| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 247,295 | +G | intergenic (+4/‑171) | yafL → / → rayT | C40 family peptidase/REP‑associated tyrosine transposase RayT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 247,294 | 1 | . | G | 98.8% | 1430.1 / 6.9 | 417 | intergenic (+3/‑172) | yafL/rayT | C40 family peptidase/REP‑associated tyrosine transposase RayT |
| Reads supporting (aligned to +/- strand): ref base . (2/3); new base G (145/266); total (148/269) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 478 total aligned reads displayed.
TGTATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAAG‑AC‑GATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGCCAA > NZ_CP025268/247155‑247425 | tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑Ac > 2:6176000/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑Ac > 2:5577587/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑Ac > 1:4867850/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑Ac > 1:4148407/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑Ac > 1:3968987/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑Ac > 2:7896314/1‑140 (MQ=255)tgtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑Ac < 1:2928211/140‑1 (MQ=255) gtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCCTTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑AC‑g > 1:9099585/1‑140 (MQ=255) gtATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑AC‑g > 1:5150985/1‑140 (MQ=255) tttGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑AC‑ggat < 1:11414719/140‑4 (MQ=255) tGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑AC‑ggataa < 2:50256/140‑6 (MQ=255) tGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑AC‑ggataa < 2:5321446/140‑6 (MQ=255) gggCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACTATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAg > 1:6387533/1‑140 (MQ=255) gggCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGGGCGCGCAGGATTTTGACGGAAGAGACGAGTTTGTAGG‑ACGGATAAg > 2:4528651/1‑140 (MQ=255) gggCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAg > 1:7232265/1‑140 (MQ=255) gggCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAg > 1:4345307/1‑140 (MQ=255) gggCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGAGTTTGTAGG‑ACGGATAAg > 1:10077148/1‑140 (MQ=255) gggCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATGTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGAGTTTGTAGG‑AC‑ggagaag > 2:6605254/1‑134 (MQ=255) ggCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAgg < 1:7586964/140‑1 (MQ=255) cGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTGTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCg > 1:1634865/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGtt > 2:6344033/1‑140 (MQ=255) aTGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGtt > 2:10625492/1‑140 (MQ=255) tGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGttt > 1:1338882/1‑140 (MQ=255) gggCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTa > 2:7038492/1‑140 (MQ=255) gCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTAcg < 1:9646549/140‑1 (MQ=255) gCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTAcg < 1:669146/140‑1 (MQ=255) gCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTAcg < 1:7917906/140‑1 (MQ=255) aTTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTAcgccg > 2:1069776/1‑140 (MQ=255) ttATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCa < 1:7351849/140‑1 (MQ=255) ttATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCa < 2:4274027/140‑1 (MQ=255) ttATCGAGTCGCCACGTACAGGCGAAACGATTCGGATAAGCCGATTATCCGATCCTTTCTGGCATTAGCAATTGTTGGGCGCGCGCAGGATTTTTACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTAcgccgct < 2:7378601/140‑2 (MQ=255) aTCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATc < 1:4746014/140‑1 (MQ=255) aTCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATc > 1:3393406/1‑140 (MQ=255) cGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCg > 2:359240/1‑140 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCgg < 2:8859218/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCgg < 2:10972646/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATATTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCgg < 1:9425149/140‑1 (MQ=255) gAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCATTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCgg < 1:8664015/140‑1 (MQ=255) aGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGc > 2:5723943/1‑140 (MQ=255) aGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGc < 1:9979852/140‑1 (MQ=255) gcGCCACGACCCGGCGAACCCAGTCGGAAAAGCCGATTAGCCGAACCATTCTGGCAGGACCAATTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTAGCAGT‑ACGGATAAGGCGTTTTCGCCGCCTCCGGCAg < 2:8446745/139‑1 (MQ=255) cGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACTCCGCATCCGGCAGt > 2:5958927/1‑140 (MQ=255) gCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGtt > 1:242925/1‑140 (MQ=255) gCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGtt > 1:10388703/1‑140 (MQ=255) cACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGt < 2:2538703/140‑1 (MQ=255) aCGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTa < 1:4677516/140‑1 (MQ=255) cGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTAc < 1:699088/140‑1 (MQ=255) gcaCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCAATTTTTGGGCGCGCGCAGGTTTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGATGTACg < 2:10376744/138‑1 (MQ=38) gTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACg < 2:1748764/140‑1 (MQ=255) aCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCa < 1:6196663/140‑1 (MQ=255) aCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCa < 1:4213926/140‑1 (MQ=255) aCCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCa < 1:3172067/140‑1 (MQ=255) ccGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGtgcacca < 1:7996257/140‑7 (MQ=38) ccGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAg < 2:6853850/140‑1 (MQ=255) ccGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAg < 2:2112031/140‑1 (MQ=255) ccGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAg < 2:11183874/140‑1 (MQ=255) gCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTg > 2:8093240/1‑140 (MQ=255) gAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGcc < 1:6890418/140‑1 (MQ=255) gAAACCATTCGGATAAGCCGATGAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGcc < 1:3826573/140‑1 (MQ=255) aCCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGa > 2:9181693/1‑140 (MQ=255) cATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATg < 1:8870934/140‑1 (MQ=255) aTTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCAACCGGCAGTTGTACGCAGGTGCCTGATGc > 2:3738361/1‑140 (MQ=255) tCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGAGTTTGTAGG‑ACGGATAAGGCGTGTACGCCGCCTCCGGCCGTTGTACGCAGGTGCCTGAGGCGa > 1:10227422/1‑140 (MQ=255) ggATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACg < 1:6467951/140‑1 (MQ=255) ggATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACg < 1:2585621/140‑1 (MQ=255) gATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGc < 1:824088/140‑1 (MQ=255) tAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTg > 1:9789774/1‑140 (MQ=255) aaGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTgg < 1:8357348/140‑1 (MQ=255) aaGCCGAGTAGCCGATCCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGCCGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGGACGCAGGTGCCTGATGCGACGCTgg < 2:10311435/140‑1 (MQ=37) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCCTCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 1:3609486/140‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 2:291594/140‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 2:8701685/140‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 1:11142688/140‑1 (MQ=255) aGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 2:11330532/140‑1 (MQ=255) aGCCGAGTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGgc < 2:7595745/140‑1 (MQ=255) aGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTa < 2:3930967/140‑1 (MQ=255) aGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTa < 1:9901226/140‑1 (MQ=255) ccGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATc < 2:9404874/140‑1 (MQ=255) cgcaCCCTTCTGGCTGGACCATTTTTTGGGCGCGCGCAGGTTTTTGACGGAAGTGCCGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCAGCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCa < 1:1771124/137‑1 (MQ=18) gAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCAt > 1:9569345/1‑140 (MQ=255) ggACCAGTTTTTGCGCGCGCGCAGGATTTTGCCGGAAGAGACGATTGTGTCGG‑ACGGCTAACGCGTTCACGCCGCATCCGGCAGTTGTCCGCAGGGGCCTGATGCGCCGCTGGCGCGTCTGATCATGCCGCCGACCCcgc < 2:3662115/140‑1 (MQ=19) gACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCcgcg > 1:1888686/1‑140 (MQ=255) ccATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGaa < 1:5724601/140‑1 (MQ=255) ggCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAg < 2:11092451/140‑1 (MQ=255) ggCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAg < 1:10915219/140‑1 (MQ=255) ggCGCGCGCAGGATTTTGACGGAAGAGACGATGTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTCCGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAg < 2:7210266/140‑1 (MQ=25) gcgcgcgcAGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGc > 2:6492788/1‑140 (MQ=255) cgcAGGATTTTGACGGAAGAGACGATTTTGTAGGAAG‑GATAAGGCGTTTACGCCGAATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGAATTATCATGCCTAAGAGCCCGCGAATATTATCGAGCCGCtt > 2:4805981/1‑140 (MQ=25) aGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 1:5353975/140‑1 (MQ=255) aGGATTTTGACGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc < 2:5412693/140‑1 (MQ=255) tttGACGGAAGAGACGATTTTGTAGGTCC‑GATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGTCGCTTTCCCGata < 1:6068509/140‑1 (MQ=25) cGGAAGAGACGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATaaaa < 1:2180489/140‑1 (MQ=255) agagACGATTGTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAaacaac < 2:10829200/140‑1 (MQ=255) gagaCGATTTTGTAGG‑ACGGAGAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAAcc < 2:3263746/140‑1 (MQ=255) agaCGATTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGAATACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCt < 2:5063385/140‑1 (MQ=25) aTTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTg < 1:11045707/140‑1 (MQ=255) aTTTTGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTg < 1:10744663/140‑1 (MQ=255) ttttGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGc < 2:2344233/140‑1 (MQ=255) attGTAGG‑ACGGATAACTCGTTAACGCCGCATCCGGCAGCTGTCCGCAGGTGCCTGAAGCGACCCTGGCGCGTCTTATCAAGCCAACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAACCAACCTCAtgtcc < 2:1927034/139‑5 (MQ=255) tGTAGG‑ACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTcc > 2:1370317/1‑115 (MQ=255) | TGTATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAAG‑AC‑GATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACGAGCCCGCGAATATTTGCGAGCCGCTTTCCCGATATAAAACAACCTCATTGCCAA > NZ_CP025268/247155‑247425 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |