| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 6 (0.010) | 590 (0.900) +GCC |
138/268 | 0.2 | 99.0% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 6 (0.010) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 629 total aligned reads displayed.
GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑C‑CATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3864307‑3864444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG > NZ_CP025268/3864445‑3864583 ||| GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTG < 2:4291427/140‑1GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTG < 2:2069457/140‑1 GTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCC < 2:7759930/140‑1 GTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCC > 2:3167772/1‑140 GTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCC > 1:3524727/1‑140 TGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CCTGTTGCCC > 2:7982678/1‑140 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCAC < 1:6642896/140‑1 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCAC < 1:10355983/140‑1 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCAC < 1:9975678/140‑1 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCAC > 1:2468445/1‑140 GAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCA < 1:3645163/140‑1 AACCACGTAGTACAGCAGGGTTAAGCACAACCCATTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACAC < 2:3981631/140‑1 AACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACAC < 1:1657026/140‑1 ACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACC > 1:10011529/1‑140 CCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCA < 1:2599889/140‑1 CCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCA < 2:8185442/140‑1 CCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCA < 2:3835566/140‑1 CACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAA > 2:16189/1‑140 ACGAAGTACAGCAGGGTAAAGCACAACCCAATTGCGATTTGGTTCAGCATCATTTCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAATCCTAGTCAATCAGACCTCCG‑CACATGTTGCCCACCACACCAAA < 2:8787635/140‑1 ACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAA < 1:2673017/140‑1 ACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAA < 2:6102425/140‑1 CGAAGTACAGCAGGGTAAAGCACAACCCACTGGCGATTTGGGTCAGCATCATATCCGCGTGGGTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAG < 2:2600744/140‑1 CGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAG > 2:2390050/1‑140 cAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAG < 1:7888610/139‑1 AGTACAGCAGGGTAAAGCACAACCCCATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGA < 2:10814431/140‑1 AGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGA < 2:7850676/140‑1 AGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGA < 1:9838262/140‑1 TACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCTTCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATA < 1:7119895/140‑1 CAGCAGGGTAAAGCACAACCCACTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTAGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACA < 2:853696/140‑1 AGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACAT > 1:1299259/1‑140 GGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGG > 1:11059867/1‑140 GTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGT < 1:8381510/140‑1 GTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGT < 1:897955/140‑1 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCCAAGAGATACATTACGGTC > 2:11309442/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACTGTC > 2:2172475/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 1:4850817/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 1:802095/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 1:1592222/1‑140 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGA > 1:3814180/1‑140 ACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAG < 1:5795109/140‑1 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACC > 1:2238766/1‑106 CAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCC < 1:8537642/140‑1 AATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCG > 2:1108475/1‑140 AATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCACCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCG < 2:483106/140‑1 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 1:722111/1‑140 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 1:1888197/1‑140 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 2:10319632/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:4731946/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:4340524/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC > 2:9168986/1‑140 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:7563421/140‑1 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 1:8712715/1‑140 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 2:6871387/1‑140 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 1:7452353/1‑140 TTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACG > 1:5527015/1‑140 TTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACG < 1:4553464/140‑1 TGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGC < 2:5851490/140‑1 AGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTAC > 2:3439650/1‑140 CCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGC < 2:536695/140‑1 GCGTGGTTGCTGAACATCGGGCTCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 2:6347418/1‑140 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA < 1:9909801/140‑1 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 1:6270564/1‑140 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACAGTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 2:7195393/1‑140 CGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAAC > 1:11410468/1‑140 TGCTGATCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAA < 2:1862696/140‑1 TGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAA > 1:2051808/1‑140 TGCTGAACATCGGGATACAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGAGACATTACGGTCTACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAA < 2:5240666/140‑1 GCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAA > 1:10465558/1‑140 TCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCACAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGG < 2:5036004/140‑1 TCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGG > 1:8272580/1‑140 TCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGG > 2:6566361/1‑140 TCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGG < 1:10829886/140‑1 CGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGACATGAACAGGA > 2:9525206/1‑140 GATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCTCGGCGTGTACCGCAAACAGCTACGGTGAAATGAACAGGAAGG > 2:10618319/1‑140 GATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGG < 2:11479694/140‑1 TCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTA < 1:9173833/140‑1 TCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGAGTACCGCACACAGCAACGGTGAAATGAACAGGAAGGTc > 1:6868903/1‑139 AGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAAT > 1:6545468/1‑140 GTTTTGCGGTAAAACCTAGTCAATCAGTCCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT > 2:5545576/1‑140 TTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCA < 2:3612573/140‑1 TGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAG < 2:9776557/140‑1 TGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAG < 1:3303323/140‑1 TGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAG < 1:5233542/140‑1 TGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGACCACCACACCAAAGAGATACATTAGGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAG > 2:1380411/1‑140 TGCGGTAAAACCTAGTAAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACTTTACGGTCGTCATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCTACGGTGAAATGAACAGGAAGGTAAATTCCAG < 1:4121418/140‑1 CGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCG > 1:9569735/1‑140 CGGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCG > 1:6426013/1‑140 GGTAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG < 1:5057839/140‑1 TAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTT < 2:2793538/140‑1 TAAAACCTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACAGTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTT < 1:10137264/140‑1 ccTAGTCAATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTA < 1:10728108/138‑1 TAGTCAATCAGACCTCCGCC‑CCTGTTGCCCACCACACCAAAGAGATACATTCCGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAct > 2:4640366/1‑138 ATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCAC < 2:7630186/140‑1 ATCAGACCTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCAC < 1:2529241/140‑1 cGACCTCCGCC‑CATGGTGCCCACCACACCACAGAGATCCATTACGGTCGACAGTGATGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAACTGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAG < 2:2913143/139‑1 CTCCGCC‑CATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCTCCAGCATG > 2:4445859/1‑140 GTTGCCCACCACACCAAAGAGATACATTNCGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACTGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGG < 1:6083168/140‑1 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTG > 1:3239266/1‑140 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTG < 2:6021802/140‑1 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGACAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGTTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTG > 1:3024511/1‑140 ||| GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑C‑CATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3864307‑3864444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG > NZ_CP025268/3864445‑3864583 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |