| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,826,683 | (A)7→8 | intergenic (‑247/+51) | chbB ← / ← osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,826,676 | 1 | . | A | 95.8% | 2669.0 / 85.7 | 713 | intergenic (‑240/+58) | chbB/osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Reads supporting (aligned to +/- strand): ref base . (25/5); new base A (430/253); total (455/258) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.09e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 718 total aligned reads displayed.
GTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCC‑‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826538‑1826810 | taCGGACTAGACCTGCGCTCGAGTATTTCTATGACCCGATCACGTGTTCCTCCATGACCTGTGGTTATGACCCTCTGCCCATTTCGGGCAAATAATTCGCGAAGATCCTTCAGACCTCA‑GGCC‑‑ACAA‑AA‑AACCGGCGCaa < 2:11327754/140‑1 (MQ=255) aCGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAAt > 2:5170201/1‑140 (MQ=255) gTATAGACCTGAGCATGAGTATTTCTTTGACCTTATAATTTGTTTCTCCTTGACCTGTGGTTATGACCATCTTCACATTTCGGGCAAATAATTAGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGTCGCAATGGc < 2:7295784/140‑1 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGcc > 1:9864301/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCg > 1:6059663/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGt > 1:3728383/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGt > 2:8976149/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGt > 2:3126651/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGt > 1:6992819/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTACACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGt < 2:2703116/140‑1 (MQ=255) gAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGgcg > 2:2563180/1‑123 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGACGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 2:1762013/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCAAA‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgt > 2:2066950/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCACTGGCCGGTTTCCgtt > 1:2325637/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 2:4690387/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 1:6218768/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 1:5457350/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 2:10797609/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 2:7107540/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 1:8006268/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 1:8417927/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 2:1536782/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 2:1612922/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 1:2719417/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTCCCgtt > 1:10588102/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCGCCTTGACCTGTGGTTATGACCCTCGTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCC‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCgtt > 2:914659/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCGTATAAATTGGTTCTCCTTGACCTGTGGTTATGACCCTCTTCACAGTTCGGGCAAATAATTCGCGACGAGAATAAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCCAAGGCCGGTTTCCgtt > 2:3437525/1‑140 (MQ=255) aGCAATAGGATTTCTTTGACCTTATAACTTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCggt > 2:2181848/1‑138 (MQ=255) aGCAAGAGTATTTCTTTGACCTTATAAATTTTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATCATTCGCGAAGATAATTAAGAACTCA‑GGCC‑‑A‑AATAA‑AACCGGCGCAATGGCCGGTTTCCgtt > 2:1248276/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTAc > 2:8243770/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTAc > 1:10717459/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTAc > 2:6225937/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCAGGTTTCCgttgtact > 1:10424204/1‑137 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAg > 2:10668046/1‑140 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAg > 1:8123939/1‑140 (MQ=255) cTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAATTAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCtt > 2:9432182/1‑140 (MQ=255) ttGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTc > 2:5849180/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 1:4879731/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 1:253313/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 1:8858886/1‑140 (MQ=255) ttGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGAtt < 1:9963517/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 2:3656844/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:449744/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:6477287/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:2343865/140‑1 (MQ=255) ttGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGc < 1:2208877/140‑1 (MQ=255) ttGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGc < 2:1042683/140‑1 (MQ=255) aCCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACCTCGCAGCCtg < 2:10109046/140‑1 (MQ=255) aCCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTGACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCtg > 1:11249469/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 1:8728353/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 1:341430/1‑140 (MQ=255) gTTATGACCCTCTTCACATTTCGTGCAAATAATTCGCTAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 1:1205954/140‑1 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 1:461655/140‑1 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 1:2069926/140‑1 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAAGAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 2:10271666/140‑1 (MQ=255) aTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtg > 1:5099668/1‑140 (MQ=255) aTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtg > 2:8060395/1‑140 (MQ=255) aTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtg < 2:63407/140‑1 (MQ=255) tGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtgt > 1:3548212/1‑140 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 1:4260392/140‑1 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:11055531/140‑1 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTa > 1:3175153/1‑140 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTa > 1:1000122/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:4138874/118‑1 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt > 2:7916230/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt > 2:6900494/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt < 2:2931178/140‑1 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 2:6713014/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 2:4861817/1‑140 (MQ=255) ctTCACAATTCGGGCAAATAATTCGCGAAGATAATTAAGAAGTCATGACG‑‑A‑AA‑AT‑AACCGGCGCAATGGACGGTTTCCGGTGGTACTCAAGCTTTCAGGCGACTGGATTACTTAGCAGACTGTGGAGCAGTGGCGTAtta > 2:572719/1‑139 (MQ=255) ttCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCa > 1:10244124/1‑140 (MQ=255) tCACATTTCGTGCAAATATTTCGCGAAGATAATTAAGAACTCA‑GGCC‑‑A‑AA‑AATAACCGGCTCAATGGACGGTTTACGTTGTTAATCAAGCTTTCAGACGAATTGATTAATTAGCAGCCTGTGGATCATTGTCGTATTCAg < 2:1951956/140‑1 (MQ=255) cacaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGc > 1:521771/1‑140 (MQ=255) cacaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGc > 1:5812072/1‑140 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCTAGGGCCGGTTTCCGTTGTTACTCAAGCTGTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:5949498/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:864576/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:5366846/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:841506/140‑1 (MQ=255) atgtCGGGCAAATAAGTCGCGACGATAATTCAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGcaca < 1:5619528/137‑1 (MQ=255) tttCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAg > 1:11053230/1‑140 (MQ=255) tCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGt < 1:9495832/140‑1 (MQ=255) cGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTc > 1:11353760/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 1:2892020/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 1:6740469/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 1:3935346/1‑140 (MQ=255) ataatTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAAc < 1:7399762/140‑1 (MQ=255) aatTCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCg < 2:8855848/140‑1 (MQ=255) ttCGCGAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGa < 2:3308889/140‑1 (MQ=255) cgAAGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTtg < 1:6899063/140‑1 (MQ=255) aaGATAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTtgat < 2:5021891/140‑1 (MQ=255) gaaaaTTAAGAACACA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAAGGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTtgatga < 2:7512873/137‑1 (MQ=255) aTAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGAc < 1:169730/140‑1 (MQ=255) aTAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGAc < 1:9117814/140‑1 (MQ=255) aTAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGAc < 2:3859446/140‑1 (MQ=255) aTAATTAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTAGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGAc < 1:7656599/140‑1 (MQ=255) tAAGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 1:9645830/140‑1 (MQ=255) aGAACTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCg < 1:4411622/140‑1 (MQ=255) aaCTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 1:1536782/140‑1 (MQ=255) aCTCA‑GGCCA‑A‑AA‑AA‑AACCGGCGCACTGGCCGGTGTCCGTTGTTCCTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAAGCGGAGTGGATGTCATGTCCGGTa > 2:9786117/1‑140 (MQ=255) a‑GGCCA‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatcat > 1:10839953/1‑140 (MQ=255) | GTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCA‑GGCC‑‑A‑AA‑AA‑AACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826538‑1826810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |