BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,188,274	A→G	T63T (ACA→ACG)	CXP41_RS16625 →	fimbrial biogenesis outer membrane usher protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,188,274	0	A	G	100.0%	3105.4 / NA	886	T63T (ACA→ACG)	CXP41_RS16625	fimbrial biogenesis outer membrane usher protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (393/493); total (393/493)

Only 100 of 886 total aligned reads displayed.

GCTTATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACACCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTT  >  NZ_CP025268/3188137‑3188410

gCTTATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGcc                                                                                                                                        <  2:4151119/140‑1 (MQ=255)

  ttATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCaa                                                                                                                                      <  2:8502080/140‑1 (MQ=255)

   tATGCCGTTGAATTCAACAAAGATTTACTCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAt                                                                                                                                     <  1:9112648/140‑1 (MQ=255)

   tATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAt                                                                                                                                     <  1:4524659/140‑1 (MQ=255)

   tATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAt                                                                                                                                     >  1:6757972/1‑140 (MQ=255)

   tATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAt                                                                                                                                     <  1:5563937/140‑1 (MQ=255)

   tATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAt                                                                                                                                     <  1:5410525/140‑1 (MQ=255)

   tATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATAGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAt                                                                                                                                     <  1:3325189/140‑1 (MQ=255)

     tGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATcc                                                                                                                                   >  1:1083093/1‑140 (MQ=255)

     tGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATcc                                                                                                                                   >  1:162037/1‑140 (MQ=255)

        cGTTGAATTCAACACAGATTTACTCGAAGCCGAAGATCGTGAAAACGTTAACCGTTCCCACATTGAAACTGATGGCCAATTACCCGTCGGCAAAGATTCACTAAGCCCTCTGATTAATCCTAAGAGGACGCCAATCCAcc                                                                                                                                <  1:518955/140‑1 (MQ=255)

        cGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGNACGCCAATCCAcc                                                                                                                                <  1:9848557/140‑1 (MQ=255)

        cGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCAcc                                                                                                                                <  1:11053626/140‑1 (MQ=255)

          ttGTATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGCAAACGTTAACCTTTCCAAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCTATAAGAACTCTGATTAATAATAAGAGGACGCCATTCCACCtt                                                                                                                              <  2:948652/140‑1 (MQ=255)

          ttGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCtt                                                                                                                              >  1:7027419/1‑140 (MQ=255)

           tGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTg                                                                                                                             >  2:5953710/1‑140 (MQ=255)

            gAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGa                                                                                                                            <  1:8324314/140‑1 (MQ=255)

             aaTTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGAc                                                                                                                           <  2:3969111/140‑1 (MQ=255)

             aaTTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATGACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGAc                                                                                                                           <  1:3947654/140‑1 (MQ=255)

             aaTTCAACAAAGATTTAATCGAAGCCGAAGATCGGGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAACTATTCACTACGCACTCTGATTAATAATAAGCGGACGCCAATCCACCTTGAc                                                                                                                           <  2:7695932/140‑1 (MQ=255)

                  aacaaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCa                                                                                                                      <  2:1635458/140‑1 (MQ=255)

                  aacaaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCa                                                                                                                      >  1:951342/1‑140 (MQ=255)

                   acaaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCaa                                                                                                                     <  1:7381745/140‑1 (MQ=255)

                   acaaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCaa                                                                                                                     <  2:8670306/140‑1 (MQ=255)

                   acaaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCaa                                                                                                                     <  2:717415/140‑1 (MQ=255)

                   acaaAGATTTAAGCGAAGCCGAAGATCTTGAAAACGTTAACCTTTCCCAATTTGACACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCaa                                                                                                                     <  2:10490651/140‑1 (MQ=255)

                    caaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAAt                                                                                                                    >  1:2459673/1‑140 (MQ=255)

                     aaaGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATg                                                                                                                   <  2:9679032/140‑1 (MQ=255)

                     aaaGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATg                                                                                                                   <  2:4608798/140‑1 (MQ=255)

                     aaaGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATg                                                                                                                   <  2:119617/140‑1 (MQ=255)

                         aTTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTa                                                                                                               >  2:10576088/1‑140 (MQ=255)

                                   aGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATa                                                                                                     >  1:4120123/1‑140 (MQ=255)

                                       gAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCa                                                                                                 <  1:1893157/140‑1 (MQ=255)

                                          gATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAAc                                                                                              <  2:2096297/140‑1 (MQ=255)

                                             cGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGc                                                                                           >  1:2129018/1‑140 (MQ=255)

                                              gTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATANTAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGCTAACCAAACTGCa                                                                                          <  1:6102565/140‑1 (MQ=255)

                                               tGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAg                                                                                         >  1:9977384/1‑140 (MQ=255)

                                                gAAAACGTTAACCTGTCCCAATTTGAAACTGATGGCCAAGTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGt                                                                                        <  2:8138452/140‑1 (MQ=255)

                                                 aaaaCGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGtt                                                                                       <  2:5679211/140‑1 (MQ=255)

                                                 aaaaCGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGtt                                                                                       <  1:8661566/140‑1 (MQ=255)

                                                 aaaaCGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGtg                                                                                       <  2:929665/140‑2 (MQ=255)

                                                 aaaaCGTTAACCTTTCCCAATGTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGtt                                                                                       <  2:499496/140‑1 (MQ=255)

                                                 aaaaCGTGAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGtt                                                                                       <  2:9825722/140‑1 (MQ=255)

                                                     cGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCg                                                                                   <  1:11280294/140‑1 (MQ=255)

                                                      gTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGtt                                                                                       >  1:3118522/1‑135 (MQ=255)

                                                      gTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGt                                                                                  <  2:7911161/140‑1 (MQ=255)

                                                           ccTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGacac                                                                             <  1:4924526/140‑1 (MQ=255)

                                                           ccTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGacac                                                                             <  2:731200/140‑1 (MQ=255)

                                                           ccTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGacac                                                                             <  1:1281952/140‑1 (MQ=255)

                                                             tttCCCAATTTGAAACTGATGGCCAATTACCCTTCGGCAAATATTCACTAAGCACTCTGATTAAGAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAATCTGCAGTTTGCGTGACACCa                                                                           <  2:2966791/140‑1 (MQ=255)

                                                               tCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCaga                                                                         <  2:6657353/140‑1 (MQ=255)

                                                                cccAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCagag                                                                        >  1:7879188/1‑140 (MQ=255)

                                                                cccAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCagag                                                                        >  1:934644/1‑140 (MQ=255)

                                                                cccAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCagag                                                                        >  2:11383220/1‑140 (MQ=255)

                                                                    aTTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAAt                                                                    <  2:6470550/140‑1 (MQ=255)

                                                                    aTTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAAt                                                                    <  2:11232483/140‑1 (MQ=255)

                                                                      ttGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTa                                                                  <  2:10341113/140‑1 (MQ=255)

                                                                      ttGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTa                                                                  >  1:7173816/1‑140 (MQ=255)

                                                                       tGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTaa                                                                 <  2:10825191/140‑1 (MQ=255)

                                                                              gATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGATGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAAACAAACTGCAGTTTGCGTGACACAAGAGCAATTAACaatatt                                                          >  2:3663308/1‑140 (MQ=255)

                                                                               aTGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAGTAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACAttatta                                                         <  2:9047296/140‑1 (MQ=255)

                                                                               aTGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACAttatta                                                         >  1:1785968/1‑140 (MQ=255)

                                                                                tGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAg                                                        >  1:3479522/1‑140 (MQ=255)

                                                                                   ccAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGAt                                                     <  1:10001526/140‑1 (MQ=255)

                                                                                    cAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGAtt                                                    <  1:6464364/140‑1 (MQ=255)

                                                                                       ttACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTAc                                                 >  2:2503803/1‑140 (MQ=255)

                                                                                                           aCTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATg                                                                                                                   <  1:10527623/54‑1 (MQ=255)

                                                                                                            cTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAAc                            <  2:11035816/140‑1 (MQ=255)

                                                                                                            cTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAAc                            <  1:3733695/140‑1 (MQ=255)

                                                                                                                gCACTATGAGTAATAATAAGAGGACGCCTATCCTCCTTGACCTCCAATGGGTATTAATTGAGAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAg                        <  2:4407241/140‑1 (MQ=255)

                                                                                                                 cACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAAGTTAGTGAAAAATCTCAGc                       >  1:2279659/1‑140 (MQ=255)

                                                                                                                   ctctGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCaa                     <  2:5812188/140‑1 (MQ=255)

                                                                                                                    tctGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTATTTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACGTTTTTAGGATTTCCTGATGAATTTATTGAAAAAACTCAGCaaa                    >  2:4827900/1‑140 (MQ=255)

                                                                                                                    tctGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCtaa                    >  2:3231532/1‑140 (MQ=255)

                                                                                                                    tctGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCaaa                    >  1:11433336/1‑140 (MQ=255)

                                                                                                                     ctGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCaaaa                   >  1:2879333/1‑140 (MQ=255)

                                                                                                                     ctGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCaaaa                   >  2:3362587/1‑140 (MQ=255)

                                                                                                                      tGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAAc                  <  1:4641269/140‑1 (MQ=255)

                                                                                                                       gATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAAcc                 >  2:3565020/1‑140 (MQ=255)

                                                                                                                       gATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAAcc                 >  2:7520214/1‑140 (MQ=255)

                                                                                                                           aataataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGAt             <  2:135864/140‑1 (MQ=255)

                                                                                                                           aataataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGAt             >  1:850759/1‑140 (MQ=255)

                                                                                                                             taataaGAGGACGCCAAGCCACCTGGCCCTCCATGTGCGATTTATTGAGACCCAAACTGCAGTTTGCGTGACACCAGAGCACTTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAACACCTGATCg           <  2:6822978/140‑1 (MQ=255)

                                                                                                                              aataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTaa                                                                 >  2:8904501/1‑85 (MQ=255)

                                                                                                                              aataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTaa                                                                 <  1:8904502/85‑1 (MQ=255)

                                                                                                                              aataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGa          >  2:1522826/1‑140 (MQ=255)

                                                                                                                              aataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGa          <  2:5252966/140‑1 (MQ=255)

                                                                                                                              aataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGa          >  1:8102702/1‑140 (MQ=255)

                                                                                                                               ataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGAt         <  1:6282684/140‑1 (MQ=255)

                                                                                                                                  agagGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAATCTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAATCCTGATCGATGgt      >  2:6285923/1‑140 (MQ=255)

                                                                                                                                  agagGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgt      >  1:10176589/1‑140 (MQ=255)

                                                                                                                                  agagGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgt      >  2:2847530/1‑140 (MQ=255)

                                                                                                                                  agagGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgt      >  1:1462877/1‑140 (MQ=255)

                                                                                                                                  agagGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgt      >  2:8342856/1‑140 (MQ=255)

                                                                                                                                  agagGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgt      >  2:545399/1‑140 (MQ=255)

                                                                                                                                  agagGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgt      >  1:4286027/1‑140 (MQ=255)

                                                                                                                                  agagGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgt      >  1:5819439/1‑140 (MQ=255)

                                                                                                                                  agagGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATAAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgt      >  2:2192583/1‑140 (MQ=255)

                                                                                                                                    agGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgttg    <  1:7698638/140‑1 (MQ=255)

                                                                                                                                      gACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGgttgtt  >  1:10376199/1‑140 (MQ=255)

GCTTATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACACCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTT  >  NZ_CP025268/3188137‑3188410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`