| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,773,671 | (C)5→6 | intergenic (+161/‑55) | yfjQ → / → yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,773,666 | 1 | . | C | 94.9% | 1996.4 / 93.2 | 625 | intergenic (+156/‑60) | yfjQ/yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (24/8); new base C (391/202); total (415/210) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 707 total aligned reads displayed.
CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑CC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGTGA > NZ_CP025268/2773527‑2773802 | ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCACTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑cc‑c‑c‑c < 2:8391090/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACNTCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑cc‑c‑c‑c < 1:6110811/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CT‑cc‑c‑c‑c < 1:702071/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑cc‑c‑c‑c < 1:9557655/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑cc‑c‑c‑c < 2:2410115/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑cc‑c‑c‑c < 2:669581/140‑1 (MQ=255) tctCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑cc‑c‑c‑cctct < 1:5281275/138‑5 (MQ=255) tatCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑cc‑c‑c‑cctct < 1:5907141/140‑5 (MQ=255) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTGTTTAAAg > 1:1076227/1‑140 (MQ=255) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCGTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTGTAAAg > 2:1244226/1‑140 (MQ=255) tGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATcaca < 1:648497/140‑1 (MQ=255) gTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCAcat < 2:4449560/140‑1 (MQ=255) tCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCGGG‑CC‑C‑C‑CTCTGTATAGTATTCTcatc > 1:429926/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAGTAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTGAGAGTAATCACATCAttt > 1:5537168/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCGTTTATCCCCCGTGACATCTGGCTTTTGCAGAAATAAAAACTAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGGATTCACATCGttt > 1:984304/1‑140 (MQ=255) aTCGCTATGTGCTCGTGTGCCTCAATCCCCCGGGTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑CC‑C‑CGCTCTTTAATGTAGTGACATGAtttt > 1:9160288/1‑140 (MQ=25) gCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAGATAATAAAGAGTTTCTGCGTTGTCCATACCCTGTC‑GGCCC‑C‑C‑CTGGTGTGAGTAAGCACATCATTTtcag > 1:4758367/1‑140 (MQ=255) tATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGGTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCGTTAAAGTAATCACATCAGTTtcagtc > 1:459465/1‑140 (MQ=255) gCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAAGCCCCGTTACATCTGGCTTTTGCAGAAATAAAAATTAGTTTCTGCGTTGTCCATTCGCTGTC‑CG‑CCGC‑C‑CTCGTTCTAGGGATCAGATCATTTTCGGTGAGTTa > 2:11177542/1‑140 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTAGAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:3354648/140‑1 (MQ=255) tCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CGCTTTAAAGTAATCACATCATTTTCAGTCAGTTatc > 1:3957589/1‑138 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTatgtt > 1:9058999/1‑136 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACtt > 1:8891745/1‑140 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACtt > 2:4622808/1‑140 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCCGTTAACttt > 1:8145277/1‑140 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CGCTTTAATGGAATCACATCATTTTCAGTCTGTTTACttt > 2:9482735/1‑140 (MQ=21) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTcc > 2:3623862/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGGCAGTTAACTTTCCTg > 2:5175653/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATAATTTTCAGTCAGTTAACTTTCCTg > 2:10052781/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CGCTTTATAGTAATCACATCATTTTGTGTCAGTTAACTTTCCTg > 2:409982/1‑140 (MQ=255) tCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CGCTTTAAAGTAATCACATCATTTTCAGTCAGTTTACTTTCCTGga > 2:7776667/1‑140 (MQ=255) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGaa < 2:1091369/140‑1 (MQ=255) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CACTGTAAAGTAATCACATCACTTTCAGTCAGTTAACTTTCCTGGAGaa < 2:7016077/140‑1 (MQ=18) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 1:4402437/140‑1 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTACAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 2:2202397/140‑1 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 1:8538598/140‑1 (MQ=255) gTTATAGCTTTTAACCCCCGTTACGTCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCAt < 1:3578831/140‑1 (MQ=255) taGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGaca < 1:1415098/140‑1 (MQ=255) aGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGacac < 1:9472789/140‑1 (MQ=255) ttttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAgg > 1:10076274/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTaaa < 1:4110289/82‑1 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 1:2211444/128‑1 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCa > 2:5575806/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑cc‑c‑c‑c > 1:1117692/1‑73 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTATAGTAATCACTTCATTTTCAGTCAGTTTACTTTCCTGGAGTATCTCTCATGACAGAGGCAg > 1:7361942/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAAACACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg < 1:11339101/140‑1 (MQ=255) cccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAc < 1:2254878/140‑1 (MQ=255) ccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcg < 1:7992264/140‑1 (MQ=255) ccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcg < 2:2105594/140‑1 (MQ=255) ccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCAGAAcgcc > 2:6298331/1‑140 (MQ=255) ccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgcc > 2:325675/1‑140 (MQ=255) ccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgcc > 2:11281368/1‑140 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg < 2:9014547/140‑1 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg > 1:10212264/1‑140 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg > 1:6878911/1‑140 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTGTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg < 2:5355208/140‑1 (MQ=255) ttACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACgccgcc > 2:3438179/1‑140 (MQ=255) ttACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTGAACTTTCCTGGAGACTCTCTCATGACACAGGCAGAACgccgcc > 2:1061853/1‑140 (MQ=255) tCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGAc > 1:1951062/1‑140 (MQ=255) cTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggct < 1:7559944/140‑1 (MQ=255) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 1:1777897/104‑1 (MQ=255) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctggct > 2:11359571/1‑140 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 1:10509965/140‑1 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 1:347101/140‑1 (MQ=255) aaTAAAAAATAGTTTCGGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTGTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 2:9710725/140‑1 (MQ=255) aaaaaTAGTTTCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCATTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 2:9186490/140‑1 (MQ=255) aaaaaTAGAGTCTGCGTTGTCCATACCCAGTC‑CGCCC‑C‑C‑CTCTATAAAGTAAACACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 2:8046345/140‑1 (MQ=14) tttCTGCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATa > 1:7123520/1‑140 (MQ=255) gCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCAt > 2:7256669/1‑83 (MQ=255) gCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAg < 2:7059203/140‑1 (MQ=255) gCGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAg < 1:2098692/140‑1 (MQ=255) cGTTGTCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGc < 2:4917877/140‑1 (MQ=255) tCCATACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCt > 2:1392551/1‑140 (MQ=255) tACCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTGAACGTTCCTGGCGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGtt < 2:687126/140‑1 (MQ=11) aCCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTg > 1:48903/1‑140 (MQ=255) aCCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTg > 1:2807880/1‑140 (MQ=255) aCCCTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTg > 2:4772540/1‑140 (MQ=255) cccTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGc < 1:7786322/140‑1 (MQ=255) cTGTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTGTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCgg < 2:3887589/140‑1 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAACGTGAACACCTCATTTTCAGTCCGGTCACTTTCCTGGAGAATCTCTCATGTCACAGGCAGAACGCCGCCATGACCGGCGGGCGGTCAGGCGGGCGCGGCTAATCAGCCGTCTGGTTGCgggg > 2:10832216/1‑139 (MQ=14) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTCATCACCTCATTTTCAGTCCGTTAACTGTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCAGGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt < 2:2655960/140‑1 (MQ=14) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTCATCACATCATTTTCAGTCAGTTAACTTTNCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:10635153/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:10991444/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8311699/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:865870/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:8871658/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1254679/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8680056/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:9712544/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5918819/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:2562339/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1454794/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3129593/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3718410/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:513266/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:6717225/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1818790/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGGTGCGGGt > 1:6209363/1‑140 (MQ=255) gTC‑CGCCC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGAGAATCAGCCGTCTGGTTGCGGGt > 2:4290062/1‑140 (MQ=255) gTC‑CG‑CC‑CGC‑CTCTTTAATGTATTCTCATCATTTTCAGTCTGTTAACTTTCCTGGAGTATCTCTCATGACACAGGCAGACCGCCGCCATGACCGGCTGGCTGTCAGGCTGTCCCTGATAAGCAGCCGTCTGGGGGCgggg > 2:10290867/1‑139 (MQ=14) | CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTC‑CG‑CC‑C‑C‑CTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGTGA > NZ_CP025268/2773527‑2773802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |