Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 3,504,638 A→G *262* (TAA→TAG frlD → fructoselysine 6‑kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252683,504,6380AG99.8% 1659.5 / NA 477*262* (TAA→TAGfrlDfructoselysine 6‑kinase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (194/282);  minor base C (0/1);  total (194/283)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 497 total aligned reads displayed.

ATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAAGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAACTCCTCT  >  NZ_CP025268/3504501‑3504774
                                                                                                                                         |                                                                                                                                        
 tCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTggtaggta                                                                                                                                       <  2:4036031/140‑1 (MQ=255)
 tCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTggtaggta                                                                                                                                       <  1:1924974/140‑1 (MQ=255)
   gACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGtata                                                                                                                                     <  2:5463328/140‑1 (MQ=255)
      acCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACg                                                                                                                                  <  2:10497477/140‑1 (MQ=255)
      acCATGGGTGCCGGAGATTCGTTCATNGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACg                                                                                                                                  <  1:6935160/140‑1 (MQ=255)
      acCATGGGTGCCGGAGATTCGGTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGACCGGCGTGCGCGGCGAAAACCAGTCAGTACCACGGTGCCTGGTAGGTCTAACg                                                                                                                                  >  2:8582632/1‑140 (MQ=255)
        cATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGtt                                                                                                                                >  1:5258900/1‑140 (MQ=255)
        cATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTGTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGtt                                                                                                                                >  1:5097963/1‑140 (MQ=255)
         aTGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTg                                                                                                                               <  1:4973643/140‑1 (MQ=255)
         aTGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTg                                                                                                                               <  2:4989699/140‑1 (MQ=255)
          tGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGACCGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTgg                                                                                                                              >  2:2716382/1‑140 (MQ=255)
          tGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTgg                                                                                                                              >  2:2894145/1‑140 (MQ=255)
          tGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTgg                                                                                                                              >  1:8036058/1‑140 (MQ=255)
           gggTGCCGTAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCATTACCACGGTGCCTGGTAGGTATAACGTTGGc                                                                                                                             <  2:9333990/140‑1 (MQ=255)
           gggTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGc                                                                                                                             <  1:4493217/140‑1 (MQ=255)
           gggTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGc                                                                                                                             <  2:5626751/140‑1 (MQ=255)
           gggTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGc                                                                                                                             <  2:5921889/140‑1 (MQ=255)
            ggTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGAGAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCg                                                                                                                            <  2:9065463/140‑1 (MQ=255)
            ggTGCCGGAGAGTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCAGTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCg                                                                                                                            <  1:10220045/140‑1 (MQ=255)
               gCCGGTGATTCGGTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCCTTCAGTACCACGGTGCCTGGTCGGTATAACGTTGGCGTGa                                                                                                                         >  2:9935755/1‑140 (MQ=255)
                ccGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAg                                                                                                                        <  2:3200413/140‑1 (MQ=255)
                 cGGAGATTCGTTCATTGCCGGATTCCTATGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGc                                                                                                                       <  1:581123/140‑1 (MQ=255)
                  ggcgaTTCGTTCAATGCCGGATTCATTAGCGGATGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATCACGTTGGCGGGAGCa                                                                                                                      >  2:3625575/4‑140 (MQ=255)
                  ggAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCa                                                                                                                      >  1:5668190/1‑140 (MQ=255)
                  ggAGATTCGTTCATTGCCGGATTCCTATGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCa                                                                                                                      >  1:6418278/1‑140 (MQ=255)
                   gagaTTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCAt                                                                                                                     >  1:5463264/1‑140 (MQ=255)
                      aTTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCTGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCtt                                                                                                                  <  1:2337835/140‑1 (MQ=255)
                      aTTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCtt                                                                                                                  >  2:10334050/1‑140 (MQ=255)
                        tCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCCTTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCa                                                                                                                <  2:1977580/140‑1 (MQ=255)
                        tCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCa                                                                                                                <  1:7509949/140‑1 (MQ=255)
                        tCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCa                                                                                                                <  1:11415994/140‑1 (MQ=255)
                        tCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCa                                                                                                                >  1:7841650/1‑140 (MQ=255)
                        tCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCa                                                                                                                <  1:8542907/140‑1 (MQ=255)
                        tCGTACCTTGCCGGATACCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGACCGGCGTGCGCGGCGAAAACCAATCAGTACCACGGTGCCTGGGAGGTAAAACGTTGGCGTGAGCATCTTCa                                                                                                                >  2:8180892/1‑140 (MQ=255)
                          gTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACg                                                                                                              <  2:8692802/140‑1 (MQ=255)
                           ttCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGc                                                                                                             <  1:2059591/140‑1 (MQ=255)
                           ttCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGc                                                                                                             <  1:3453499/140‑1 (MQ=255)
                            tCAGTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGAAGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGcc                                                                                                            <  1:9768574/140‑1 (MQ=255)
                             cATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCATGCCa                                                                                                           <  1:8769511/140‑1 (MQ=255)
                             cATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCa                                                                                                           <  1:6009524/140‑1 (MQ=255)
                                tGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACg                                                                                                        <  2:9532280/140‑1 (MQ=255)
                                  ccGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTg                                                                                                      <  1:4204226/140‑1 (MQ=255)
                                          cTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACt                                                                                              >  1:133252/1‑140 (MQ=255)
                                             tGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGc                                                                                           <  2:4219970/140‑1 (MQ=255)
                                                ggCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCgg                                                                                        >  1:6433132/1‑140 (MQ=255)
                                                    ggTCTGGGGGGATGACATTACCGCTGGCGATTGCGCTGGGAACGGCGTGCGCGGCGAAAACCTTTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATATTCACGCAAACGTGCTTTTACTTGCCGGaaaa                                                                                    <  1:3870628/140‑1 (MQ=255)
                                                      tCTGCGGGTATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCAAACGTGCTGTTACTTGCCGTAAAACg                                                                                  <  1:8925517/140‑1 (MQ=255)
                                                      tCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACAATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACg                                                                                  <  1:1591162/140‑1 (MQ=255)
                                                       cTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGa                                                                                 <  2:3498802/140‑1 (MQ=255)
                                                         gCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGAcc                                                                               >  2:1126006/1‑140 (MQ=255)
                                                          cGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGAccc                                                                              >  2:5414328/1‑140 (MQ=255)
                                                                tGAAATTACCGCTGGCGATAGCGCAGGGAACGGGGTGCGCGGCTAAAACATTTCAGTACCCCGGTGCCTGGTTGGTATAACGTGGGGGTGAGCATATTCACGCCAAGGTGCTGTTAGTTGCCGGAAAACGACCCTATAAt                                                                        <  1:7902418/140‑1 (MQ=255)
                                                                    aTTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGa                                                                    >  1:5288702/1‑140 (MQ=255)
                                                                     ttACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCTAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAg                                                                   <  1:7772325/140‑1 (MQ=255)
                                                                     tgaCCGCCGGCGATCGCGCAGGGAACGGCGGGCGCGCCGAACACCATTCAGTACCACGGGGCCTGGTAGGTAGAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTAACTTGCCGGAAAACGACCCTATAATCCGAg                                                                   <  2:9721104/138‑1 (MQ=255)
                                                                           cAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAATCGACCCTATAATCCGAGTGattc                                                             >  1:8390277/1‑140 (MQ=255)
                                                                            aGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAattca                                                            <  1:10949006/140‑1 (MQ=255)
                                                                            aGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAattca                                                            <  2:6562383/140‑1 (MQ=255)
                                                                             ggCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAattcat                                                           >  1:6290439/1‑140 (MQ=255)
                                                                             ggCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAattcat                                                           >  1:10387834/1‑140 (MQ=255)
                                                                             ggCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAattcat                                                           >  2:10770265/1‑140 (MQ=255)
                                                                              gCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGTGTAattcatt                                                          >  2:3299632/1‑140 (MQ=255)
                                                                              gCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAattcatt                                                          >  1:3629655/1‑140 (MQ=255)
                                                                              gCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGAGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCAATAATCCGAGTAattcatt                                                          >  2:3838151/1‑140 (MQ=255)
                                                                                 aTAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTTGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCtt                                                       <  1:3014572/140‑1 (MQ=255)
                                                                                  tAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCttt                                                      >  2:1087460/1‑140 (MQ=255)
                                                                                        aGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCa                                                >  1:1738932/1‑140 (MQ=255)
                                                                                         gggAACGGCGTGCGCGGCTAAAACCATTAAGTACCACGGTGCCTGGTTGGTATAACGTTGGCGTTAGCATATTCACGCCAACGTGCTGTTACTTGACGGAAAACGACCCTATAATCAGAGTAATTCATTCTTTATTTCAg                                               <  2:7074560/140‑1 (MQ=255)
                                                                                         gggAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAg                                               >  2:639933/1‑140 (MQ=255)
                                                                                           gAACGGCGTGCGCGGCGAAACCCATGCAGCACCACGGTGCCTGGTAGGTATAACGGTGGCGTCAGCATCTACACGCCAACGTGCTGTTACTTGCCCGAAAACGACCCTATAATCCGAGCCATTCATTCTATATTTCAggg                                             <  2:4483905/140‑1 (MQ=255)
                                                                                           gAACGGCGGGCGCGGCGAACACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCGTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCCggg                                             <  2:6879547/140‑1 (MQ=255)
                                                                                               ggCGTGCGCGGCGAAATCCATTCAGTACCACGGTGCATGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACACTATCATCCGAGTAATTCATTCTTTATTTCAGGGTCGa                                         >  2:10003359/1‑140 (MQ=255)
                                                                                               ggCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGa                                         >  2:3716253/1‑140 (MQ=255)
                                                                                                    gcgcGGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATg                                    >  1:9598542/1‑140 (MQ=255)
                                                                                                     cgcgGCGAAAACCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGt                                   <  2:7478152/140‑1 (MQ=255)
                                                                                                     cgcgGCGAAAACCATTCAGTACCACGGGGCCTGGTAGGTATACCGGTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAACACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGt                                   <  1:8155437/140‑1 (MQ=255)
                                                                                                             acaCCAGTCAGTCCCACGGCGCCGGGTAGGTATATCGTTGGCGTGACCAACTTCACGCCAACGTGCTGTGACTTGCCGGAACACGACCCTCTCATCCGAGTACTTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACg                           <  2:129016/138‑1 (MQ=255)
                                                                                                             aaaCCATTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACg                           <  2:6290439/140‑1 (MQ=255)
                                                                                                                  aTTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCTTTAGAATCTAAACGCCAACGTGCTGTTACTTGCCGTAAAACGACCCTATAATCCGAGTAATTCATTATTTATTTCAGGGTCGATTATGTCAGCTACGGACCg                      <  1:2827043/140‑1 (MQ=255)
                                                                                                                  aTTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCg                      <  1:6868757/140‑1 (MQ=255)
                                                                                                                  aTTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCg                      >  2:7644040/1‑140 (MQ=255)
                                                                                                                  aTTCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCg                      <  1:393428/140‑1 (MQ=255)
                                                                                                                  aTTCAGTACCACGGTGCCTGGTAGGTATAACGTGGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATACTCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCg                      <  2:10136836/140‑1 (MQ=255)
                                                                                                                    tCAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCt                    >  1:917582/1‑140 (MQ=255)
                                                                                                                     ccgTACCACGGAGCCTGGTCGGTAAACCGTAGGCGTGAGCATCTTCACGCCAACGTGCTGCACCGCCCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCCGGGTCGATTATGTCAGCTACGGACCGCTa                   <  1:7138646/138‑1 (MQ=255)
                                                                                                                     cAGTACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTa                   <  2:2344094/140‑1 (MQ=255)
                                                                                                                        tACCACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTGGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTActc                <  1:2678713/140‑1 (MQ=255)
                                                                                                                           cACGGTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCtca             >  1:4777997/1‑140 (MQ=255)
                                                                                                                              ggTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACGTGCCGGAAAACGACCCTATACTCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCtcatca          <  1:10798198/140‑1 (MQ=255)
                                                                                                                               gTGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCaa         <  2:1766715/140‑1 (MQ=255)
                                                                                                                                tGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAAc        >  1:6601465/1‑140 (MQ=255)
                                                                                                                                tGCCTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAAc        >  2:7958926/1‑140 (MQ=255)
                                                                                                                                  ccTGGTCGGTATAACGTTGGCGTGAGCCTCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCGACTCTCATCAActc      >  2:1578299/1‑140 (MQ=255)
                                                                                                                                  ccTGGTAGGTATAACGTTGGCGTGAGCATCTTCTCGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAAGTCATTCGTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAActc      >  2:4765860/1‑140 (MQ=255)
                                                                                                                                  ccTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTCTTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAActc      >  1:10143383/1‑140 (MQ=255)
                                                                                                                                  ccTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAActc      <  2:249396/140‑1 (MQ=255)
                                                                                                                                  ccTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAActc      >  1:9670309/1‑140 (MQ=255)
                                                                                                                                  ccTGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACGTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAActc      <  1:7409872/140‑1 (MQ=255)
                                                                                                                                    tGGTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAActcct    <  1:10537953/140‑1 (MQ=255)
                                                                                                                                      gTAGGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAACTCctct  >  1:1220725/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                        
ATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAAGTATAACGTTGGCGTGAGCATCTTCACGCCAACGTGCTGTTACTTGCCGGAAAACGACCCTATAATCCGAGTAATTCATTCTTTATTTCAGGGTCGATTATGTCAGCTACGGACCGCTACTCTCATCAACTCCTCT  >  NZ_CP025268/3504501‑3504774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: