BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	66565 =	229 (0.340)	166 (0.260) +TTCAAC	42/262	6.5	28.0%	intergenic (‑14/+101)	araD/araA	L‑ribulose‑5‑phosphate 4‑epimerase/L‑arabinose isomerase
*	?	NZ_CP025268	= 2435047	663 (0.990)	166 (0.260) +TTCAAC	42/262	6.5	28.0%	intergenic (‑249/+10)	cvpA/dedD	colicin V production protein/cell division protein DedD
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 668 total aligned reads displayed.

GAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCAC  >  NZ_CP025268/2434908‑2435185

gAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGc                                                                                                                                            <  2:2221141/140‑1 (MQ=255)

 aaaaaaTATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCa                                                                                                                                           >  1:3420915/1‑140 (MQ=255)

  aaaaaTATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCaa                                                                                                                                          <  2:1817881/140‑1 (MQ=255)

     aaTATTCCACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAc                                                                                                                                       <  1:6414432/140‑1 (MQ=255)

     aaTATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGAGGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAc                                                                                                                                       <  1:2717279/140‑1 (MQ=255)

        atTCAACGCCATCGAGTTTTTATGCCTTTGCGGCATCTGGCAATGCGTGTCGGATGCGGCGTAAACGCCTGATCCGACCTAC‑GGTTCTACCCCGGCGTAGGCCTGTTAAGACGCGCCAGCGTCGCATCAGGCACGCCCGt                                                                                                                                    >  2:3257831/1‑140 (MQ=37)

           cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTAtt                                                                                                                                 >  1:5014602/1‑140 (MQ=255)

           cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTAtt                                                                                                                                 >  1:3877330/1‑140 (MQ=255)

             aCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTaa                                                                                                                               >  1:2653159/1‑140 (MQ=255)

              cGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAAt                                                                                                                              >  2:2375788/1‑140 (MQ=255)

                ccATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGCCGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTc                                                                                                                            <  1:10568162/140‑1 (MQ=255)

                 cATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTACACGCCGTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCGGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTACTTCg                                                                                                                           <  2:8068471/140‑1 (MQ=255)

                 cATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCg                                                                                                                           <  1:10005443/140‑1 (MQ=255)

                 cATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCg                                                                                                                           <  2:10542236/140‑1 (MQ=255)

                 cATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCg                                                                                                                           <  1:5939902/140‑1 (MQ=255)

                    cGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCg                                                                                                                        >  2:1179427/1‑140 (MQ=255)

                      aCTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                                                      <  2:7511856/140‑1 (MQ=255)

                      aCTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                                                      <  2:2647467/140‑1 (MQ=255)

                      aCTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                                                      <  1:7495933/140‑1 (MQ=255)

                      aCTTTTTATGCCTGTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                                                      <  2:5485252/140‑1 (MQ=255)

                      aCTTTTTATGCCATTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                                                      <  1:9385078/140‑1 (MQ=255)

                      aCTTTTTAGGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTCTCCGACCTCC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                                                      <  2:2097364/140‑1 (MQ=255)

                       cTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGGTTCGACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                                                      <  2:7012017/140‑1 (MQ=255)

                         ttttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAg                                                                                                                   <  1:1754954/140‑1 (MQ=255)

                          tttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGc                                                                                                                  >  2:6852812/1‑140 (MQ=255)

                           ttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGcc                                                                                                                 <  1:4647260/140‑1 (MQ=255)

                           ttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGcc                                                                                                                 <  1:2306446/140‑1 (MQ=255)

                            tATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGccc                                                                                                                <  1:2946124/140‑1 (MQ=255)

                              tGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCAt                                                                                                              <  1:6650582/140‑1 (MQ=255)

                                   ttGCGGAATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCa                                                                                                         >  1:4215954/1‑140 (MQ=255)

                                    tGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCAc                                                                                                        >  1:6158875/1‑140 (MQ=255)

                                     gCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTCTCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGCCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                                                                                                       <  2:1354022/140‑1 (MQ=255)

                                     gCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCTTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                                                                                                       <  1:743808/140‑1 (MQ=255)

                                     gCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                                                                                                       <  2:8457363/140‑1 (MQ=255)

                                     gCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                                                                                                       <  2:952468/140‑1 (MQ=255)

                                     gCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                                                                                                       <  1:511730/140‑1 (MQ=255)

                                           tCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                                                      <  1:9547252/119‑1 (MQ=255)

                                           tCGGGCAATGCGTGTCGGATGCGGCGGAATCGCCTGAGCCGACCTAC‑GGGTCGACCCCTGCGGAGGCCGGATAAGCCGGGCCCGCGGCGCATCCGGCCAGACCGTATGATGTCGGCGGAGAGCCCCGTCCCCCGCCAcgt                                                                                                 >  2:4616100/1‑138 (MQ=255)

                                              ggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                                                                                              >  1:5446557/1‑140 (MQ=255)

                                              ggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                                                                                              >  2:5770030/1‑140 (MQ=255)

                                                     cGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGaaa                                                                                       <  1:1138810/140‑1 (MQ=255)

                                                     cGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTAACCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGAAAGACCGTATTAATTCGGCGTATAGCCCATTACACCGCCACTTAAGCCAGaaa                                                                                       >  1:10195137/1‑140 (MQ=255)

                                                       tgtCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCGGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTCCCACGCCACTTAAGCCAGAAAGt                                                                                     >  2:11089478/1‑140 (MQ=255)

                                                        gtCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAAtt                                                                                                                             >  2:1701191/1‑99 (MQ=255)

                                                                   cgTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCa                                                                         >  2:9640139/1‑140 (MQ=255)

                                                                   cgTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCa                                                                         <  1:9961905/140‑1 (MQ=255)

                                                                       aaCGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCa                                                                     >  1:8146655/1‑140 (MQ=255)

                                                                       aaCGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCa                                                                     <  1:10884432/140‑1 (MQ=255)

                                                                          gCCTTAGCCGACCGCC‑GGCGCTACCCCTGCGTAGGCCTGATACGACGCGCCAGCGTCGCAACAGGCAAGACCGTCTGAAGTCGGCGTATAGCCCATTACCACGCCCCTTCAGCCAGAACGTTGCTGCAACTCACCCAGCg                                                                  <  2:7676934/140‑1 (MQ=255)

                                                                            cTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGaa                                                                <  1:4400405/140‑1 (MQ=255)

                                                                             ttATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAAc                                                               >  1:2103204/1‑140 (MQ=255)

                                                                             ttATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAAc                                                               >  2:7155173/1‑140 (MQ=255)

                                                                                 ccGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCttt                                                           <  2:7411221/140‑1 (MQ=255)

                                                                                    aCCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGACCCTTTCAg                                                        >  1:6993177/1‑140 (MQ=255)

                                                                                    aCCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAg                                                        >  1:6538184/1‑140 (MQ=255)

                                                                                      cTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATGACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCCGCGAACCTTTCAGCt                                                      <  2:4945389/140‑1 (MQ=255)

                                                                                         c‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTAt                                                   <  1:7313052/140‑1 (MQ=255)

                                                                                         c‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTAt                                                   >  2:9200105/1‑140 (MQ=255)

                                                                                           ggTTCTCCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATc                                                  <  2:8692543/140‑1 (MQ=255)

                                                                                           ggTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATc                                                  <  2:10610304/140‑1 (MQ=255)

                                                                                               cTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTc                                              >  1:8448676/1‑140 (MQ=255)

                                                                                               cTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTc                                              >  1:9294422/1‑140 (MQ=255)

                                                                                                tACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCg                                             >  2:3944382/1‑140 (MQ=255)

                                                                                                tACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCg                                             >  2:1532333/1‑140 (MQ=255)

                                                                                                 aCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGa                                            <  1:1425015/140‑1 (MQ=255)

                                                                                                 aCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGa                                            <  1:8299431/140‑1 (MQ=255)

                                                                                                 aCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGa                                            <  1:4745368/140‑1 (MQ=255)

                                                                                                      tGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCAt                                       <  2:9388708/140‑1 (MQ=255)

                                                                                                      tGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAAGTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCAt                                       <  2:10373522/140‑1 (MQ=255)

                                                                                                      agCGAAGGCCTGATAAGACGCGCCCGCGTCGCCTCAGGCAAGACCGGATTAATTCGGCGTATAGCCCATGACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTAACTTTCGCGGCAt                                       <  2:7829950/139‑1 (MQ=255)

                                                                                                       gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCTTATAGCCCAGTACCACGCCTCTTAAGCCAGAAAGTTGCTGCAACTCACCCAGCGAACCTTTCAGCTGATCTTTCGAGGCATc                                      >  1:978983/1‑140 (MQ=39)

                                                                                                       gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATc                                      >  1:10709638/1‑140 (MQ=255)

                                                                                                       gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATc                                      >  1:5834171/1‑140 (MQ=255)

                                                                                                       gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATc                                      >  1:7786102/1‑140 (MQ=255)

                                                                                                       gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATc                                      >  1:1621468/1‑140 (MQ=255)

                                                                                                       gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTGATCTTTCGAGGCATc                                      >  2:4162562/1‑140 (MQ=255)

                                                                                                        cGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATcc                                     >  2:5859122/1‑140 (MQ=255)

                                                                                                           aGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGc                                  <  1:5640387/140‑1 (MQ=255)

                                                                                                             gCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGccc                                <  1:3741765/140‑1 (MQ=255)

                                                                                                                tGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAAc                             <  1:7710135/140‑1 (MQ=255)

                                                                                                                tGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAAc                             <  1:6884679/140‑1 (MQ=255)

                                                                                                                    aaGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGa                         <  2:10023490/140‑1 (MQ=255)

                                                                                                                       aCGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATa                      >  2:3601341/1‑140 (MQ=255)

                                                                                                                        cgcgCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATAc                     >  1:8921722/1‑140 (MQ=255)

                                                                                                                           gcCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACggg                  <  2:4384948/140‑1 (MQ=255)

                                                                                                                                   cGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGACTACGGGTAATTTTa          <  2:5012842/140‑1 (MQ=255)

                                                                                                                                   cGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTa          <  1:11142534/140‑1 (MQ=255)

                                                                                                                                     cATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTAcc        <  2:6437752/140‑1 (MQ=255)

                                                                                                                                     cATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTAcc        <  2:2752066/140‑1 (MQ=255)

                                                                                                                                       tCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCTGCTTATCTTTCGTGGCATCCGGCCCATGCAGAATACGGGTAATTTTACCCt      >  2:10805004/1‑140 (MQ=255)

                                                                                                                                        cAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTg     <  1:11435317/140‑1 (MQ=255)

                                                                                                                                          ggCATGACCGTATTAATTCGGAGTATAGACCATTACCAAGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCa   <  1:3239277/140‑1 (MQ=255)

                                                                                                                                          ggCAAGACCGTATTAATTCGGCGTATAGCGCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGTACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATAGGGGTAATTTTACCCTGCa   <  2:821117/140‑1 (MQ=255)

                                                                                                                                          ggCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGACAGTTGCTTCAACTCACACAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGTGTAATTTTACCCTGct   <  2:900002/140‑2 (MQ=255)

                                                                                                                                          ggCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCa   <  1:3500430/140‑1 (MQ=255)

                                                                                                                                          ggCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCa   <  1:5304974/140‑1 (MQ=255)

                                                                                                                                          ggCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCa   <  1:1179509/140‑1 (MQ=255)

                                                                                                                                          ggCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCa   <  2:6279061/140‑1 (MQ=255)

                                                                                                                                          ggCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCa   >  1:254145/1‑140 (MQ=255)

                                                                                                                                          ggCAAGACCGTATTAATTCGGCGTAGAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCa   <  2:1573724/140‑1 (MQ=255)

GAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑GGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCAC  >  NZ_CP025268/2434908‑2435185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.