BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,028,065	T→C	intergenic (‑41/‑178)	sulA ← / → sxy	cell division inhibitor SulA/CRP‑S regulon transcriptional coactivator Sxy

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,028,065	0	T	C	100.0%	1992.4 / NA	568	intergenic (‑41/‑178)	sulA/sxy	cell division inhibitor SulA/CRP‑S regulon transcriptional coactivator Sxy
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (287/281); total (287/281)

Only 100 of 643 total aligned reads displayed.

AAGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGTACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTAA  >  NZ_CP025268/1027929‑1028201

 aGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACAt                                                                                                                                      >  2:10176625/1‑140 (MQ=255)

     cGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAg                                                                                                                                  <  2:3349122/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  1:5069848/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  2:3443928/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  1:3268625/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  2:2701967/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  1:7679298/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  2:11185937/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  2:7879887/140‑1 (MQ=255)

        cTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGa                                                                                                                               >  1:2979994/1‑140 (MQ=255)

                ttttCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAg                                                                                                                       >  1:8166348/1‑140 (MQ=255)

                ttttCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAg                                                                                                                       >  1:3096120/1‑140 (MQ=255)

                  ttCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGAt                                                                                                                     >  1:2204125/1‑140 (MQ=255)

                  ttCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGAt                                                                                                                     <  1:3925760/140‑1 (MQ=255)

                  ttCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGAt                                                                                                                     >  2:8912201/1‑140 (MQ=255)

                   tCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATc                                                                                                                    <  1:1613426/140‑1 (MQ=255)

                   tCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATc                                                                                                                    >  1:4114167/1‑140 (MQ=255)

                          agaCACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTa                                                                                                             <  1:5796115/140‑1 (MQ=255)

                            acacGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTAtt                                                                                                           >  2:7663664/1‑140 (MQ=255)

                               cgcgCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTc                                                                                                        >  2:6430527/1‑140 (MQ=255)

                                              gctgcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCa                                                                                         >  1:737232/1‑140 (MQ=255)

                                                tgcGGATGAGAACGTCGCAGAACGTTGTGCATAGCCTGACGTGTACATAATCAATCCAGCCCCTGGGAGTTACGGTATGGATGTACAGCACATCCAGTGACAACAAGGATCAACCCTATTTTCGGGATGAGCCTCGcccg                                                                                       >  2:4962969/1‑137 (MQ=255)

                                                 gcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaa                                                                                                                            <  1:10480195/102‑1 (MQ=255)

                                                 gcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAAt                                                                                      >  2:1181143/1‑140 (MQ=255)

                                                  cGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAAtt                                                                                     >  2:2010586/1‑140 (MQ=255)

                                                     aTGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACAGAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTGTCGGAAAGAGCCTCGCAAATTTTg                                                                                  <  2:9826226/140‑1 (MQ=255)

                                                      tGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGt                                                                                 <  1:2790035/140‑1 (MQ=255)

                                                          aaCGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGtt                                                                             >  1:2028775/1‑140 (MQ=255)

                                                               cgaAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGa                                                                        <  1:8408954/140‑1 (MQ=255)

                                                                    aaCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGa                                                                   <  2:1475435/140‑1 (MQ=255)

                                                                     aCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGaa                                                                  <  1:4797716/140‑1 (MQ=255)

                                                                     aCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGaa                                                                  <  2:4097002/140‑1 (MQ=255)

                                                                                  ccTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAAt                                                     >  2:1927961/1‑140 (MQ=255)

                                                                                  ccTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAAt                                                     >  2:10901658/1‑140 (MQ=255)

                                                                                  ccTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAAt                                                     >  2:288102/1‑140 (MQ=255)

                                                                                  ccTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAAt                                                     <  1:5323783/140‑1 (MQ=255)

                                                                                     gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCtt                                                  >  2:3216129/1‑140 (MQ=255)

                                                                                     gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCtt                                                  >  1:6763178/1‑140 (MQ=255)

                                                                                     gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCtt                                                  >  1:11390159/1‑140 (MQ=255)

                                                                                      aaGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCATCCCTATTTTCTGAAAGAGCCTCGCTAATTTTGTCGTTGGTGACGGGAAAACATAAATTATTCTTg                                                 <  2:1685259/140‑1 (MQ=255)

                                                                                      aaGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTg                                                 >  2:5804312/1‑140 (MQ=255)

                                                                                      aaGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTg                                                 <  2:669177/140‑1 (MQ=255)

                                                                                      aaGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTg                                                 >  1:1290647/1‑140 (MQ=255)

                                                                                       aGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGc                                                <  1:2462839/140‑1 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGcccc                                             <  2:10385981/139‑1 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            <  2:5878027/140‑1 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            >  1:11442710/1‑140 (MQ=255)

                                                                                            aCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAAcc                                                                                                                <  1:5503531/71‑1 (MQ=255)

                                                                                            aCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCtt                                           >  2:4774095/1‑140 (MQ=255)

                                                                                            aCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCtt                                           >  1:10363414/1‑140 (MQ=255)

                                                                                            aCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCtt                                           >  1:9015458/1‑140 (MQ=255)

                                                                                                aatcaatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGa                                       >  1:10099105/1‑140 (MQ=255)

                                                                                                aatcaatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGa                                       >  2:4161170/1‑140 (MQ=255)

                                                                                                  tcaatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCt                                                   <  1:3336556/126‑1 (MQ=255)

                                                                                                  tcaatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAAt                                     >  2:525426/1‑140 (MQ=255)

                                                                                                  tcaatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAAt                                     >  2:3742833/1‑140 (MQ=255)

                                                                                                   caatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATa                                    >  2:10618013/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGAt                                                                                                                     <  2:6882188/57‑1 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg                                  >  2:451242/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg                                  >  1:10990323/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg                                  >  1:1488326/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg                                  >  2:7154019/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg                                  >  1:4266240/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg                                  >  1:9629584/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg                                  >  1:5889316/1‑140 (MQ=255)

                                                                                                       ccAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGtt                                <  2:11281974/140‑1 (MQ=255)

                                                                                                          gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             >  2:8362186/1‑140 (MQ=255)

                                                                                                          gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             <  1:6039377/140‑1 (MQ=255)

                                                                                                          gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             >  1:9359673/1‑140 (MQ=255)

                                                                                                           ccccTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGACAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCt                            <  2:7275442/140‑1 (MQ=255)

                                                                                                                  gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg                     <  1:6964631/140‑1 (MQ=255)

                                                                                                                  gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg                     <  2:55006/140‑1 (MQ=255)

                                                                                                                  gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg                     <  2:2207561/140‑1 (MQ=255)

                                                                                                                    gTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTa                   <  1:6232108/140‑1 (MQ=255)

                                                                                                                       aCTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGtt                <  2:10075999/140‑1 (MQ=255)

                                                                                                                        cTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCtt                                           >  1:7225653/1‑112 (MQ=255)

                                                                                                                           tATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg                     <  2:8812939/131‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  1:4974768/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  1:4561468/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  1:7756951/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  1:8842647/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  2:2497703/140‑1 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAGTCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTTACGGa          >  1:6451948/1‑140 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             >  2:7424149/1‑121 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa          >  1:3737938/1‑140 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa          <  1:658395/140‑1 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa          <  2:3557166/140‑1 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa          >  2:9024533/1‑140 (MQ=255)

                                                                                                                              ggATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGAt         <  2:9232263/140‑1 (MQ=255)

                                                                                                                               gATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATc        >  2:8618874/1‑140 (MQ=255)

                                                                                                                                aTGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  2:8174337/136‑1 (MQ=255)

                                                                                                                                aTGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATcc       >  1:7034729/1‑140 (MQ=255)

                                                                                                                                   tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt    >  1:1817404/1‑140 (MQ=255)

                                                                                                                                   tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt    >  2:9630098/1‑140 (MQ=255)

                                                                                                                                   tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt    >  1:10765763/1‑140 (MQ=255)

                                                                                                                                    acagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTa   <  1:8688998/140‑1 (MQ=255)

                                                                                                                                     cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            <  1:6289342/98‑1 (MQ=255)

                                                                                                                                     cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTaa              >  2:6211846/1‑128 (MQ=255)

                                                                                                                                     cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTaa  >  1:3463329/1‑140 (MQ=255)

                                                                                                                                     cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTaa  >  1:9780831/1‑140 (MQ=255)

AAGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGTACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTAA  >  NZ_CP025268/1027929‑1028201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`