Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 3,743,290 +C intergenic (‑66/‑116) yiaJ ← / → galK IclR family transcriptional regulator YiaJ/galactokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252683,743,2891.C97.5% 924.7 / 14.5 275intergenic (‑65/‑117)yiaJ/galKIclR family transcriptional regulator YiaJ/galactokinase
Reads supporting (aligned to +/- strand):  ref base . (5/2);  new base C (153/114);  total (159/116)
Fisher's exact test for biased strand distribution p-value = 7.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 291 total aligned reads displayed.

CTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAAAAA  >  NZ_CP025268/3743151‑3743423
                                                                                                                                            |                                                                                                                                       
ctctGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAc                                                                                                                                        <  2:2102599/140‑1 (MQ=255)
ctctGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAc                                                                                                                                        <  1:8764494/140‑1 (MQ=255)
 tcgggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAcc                                                                                                                                       <  1:10161931/137‑2 (MQ=255)
     gCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAccaatt                                                                                                                                   <  2:2544872/140‑6 (MQ=255)
      cTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCTCTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTg                                                                                                                                  >  2:3858899/1‑140 (MQ=255)
      cTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTg                                                                                                                                  >  1:99638/1‑140 (MQ=255)
               ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATg                                                                                                                         <  1:5999265/140‑1 (MQ=255)
               ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATg                                                                                                                         >  2:304990/1‑140 (MQ=255)
               ggACGCTCTTTGTCCTGCGCCAACTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGGTCACGATCTCGACAGATAATTTATAACCAATTGCTTTTTATg                                                                                                                         <  2:9437568/140‑1 (MQ=255)
                      ctTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTg                                                                                                                  >  1:11072574/1‑140 (MQ=255)
                       tttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGa                                                                                                                 <  2:1842973/140‑1 (MQ=255)
                       tgtttCCGGCGCCCTCTGGTTCTCTTGTGTTCCCATCACTTCTTTCCCCATTTTGTCGCGGCCTGGTGGTAGCGCATGGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAGCAGTGGAGTTTTATGTCTTTTGa                                                                                                                 >  2:6010666/3‑140 (MQ=255)
                          ttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAAt                                                                                                              >  1:9751703/1‑140 (MQ=255)
                               gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatc                                                                                                         >  1:8844741/1‑140 (MQ=255)
                               gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCACAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatc                                                                                                         >  2:615947/1‑140 (MQ=255)
                                cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatca                                                                                                        <  1:4934986/140‑1 (MQ=255)
                                cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCAATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGAAAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATtcatca                                                                                                        <  2:3293075/140‑1 (MQ=255)
                                 tccATCTCGTTCTCATTTTTTCCCAACACTTCTTTCCACATAATGTCCCCTCCTGATTGTAGAGCAAAGTGTCCCGTAGTTCACGATCTCGACAGATAAATTATAACCAAATGAATTTTATGTCATTTGAAATACATCaa                                                                                                       <  2:6762670/139‑1 (MQ=255)
                                 gcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCaa                                                                                                       >  1:196895/1‑140 (MQ=255)
                                  ccATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAAt                                                                                                      <  1:4912242/140‑1 (MQ=255)
                                   cATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC                                                                                                     <  2:10549613‑M1/140‑1 (MQ=255)
                                     tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag                                                                                                   >  1:2472655‑M1/1‑138 (MQ=255)
                                     tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag                                                                                                   >  1:3905312‑M1/1‑138 (MQ=255)
                                     tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag                                                                                                   >  2:9643274‑M1/1‑138 (MQ=255)
                                          ttCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgc                                                                                              >  1:551681‑M1/1‑133 (MQ=255)
                                          ttCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgc                                                                                              >  1:1504847‑M1/1‑133 (MQ=255)
                                          ttCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgc                                                                                              >  1:3347268‑M1/1‑133 (MQ=255)
                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  1:1333000‑M1/140‑9 (MQ=255)
                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  2:2696213‑M1/140‑9 (MQ=255)
                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATGTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  2:8390483‑M1/140‑9 (MQ=255)
                                           tctcTTTTTTTCCCATCACTTCTTTCCCCATTGTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  2:10672660‑M1/140‑9 (MQ=255)
                                           tctcTTTATTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc                                                                                             <  2:7009141‑M1/140‑9 (MQ=255)
                                            ctctTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcct                                                                                            >  1:10432978‑M1/1‑131 (MQ=255)
                                            ctctTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcct                                                                                            <  1:10794603‑M1/140‑10 (MQ=255)
                                            ctctTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcct                                                                                            <  2:5250162‑M1/140‑10 (MQ=255)
                                             tctTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcctt                                                                                           >  1:11317779‑M1/1‑130 (MQ=255)
                                               tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt                                                                                         >  2:2584559‑M1/1‑128 (MQ=255)
                                                   tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa                                                                                     <  2:3060924‑M1/140‑17 (MQ=255)
                                                   gttcCCACCACTTCGTTCCCCCTTTTGTCGCGGCCTGATGGTAGCGCATAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAAGTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa                                                                                     <  2:7462968‑M1/139‑17 (MQ=255)
                                                     tCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaa                                                                                   <  1:326637‑M1/140‑19 (MQ=255)
                                                      cccATCACTTCTTTCCCCAATTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGGAGTTCACGAACTCGACAGATAATTTATAACCAATTGAATTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaag                                                                                  <  2:1930749‑M1/140‑20 (MQ=255)
                                                         aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtga                                                                               >  2:3563513‑M1/1‑118 (MQ=255)
                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  1:7814598‑M1/140‑24 (MQ=255)
                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  1:8086442‑M1/140‑24 (MQ=255)
                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  2:2203121‑M1/140‑24 (MQ=255)
                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  2:167709‑M1/140‑24 (MQ=255)
                                                          tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  2:4458759‑M1/140‑24 (MQ=255)
                                                              ttcttTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgat                                                                          <  2:4319363‑M1/140‑28 (MQ=255)
                                                                   tCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTAATAACCAATTGATTTGTATGTCTTTTGAAAGTCATCAATCagattgccttgttaaaaagtgatcgagatatg                                                                     >  2:8658336‑M1/1‑108 (MQ=255)
                                                                     cccATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg                                                                   <  1:7995230‑M1/140‑35 (MQ=255)
                                                                     cccATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTAGGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg                                                                   <  2:1358452‑M1/140‑35 (MQ=255)
                                                                      ccATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatatga                                                                  >  2:11048167‑M1/1‑105 (MQ=255)
                                                                        aTTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaa                                                                >  2:4059466‑M1/1‑103 (MQ=255)
                                                                          tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc                                                              >  2:10336781‑M1/1‑101 (MQ=255)
                                                                          tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc                                                              >  2:7760249‑M1/1‑101 (MQ=255)
                                                                                   tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc                                                     >  1:9270177‑M1/1‑92 (MQ=255)
                                                                                    ccTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgca                                                    <  2:1250656‑M1/140‑50 (MQ=255)
                                                                                          ggTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAAACAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattga                                              <  2:11304776‑M1/140‑56 (MQ=255)
                                                                                             aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACTGATAATTTATAACAAATTGCTGTTTATGTGTTTTGAAATTCTTCACTCagattgccttgttaaaaagtgatcgatatatttgaaatctagtttcgcagagtgaaat                                           >  2:11472603‑M1/1‑82 (MQ=255)
                                                                                              gcgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatt                                          >  2:7273412‑M1/1‑81 (MQ=255)
                                                                                              gcgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagaatgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatt                                          >  2:8478693‑M1/1‑81 (MQ=255)
                                                                                               cgcAAAGTGTGCCGTAGTTCACGATCTCGCCAGATAATTTATAACCAAGTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatctatttgaaatcaagtttcgcatattgaaattt                                         >  2:4569034‑M1/1‑80 (MQ=255)
                                                                                                      tgtgCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagcca                                  >  2:3467650‑M1/1‑73 (MQ=255)
                                                                                                      tgtgCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATGTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagcca                                  >  1:739144‑M1/1‑73 (MQ=255)
                                                                                                       gtgCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAATTTCATCAATCagattgcgttgtgaaaaagtgatcgatagatttgaactcaagtttcgcagattgacattttaagccat                                 >  2:4207534‑M1/1‑72 (MQ=255)
                                                                                                        tgCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa                                >  1:4103584‑M1/1‑71 (MQ=255)
                                                                                                         gCCGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaa                               >  1:3411915‑M1/1‑70 (MQ=255)
                                                                                                          ccGTAGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaa                              >  1:8587788‑M1/1‑69 (MQ=255)
                                                                                                              aGTTCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg                          <  2:6093148‑M1/140‑76 (MQ=255)
                                                                                                              aGTACACGATCTCGACAGATAATTAAGAACCAATTGAATTTCAGGTCTTTTTAAATTCATCAATCagattgccttgttaaaaagtgatcgatatacttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg                          <  2:6586060‑M1/140‑76 (MQ=255)
                                                                                                                ttCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCaa                                                                                                       <  2:8822601/61‑1 (MQ=255)
                                                                                                                ttCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                        >  1:7045056‑M1/1‑63 (MQ=255)
                                                                                                                ttCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat                        >  1:4252159‑M1/1‑63 (MQ=255)
                                                                                                                ttCACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgag                        >  2:5053529‑M1/1‑63 (MQ=255)
                                                                                                                  cACGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatca                      >  2:8995423‑M1/1‑61 (MQ=255)
                                                                                                                    cGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaa                    >  1:10230212‑M1/1‑59 (MQ=255)
                                                                                                                    cGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaa                    >  1:7298226‑M1/1‑59 (MQ=255)
                                                                                                                    cGATCTCGACAGATAATTTATAACCAATTGATTTTTATGTCTGTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatgtttgaaatcaagtttcgcatattgaaattttaagccaaaatagcgatcaaa                    >  1:1759914‑M1/1‑59 (MQ=255)
                                                                                                                       tctcTACAGATAATTTATAACCAATTGATTTTAATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaa                 <  2:11242306‑M1/140‑85 (MQ=255)
                                                                                                                       tctcGACAGATAATTTATAACCAATTGATTTTTCTGTCTTATGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaa                 <  1:9592297‑M1/140‑85 (MQ=255)
                                                                                                                       tctcGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaa                 >  1:3122224‑M1/1‑56 (MQ=255)
                                                                                                                        ctcGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat                                                                              <  1:6480363‑M1/78‑24 (MQ=255)
                                                                                                                         tcGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaac               >  1:4436515‑M1/1‑54 (MQ=255)
                                                                                                                          cGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaatatgtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca              >  1:4996737‑M1/1‑53 (MQ=255)
                                                                                                                          cGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttattccaaaatagcgatcaaaaaaaca              >  2:7127861‑M1/1‑53 (MQ=255)
                                                                                                                          cGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca              >  2:2427675‑M1/1‑53 (MQ=255)
                                                                                                                          cGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca              >  1:9320764‑M1/1‑53 (MQ=255)
                                                                                                                          cGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaaa              >  2:10396629‑M1/1‑53 (MQ=255)
                                                                                                                          cGACAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaa                                                                                   <  2:1397821‑M1/71‑19 (MQ=255)
                                                                                                                            aCAGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaag            >  1:288206‑M1/1‑51 (MQ=255)
                                                                                                                              aGATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaagga          <  1:2490138‑M1/140‑92 (MQ=255)
                                                                                                                               gATAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaataacaaggaa         >  2:8063774‑M1/1‑48 (MQ=255)
                                                                                                                                aTAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaag        >  2:6326561‑M1/1‑47 (MQ=255)
                                                                                                                                 tAATTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgtaattttaagccaaaaaagcgatcaaaaaaacaaggaagc       >  1:5306450‑M1/1‑46 (MQ=255)
                                                                                                                                  aaTTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcattttgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcc      <  1:6141101‑M1/140‑96 (MQ=255)
                                                                                                                                  aaTTTATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcc      <  1:6235‑M1/140‑96 (MQ=255)
                                                                                                                                     ttATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcctgg   >  1:6593690‑M1/1‑42 (MQ=255)
                                                                                                                                     ttATAACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcctgg   >  1:2284462‑M1/1‑42 (MQ=255)
                                                                                                                                      tataACCAATTGATTTTTCTGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaacaacaaggaagcctggg  <  2:1987300‑M1/140‑100 (MQ=255)
                                                                                                                                      tataACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcctggg  <  2:288206‑M1/140‑100 (MQ=255)
                                                                                                                                            |                                                                                                                                       
CTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATAACAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAAAAA  >  NZ_CP025268/3743151‑3743423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: