| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,215,618 | T→C | pseudogene (386/405 nt) | tfaP → | tail fiber assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,215,618 | 0 | T | C | 99.5% | 2507.1 / NA | 745 | pseudogene (386/405 nt) | tfaP | tail fiber assembly protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (409/332); minor base A (4/0); total (413/332) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 745 total aligned reads displayed.
CAATAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAG‑T‑T‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATT > NZ_CP025268/1215481‑1215753 | tAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGc > 1:8552684/1‑140 (MQ=255) gcAGTGGGAGGGTTAGGCTGCATTGGGAAGACTTTCAGACTATGAGCTGAAACAATCTTATTTGTCGCTGGATTATCTGTAAGCCCTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTcctg < 2:8422813/139‑3 (MQ=21) aCAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCgg < 1:5735811/140‑1 (MQ=255) aCAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCgg < 2:5668864/140‑1 (MQ=255) aGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCa > 1:9271397/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAATGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGAGATTGAATGGCCAACGCCTCCGGCAG‑t > 2:9146040/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 1:10070992/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 1:8478657/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 2:4414201/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 2:511162/1‑140 (MQ=255) ggCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t‑t > 2:10798371/1‑140 (MQ=255) cAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATCTTGAATGGCCTACGCCTCCGGCAG‑t‑tca > 2:3786919/1‑138 (MQ=255) ggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t‑tcaggc < 1:9550309/140‑6 (MQ=255) gTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGcc < 1:6227913/140‑1 (MQ=255) aaGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAg < 2:4600710/140‑1 (MQ=255) aGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGa > 1:1787531/1‑140 (MQ=255) aGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGa > 1:2303861/1‑140 (MQ=255) aGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGa > 1:5851631/1‑140 (MQ=255) aGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGa > 1:11342930/1‑140 (MQ=255) aGGCTCCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGa > 2:8514278/1‑140 (MQ=255) cATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACAt > 2:1804301/1‑140 (MQ=255) cATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACAt > 2:2512108/1‑140 (MQ=255) aTTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATc > 2:7298705/1‑140 (MQ=255) ggAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgc > 2:2290856/1‑140 (MQ=255) gcaGACTTAAAGAAGATGAGCTTAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGAAGATACATCCAGTGCGCCAGATATTGAATGGCCGACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 2:10006191/138‑1 (MQ=17) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 1:8240525/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 2:410573/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 1:10363911/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 1:10550176/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAAATTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 1:3489912/140‑1 (MQ=255) aaGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcgc > 2:352019/1‑140 (MQ=255) aaGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcgc < 1:2575584/140‑1 (MQ=255) aGACTTAAAGAAGATGCGCTGCAACAATATACTTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGcgcg < 1:704339/140‑1 (MQ=17) aGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGcgcg < 1:115734/140‑1 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTa > 1:3336148/1‑101 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGt > 1:10930230/1‑140 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGt > 1:1519298/1‑140 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGt > 1:6850501/1‑140 (MQ=255) agaagaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGt < 2:10894307/140‑1 (MQ=255) gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCTGTGCGCCAGATATTGACTGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCt > 2:9021941/1‑140 (MQ=14) gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTctct > 2:6663095/1‑140 (MQ=255) gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCt > 2:1336060/1‑140 (MQ=255) gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCt > 1:5122759/1‑140 (MQ=255) gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCt > 2:6020150/1‑140 (MQ=255) gAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGtt < 2:1884663/140‑1 (MQ=255) cTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg > 2:3377452/1‑120 (MQ=255) aaCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCa < 1:4858538/140‑1 (MQ=255) aCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc < 1:7598938/140‑1 (MQ=255) aCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc < 1:6581771/140‑1 (MQ=255) aCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc < 2:2172481/140‑1 (MQ=255) aCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc < 1:1905923/140‑1 (MQ=255) atatAATTTGTGGCTGGATTCTCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgc > 2:6248066/1‑140 (MQ=255) tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg > 2:11160000/1‑140 (MQ=255) tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg > 2:7565542/1‑140 (MQ=255) tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg > 2:8728945/1‑140 (MQ=255) ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt < 1:8771044/140‑1 (MQ=255) ttGTGGCTGGATTATCTTGAAGCACAGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGTCCAGATGACATCCGGCGAGGTGCTGGTATCTGTTTCCGTCACCGCGTCAATg < 2:1202781/140‑1 (MQ=11) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 2:4951808/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 2:9731928/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:9336352/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:1262060/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:3862911/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:9054090/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:6502802/140‑1 (MQ=255) tgtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg > 1:9835949/1‑104 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTCTCTGTTGCCGTCACCGCGTCAATGTa > 1:7384914/1‑140 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATgaa < 1:4125331/140‑3 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTa > 1:2894358/1‑140 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTa > 1:7689371/1‑140 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAAt > 1:10708151/1‑140 (MQ=255) ggCTGGAATATCTGGAAGCACTGGAACTTGTTTATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAAt > 2:5402573/1‑140 (MQ=11) gCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATc > 1:3090592/1‑140 (MQ=255) gATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGc < 2:9348821/140‑1 (MQ=255) gATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGc < 1:8035716/140‑1 (MQ=255) ttATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac < 2:3181697/140‑1 (MQ=255) ttATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac < 1:5057754/140‑1 (MQ=255) ggAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGtt < 1:11089947/140‑1 (MQ=255) aaGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa > 2:2971352/1‑140 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg > 2:8121230/1‑140 (MQ=255) tGGAACTGGTTGATACATGCAGTGCGCCAGCTATTGAATGGCCTACGCCTCCGGCAGAT‑C‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCTGCCCCGCGGTACGTCTgg > 2:10183833/1‑140 (MQ=11) tGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTgg < 1:909408/140‑1 (MQ=255) tGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTgg > 2:1459081/1‑140 (MQ=255) gTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTct > 1:3736146/1‑140 (MQ=255) gTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTct < 2:6867031/140‑1 (MQ=255) gTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTct > 2:10550104/1‑140 (MQ=255) aTACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcct > 1:4335318/1‑140 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCCTNCGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt < 1:6093412/140‑1 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt < 1:10195568/140‑1 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt > 2:1032247/1‑140 (MQ=255) ccAGTGCGACAGATAATGAATGGCCTACGCCTCCGGCAG‑TAC‑AGGCCAGATGACATCCGGCGCGGTGCTGGTAACTGTTGCCGTCACCGCGTCAAAGTAATCCAGCACAGCTTTAAGTCTGGATGTTTCTGCCTGCGTCa > 2:7804804/1‑140 (MQ=11) cAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAg > 2:7067841/1‑140 (MQ=255) tGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt > 1:4653457/1‑140 (MQ=255) tGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt > 1:7333196/1‑140 (MQ=255) tGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGACGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt > 2:2693884/1‑140 (MQ=255) ccAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGt > 2:8308547/1‑140 (MQ=255) ccAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGt > 1:5548736/1‑140 (MQ=255) cAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTc < 2:8836427/140‑1 (MQ=255) atTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGcc > 1:1746686/1‑140 (MQ=255) ggCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcc > 2:3079141/1‑112 (MQ=255) ggCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAAtt < 1:2067320/140‑1 (MQ=255) | CAATAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAG‑T‑T‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATT > NZ_CP025268/1215481‑1215753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |