| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,013,596 | T→C | pseudogene (539/542 nt) *370* (TAA→TAG) |
zapC → ycbX ← |
cell division protein ZapC 6‑N‑hydroxylaminopurine resistance protein YcbX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,013,596 | 0 | T | C | 100.0% | 1970.6 / NA | 563 | pseudogene (539/542 nt) *370* (TAA→TAG) | zapC ycbX | cell division protein ZapC 6‑N‑hydroxylaminopurine resistance protein YcbX |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (323/240); total (323/240) | |||||||||||
Only 100 of 563 total aligned reads displayed.
CCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TT‑GGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCCG > NZ_CP025268/1013461‑1013732 | cGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAAc < 2:6941091/140‑1 (MQ=255) cGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATGGCGTGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCATCAGCCTCGAACAGGCAGACTAAc > 1:6538775/1‑140 (MQ=255) tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTACCGCGcc < 1:74413/140‑1 (MQ=255) tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc < 2:5553596/140‑1 (MQ=255) tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc < 1:10615603/140‑1 (MQ=255) tATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGcc < 1:7638442/140‑1 (MQ=255) tGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACTGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCaa > 2:2423986/1‑140 (MQ=255) tGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCaa > 1:1764447/1‑140 (MQ=255) tGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCaa > 1:8687823/1‑140 (MQ=255) tGCCTGCTGGCACAACCCTGCGTGGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCaa > 1:160863/1‑140 (MQ=255) gctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTaa > 2:5162794/1‑140 (MQ=255) gctgGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTaa > 1:5498152/1‑140 (MQ=255) ggCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTg < 2:707300/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa < 1:3737978/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa < 2:4384910/140‑1 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCa > 1:10854282/1‑140 (MQ=255) cacaACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATCTTGACAGCTTCAGCCTAGAACAGGCAGTCTATATCTCCAACTTAAGTGCa > 2:6153247/1‑140 (MQ=255) caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt < 1:11317004/140‑1 (MQ=255) caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt < 2:1871953/140‑1 (MQ=255) caACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGt < 1:5064451/140‑1 (MQ=255) aaCCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTc < 1:3923291/140‑1 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGACCGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTGAAGTGCAGTCtt < 2:6762574/140‑1 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt > 2:10785257/1‑140 (MQ=255) cccTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt < 1:8275736/140‑1 (MQ=255) gCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGt > 1:4612428/1‑140 (MQ=255) gCGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGt > 1:9368908/1‑140 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa > 1:8080142/1‑140 (MQ=255) cGTTGTTATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTa > 2:8656954/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGGTGGTTAATGTTGTCAGCTTCGGCCTCGATCAGGCAGTCTGACGCGCCAACTGTAGGGCAGTCTTCGGTACTCAg > 2:10995384/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGGAGGTTAGTGTTGACAGATTCAGCCTCGAACAGGCAGTCTAACGCGGCATCTGAAGTGCGGTCTTCGGTACACAg > 2:11238836/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg < 1:4299221/140‑1 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:9866251/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 2:3225745/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:2603786/1‑140 (MQ=255) ttATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAg > 1:10141692/1‑140 (MQ=255) tATTGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGc < 1:1970792/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTACAATCATGAACGCCAGGCGGAAACCGCAGGTGAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCGACCGCGCCACCTTAAGTGCAGTCTTCGGTACACAGCTa < 2:1939750/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 2:5652432/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 2:8532443/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 1:5697089/140‑1 (MQ=255) ttGCGGGTCGCGCGATGCAG‑TTGGGCGACGCAATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTa < 1:5566187/140‑1 (MQ=255) gCGGGTCGCGCGATGCAGTTT‑GGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTTCAGTCTTCGGTACACAGCTACa < 2:7855598/140‑1 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAACCCGCAGGTTAATGTTGACAGCTTCAGCCTCGATCAGGCAGTCTAACGCGCCCACTTACGTGCAGTCTTCGGTACTCAGCTACa > 2:8405983/1‑140 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa < 1:6971982/140‑1 (MQ=255) gCGGGTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCATCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACa > 2:8038031/1‑140 (MQ=255) ggTCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa > 1:7249745/1‑140 (MQ=255) tCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCaaa > 1:1394096/1‑140 (MQ=255) tCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCaaa > 1:925929/1‑140 (MQ=255) tCGCGCGATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCaaa > 1:2331953/1‑140 (MQ=255) gcgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGa < 1:5991/140‑1 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa < 2:1461479/140‑1 (MQ=255) cgcgATGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGaa > 1:9496572/1‑140 (MQ=255) tGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTg > 1:240251/1‑140 (MQ=255) tGCAG‑TTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGATTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTg < 2:1191981/140‑1 (MQ=255) ttgggCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatc > 1:8939739/4‑140 (MQ=255) tgggCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCcatca < 1:8441988/138‑1 (MQ=255) ggCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCatcatc > 2:2162884/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 1:11477622/1‑140 (MQ=255) cGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGc > 2:3635303/1‑140 (MQ=255) gACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGcc < 2:500634/140‑1 (MQ=255) cGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCa > 2:3382560/1‑140 (MQ=255) ccATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCAtt > 2:7294284/1‑140 (MQ=255) cATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACGTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTg < 2:5803914/140‑1 (MQ=255) aaaTCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAt < 2:820566/140‑1 (MQ=255) gAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCGTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCa > 2:1568341/1‑140 (MQ=255) gAACGACAGGCTGAAACCGCAGGTTAATGTTGAAATCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGAttttttaa > 2:2924279/1‑138 (MQ=255) caCGACAGGCAGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAg < 2:6489207/139‑1 (MQ=255) cAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAgcggcg > 2:5387144/1‑140 (MQ=255) aGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGt > 2:4198567/1‑140 (MQ=255) ggCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTg > 1:10242590/1‑140 (MQ=255) gCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGa > 1:5325510/1‑140 (MQ=255) aaCCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCtt > 2:10647275/1‑70 (MQ=255) aCCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGc < 1:6190040/140‑1 (MQ=255) aCCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGc < 1:7550414/140‑1 (MQ=255) cAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTc > 2:9710675/1‑140 (MQ=255) aGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCt < 1:5419487/140‑1 (MQ=255) gTTAATGTTGACAGCTTCAGCCTCTAACTGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTaa < 2:2602770/140‑1 (MQ=255) gTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTaa < 1:7931369/140‑1 (MQ=255) tGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCt > 1:11034664/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCa > 1:1263369/1‑70 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 2:100998/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:4924013/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:4772015/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:4403419/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:7821989/1‑140 (MQ=255) aCAGCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAaca > 1:2859235/1‑140 (MQ=255) gCTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACgg < 1:6599566/140‑1 (MQ=255) cTTCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGc > 2:4739849/1‑140 (MQ=255) ttCAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCa < 2:1316387/140‑1 (MQ=255) cAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAAc > 1:5833655/1‑140 (MQ=255) cAGCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAAc > 2:7464608/1‑140 (MQ=255) tccTCGAACTTGCAGTCTAACGCGCCTACTTAAGTGCAGTCTTCTGTACACAGCTACAGCAAAGAATTGTTCCATCATCTCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAATGCTGAACACGGCAACtt < 1:4095588/139‑1 (MQ=255) gCCTCGAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACtt < 1:6391373/140‑1 (MQ=255) cTCGAAAAGGCAGTCTAACTCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTcc > 2:9369197/1‑140 (MQ=255) gAACAGGCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCcaca > 1:3057094/1‑140 (MQ=255) aaCCGGCAGTCTAACGCGCCCACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTGCAGCGGCGTGCCTTCGCCTTCTAAAAGCGGAACACGGCAACGTCCACaa > 2:4009870/1‑140 (MQ=255) gCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTCCACAGCTACAGCAAAGAATGGTGCCATCATCGCCCAATGCTGATTTTTTCAGCGGCGTGACTTCGCCGACTCAAAGCTGAACACGGCAACTTCCACACATGcc > 2:9221258/1‑140 (MQ=255) gCAGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGcc > 1:10490266/1‑140 (MQ=255) aGTCTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGTCATCTTCCACAAATGCCcg < 1:3458927/140‑1 (MQ=255) aGTCTAACGCGCCAACGTAAGTGCAGTCGTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCGTGGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCGAAAAGCTGAACACGGCAACTTCCACACATGCCcg > 2:3806362/1‑140 (MQ=255) | CCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAG‑TT‑GGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAACGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAGCGGCGTGACTTCGCCTTCTAAAAGCTGAACACGGCAACTTCCACAAATGCCCG > NZ_CP025268/1013461‑1013732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |