/1‑140 (MQ=255) aaCGATAAACTCTCATGAAATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCTGGCACAGTTATCACCAGCCCGCCG‑AAA‑a‑‑agagaga > 1:4128425/1‑140 (MQ=255) gATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGATAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGaa > 1:167458/1‑140 (MQ=255) tAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATc > 1:6828763/1‑140 (MQ=255) ctctCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGa < 1:11201288/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGAt < 1:7023928/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGAt < 2:562634/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGAt < 2:1916444/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGAt < 2:11027328/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGAt < 1:3225139/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGAt < 1:10457109/140‑1 (MQ=255) ctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATg < 1:4889790/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGc < 1:10062717/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGc < 2:4996055/140‑1 (MQ=255) tGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGt > 2:3314560/1‑140 (MQ=255) tGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGt < 1:10714049/140‑1 (MQ=255) tGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGAGAATTTTTGCACTGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAAGCAGGATGCGGt < 2:2701994/140‑1 (MQ=255) tatGGCTACCGTGACTATTTGGGGGGGAATTCAACGAAGCCGGGAAGGATAAATATTGCACAGAGAACTTACGAAATGAAACGCGGGCACAGTTATAACCAGCCCGCCGAAAA‑A‑GAGAGAGACTCAGGATCCGGTTAAGa > 2:76486/1‑140 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGa < 1:1248551/140‑1 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGAGATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGa > 1:6440031/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGAtc > 2:8382174/1‑139 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa < 2:7460122/140‑1 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa > 1:1852334/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa < 2:236429/140‑1 (MQ=255) aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa > 1:956869/1‑140 (MQ=255) tGACTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatc > 2:9239566/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATCCCGCCAatcct > 2:7190370/1‑138 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat < 1:4340340/140‑1 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 1:6626829/1‑140 (MQ=255) aaTAGTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATAGGAAACGCGGGCCCAGGTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAaacat > 2:10614274/1‑140 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg > 1:9623192/1‑140 (MQ=255) tGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGt < 2:8597090/140‑1 (MQ=255) ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTa > 1:8323255/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGACTCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 2:10228482/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 2:8989844/1‑140 (MQ=255) aaTTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGTGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCt > 2:5760031/1‑140 (MQ=255) ccGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgacg < 2:9791498/140‑1 (MQ=255) ggAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACTGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCtt < 1:8970794/140‑1 (MQ=255) gATAATTTTTGCACAGAGAAATTACGNTATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAANCGACGCTTCAcgc < 1:6062951/140‑1 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 1:8897777/140‑1 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 2:6961980/140‑1 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGAGGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 1:3028844/140‑1 (MQ=255) gagaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCt < 1:2855781/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 1:9741584/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt > 1:2521759/1‑140 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 1:7862867/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt > 2:304324/1‑140 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt > 1:2153625/1‑140 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:11344860/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:4181893/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:5977941/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:10806088/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:930917/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:1036989/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 1:6270269/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 1:9935297/140‑1 (MQ=255) ctatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:9530278/139‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:11063767/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 2:6155642/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:1398309/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:7542077/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:3912818/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:544538/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCACCAGGTCTTCCGCTTCGATATCGGc > 2:11132144/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑AAA‑ATGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 2:1432237/1‑140 (MQ=255) agatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTACTCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 2:4605147/3‑140 (MQ=255) atGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCa > 1:10184544/1‑140 (MQ=255) atGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCa > 2:9397609/1‑140 (MQ=255) tGAAACGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAg > 2:8889574/1‑140 (MQ=255) caaCGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:1216161/139‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGTTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:2088075/140‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 1:2340646/140‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:3719975/140‑1 (MQ=255) aaaCGCGGGCACAGGTATCACCAGCCCGCCG‑AAACA‑GAGAGAGAATCAGGATGCGGTTAAGAGACCGCCAATCATCGCGCGTAAGCCCGGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:8167404/140‑1 (MQ=255) aaCGCGGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTac > 1:7706659/1‑140 (MQ=255) cgcgGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTacac > 1:814065/1‑140 (MQ=255) cgGGCACAGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCg < 1:2624427/140‑1 (MQ=255) caGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 1:3665404/140‑1 (MQ=255) caGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 2:6567777/140‑1 (MQ=255) caGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 1:5031831/140‑1 (MQ=255) caGTTATCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCAACGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 2:9902660/140‑1 (MQ=255) aTCACCAGCCCGCCGAAAA‑A‑GAGAGAGACTCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTCGGTCAGATc > 2:4332115/1‑140 (MQ=255) aTCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATc < 2:62993/140‑1 (MQ=255) tCACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATcc < 2:480862/140‑1 (MQ=255) cACCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCca > 1:5210510/1‑140 (MQ=255) aCCAGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcag > 1:4792072/1‑140 (MQ=255) aGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 1:8529790/1‑140 (MQ=255) aGCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 1:10913625/1‑140 (MQ=255) gCCCGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGt < 1:5490096/140‑1 (MQ=255) cccGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:5780583/1‑140 (MQ=255) cccGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:459718/1‑140 (MQ=255) cccGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:2811127/1‑140 (MQ=255) cccGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:5217616/1‑140 (MQ=255) cccGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:9643270/1‑140 (MQ=255) cccGCCGAAAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTACGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:3932552/1‑140 (MQ=255) | AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑AAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAA > NZ_CP025268/1701126‑1701399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |