BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	370,593	T→C	pseudogene (304/867 nt)	mhpC →	2‑hydroxy‑6‑oxonona‑2,4‑dienedioate hydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	370,593	0	T	C	100.0%	1716.8 / NA	491	pseudogene (304/867 nt)	mhpC	2‑hydroxy‑6‑oxonona‑2,4‑dienedioate hydrolase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (283/208); total (283/208)

Only 100 of 491 total aligned reads displayed.

GCAATATCGATCCGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATTAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTT  >  NZ_CP025268/370456‑370729

   atatCGATCCGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTg                                                                                                                                     >  1:8355628/1‑140 (MQ=255)

   atatCGATCCGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTg                                                                                                                                     >  1:816312/1‑140 (MQ=255)

        gATCCGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGatat                                                                                                                                <  2:1750977/140‑1 (MQ=255)

            cGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGcc                                                                                                                            >  2:838970/1‑140 (MQ=255)

            cGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGcc                                                                                                                            >  1:773541/1‑140 (MQ=255)

            cGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGcc                                                                                                                            >  1:5083086/1‑140 (MQ=255)

                  tAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATc                                                                                                                      <  1:359119/140‑1 (MQ=255)

                   agagGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATcc                                                                                                                     <  2:3179497/140‑1 (MQ=255)

                   agagGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATcc                                                                                                                     <  1:4952590/140‑1 (MQ=255)

                   agagGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGACATCGCCAAAATcc                                                                                                                     <  1:9842213/140‑1 (MQ=255)

                      ggCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCAcc                                                                                                                  <  1:574112/140‑1 (MQ=255)

                      ggCGGGCTATCGGGTGATCCTGCTGGAGTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTTATAGTGGTTCGCGAGGGGCTCTTAATGGACGAATCGTGAATTGCGGGGTGGATCAACTGGATATCGCCCTAATCCAcc                                                                                                                  >  2:2361287/1‑140 (MQ=255)

                       gCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACct                                                                                                                 >  1:5535977/1‑140 (MQ=255)

                        cGGGATATCGGGTGATCCTGCTGGATTGTCCGGGTTGGTGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCTCCAAAATCCACctg                                                                                                                <  1:4875600/140‑1 (MQ=255)

                           gCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACctgctg                                                                                                             >  1:5684505/1‑140 (MQ=255)

                           gCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACctgctg                                                                                                             >  1:7854209/1‑140 (MQ=255)

                           gCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACctgctg                                                                                                             >  2:9647722/1‑140 (MQ=255)

                           gCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACctgctg                                                                                                             >  2:7383876/1‑140 (MQ=255)

                              aTCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGc                                                                                                          <  1:10308723/140‑1 (MQ=255)

                                cGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATCTCGCCAAAATCCACCTGCTGGGcca                                                                                                        >  2:1974891/1‑138 (MQ=255)

                                   gTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTc                                                                                                     <  2:10083041/140‑1 (MQ=255)

                                     gATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGa                                                                                                   <  1:9627807/140‑1 (MQ=255)

                                     gATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGa                                                                                                   >  2:9283027/1‑140 (MQ=255)

                                        ccTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgg                                                                                                >  1:10785749/1‑140 (MQ=255)

                                         ctgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATggg                                                                                               >  2:6524104/1‑140 (MQ=255)

                                         ctgctgGATGGTCCGGGTTGGGGCAAGTGCGATTCGGTCGTTAATAGTGGTTCGCTATCGGATCTTAATGCACGAATCCTG‑AAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  2:2606471/140‑1 (MQ=255)

                                          tgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  1:2988967/140‑1 (MQ=255)

                                          tgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  2:155386/140‑1 (MQ=255)

                                          tgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  2:9475658/140‑1 (MQ=255)

                                          tgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  2:8065657/140‑1 (MQ=255)

                                          tgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  1:2062695/140‑1 (MQ=255)

                                          tgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  1:5246702/140‑1 (MQ=255)

                                          tgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  1:3994257/140‑1 (MQ=255)

                                          tgctgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGGTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  2:6198854/140‑1 (MQ=255)

                                          tgctgGATTGTCCGGGTTGGGGCAAGAGCGAGTCGGTCGTTAATAGTGGTGCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  1:8546152/140‑1 (MQ=255)

                                          tgctgGAGTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGAGGTTCTCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGACAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  2:1116972/140‑1 (MQ=255)

                                            ctgGATTGTCCGGGTTGGGGCAAGTGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAAATGGATATCGCCAAAATCCACCTGCTGGGCAACGCGATgggggg                                                                                            >  1:4510009/1‑140 (MQ=255)

                                             tgGATTGTCCGGGTTGGGGCCAGAGCGATTCGGTCGTTAATGGTGGTTCGCGATCGGATCTTAATGCACGAAGCCTGAAAAGCGTGGTGGCTCAACTGGATATCGCCAAAATCCCCCTGCGGGGCCACTCGAGGGGGGGc                                                                                           >  2:6125750/1‑140 (MQ=255)

                                             tgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGc                                                                                           <  1:1839442/140‑1 (MQ=255)

                                             tgGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGc                                                                                           >  1:9248914/1‑140 (MQ=255)

                                               gATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGTATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCa                                                                                         <  2:1642488/140‑1 (MQ=255)

                                               gATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCa                                                                                         <  2:3329910/140‑1 (MQ=255)

                                               gATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAACCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCa                                                                                         <  1:5915419/140‑1 (MQ=255)

                                               gATTGTCCGGGATGGGGCAAGAGCGAGTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCa                                                                                         <  1:7512740/140‑1 (MQ=255)

                                               gATTGACCGGCCGGGGGCAAGAGCGAGTCGGTCGTGCAGAGTGGGTCGCCATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCACCTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCa                                                                                         <  1:7229315/140‑1 (MQ=255)

                                                aTTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGAGCAACTGGATATCGCCCAAATCCACCTGCTGGGCTACTCGAGGGGGGGCGAt                                                                                        >  2:10489688/1‑140 (MQ=255)

                                                 ttGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATa                                                                                       >  1:2325810/1‑140 (MQ=255)

                                                 ttGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATa                                                                                       >  1:4226835/1‑140 (MQ=255)

                                                 ttGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATa                                                                                       >  2:10717073/1‑140 (MQ=255)

                                                 ttGTCCGGGGTGGGGCAAGAGCGATTCGGTCGTTCATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGAGCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGccttc                                                                                       >  1:3278372/1‑137 (MQ=255)

                                                    tCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGtt                                                                                    >  2:9763647/1‑140 (MQ=255)

                                                    tCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGtt                                                                                    >  1:2707702/1‑140 (MQ=255)

                                                    tCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGtt                                                                                    >  1:3426667/1‑140 (MQ=255)

                                                      cGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCt                                                                                  >  2:4615498/1‑140 (MQ=255)

                                                      cGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCt                                                                                  >  1:2883040/1‑140 (MQ=255)

                                                              ggCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGtt                                                                          <  2:4871037/140‑1 (MQ=255)

                                                              ggCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGtt                                                                          >  1:913441/1‑140 (MQ=255)

                                                              ggCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAAATGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGtt                                                                          >  2:724281/1‑140 (MQ=255)

                                                              ggCAAGAGCGACTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCACCTCGATGGGGGGCCATAGTTCTGTGGCGtt                                                                          <  1:10492940/140‑1 (MQ=255)

                                                                  agagCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATCGTTCTGTGGCGTTCAcc                                                                      >  2:2808307/1‑140 (MQ=255)

                                                                   gagCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATCGTTCTGTGGCGTTCAccc                                                                     >  2:2427050/1‑140 (MQ=255)

                                                                   gagCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCAccc                                                                     >  2:1149747/1‑140 (MQ=255)

                                                                   gagCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAAGGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCAGAGTTCTGTGGCGTTCAccc                                                                     >  2:2215981/1‑140 (MQ=255)

                                                                              tCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCg                                                          <  1:10028032/140‑1 (MQ=255)

                                                                               cGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCgg                                                         <  2:1038211/140‑1 (MQ=255)

                                                                                 ttAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAg                                                       <  2:8270007/140‑1 (MQ=255)

                                                                                    aTAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAgcgc                                                    <  1:955226/140‑1 (MQ=255)

                                                                                        tGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCg                                                >  1:6215140/1‑140 (MQ=255)

                                                                                        tGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCg                                                >  1:10550440/1‑140 (MQ=255)

                                                                                        tGGTTAGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCg                                                >  2:4402574/1‑140 (MQ=255)

                                                                                          gTTCGCGATCGGATCTTAATGCTCGAATCCTGAAAAGCGTGGTGGATCTACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATCGTTCTGTGGCGTTCGCCCTTAAATGGCCGGAGCGCGTCGGc                                              >  2:9101161/1‑140 (MQ=255)

                                                                                          gTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATgggg                                                                                              <  2:5053400/92‑1 (MQ=255)

                                                                                          gTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGc                                              >  2:8538804/1‑140 (MQ=255)

                                                                                          gTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGc                                              >  2:7044386/1‑140 (MQ=255)

                                                                                          gTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGc                                              >  2:5467557/1‑140 (MQ=255)

                                                                                          gTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGc                                              >  2:5276966/1‑140 (MQ=255)

                                                                                          gTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGc                                              >  1:9000718/1‑140 (MQ=255)

                                                                                          gTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGc                                              >  1:6748249/1‑140 (MQ=255)

                                                                                            tCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCaa                                            >  2:3375686/1‑140 (MQ=255)

                                                                                             cgcgATCGGATCTTAATTCACGAATCATGAAAAGCGTGGTGGATCAACTGGATATCTCCAAAATCCACCTGCTGGGCAAATCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCaaa                                           >  2:11341881/1‑140 (MQ=255)

                                                                                             cgcgATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCaaa                                           >  2:10886810/1‑140 (MQ=255)

                                                                                              gcgATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAAc                                          <  1:2586462/140‑1 (MQ=255)

                                                                                               cgATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCCACTGGATATCTCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAACTGGCCGGAGCGCGTCGGCAAAcg                                         >  2:6932803/1‑139 (MQ=255)

                                                                                               cgATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACt                                         >  1:1245558/1‑140 (MQ=255)

                                                                                                           aaTGCACGAATCCTGAAAAGCGTGGTGGCTCAACGGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAAAGGCCGGAGCGCGTCGGCAAACTGGTGCTGATggg                             <  2:7522847/140‑1 (MQ=255)

                                                                                                           aaTGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATggg                             >  2:2059549/1‑140 (MQ=255)

                                                                                                           aaTGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGATCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATggg                             >  1:9937545/1‑140 (MQ=255)

                                                                                                                aCGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGgcggcg                        >  2:6312794/1‑140 (MQ=255)

                                                                                                                aCGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGgcggcg                        >  2:8789405/1‑140 (MQ=255)

                                                                                                                  gAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGt                      >  1:1474674/1‑140 (MQ=255)

                                                                                                                  gAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGt                      >  1:2125928/1‑140 (MQ=255)

                                                                                                                       cTGAACAGCGTGGTGCATCCCCGGGATATCGCCAAAAGCCACCTGCTGGGCAACTCGATGGGGTGCCATCCTTCTGTGGCGTTCACCCTTACCTGCCCGGAGCGCGTCGGCAAACAGGTGCTGATGGGCGGCGGTACggg                 <  2:3709854/140‑1 (MQ=255)

                                                                                                                       cTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAACTCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACggg                 <  2:6020387/140‑1 (MQ=255)

                                                                                                                       cTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACggg                 <  2:4196753/140‑1 (MQ=255)

                                                                                                                           aaaGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGggcggc             <  2:8968233/140‑1 (MQ=255)

                                                                                                                            aaGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCa            <  1:1615145/140‑1 (MQ=255)

                                                                                                                               cGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTCCGGGCGGCATgt         >  1:11088436/1‑139 (MQ=255)

                                                                                                                               cGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGa         >  2:7861792/1‑140 (MQ=255)

                                                                                                                                gtggtgGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAg        <  2:579454/140‑1 (MQ=255)

                                                                                                                                      gATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAgtttgtt  <  1:10098490/140‑1 (MQ=255)

GCAATATCGATCCGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATTAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTT  >  NZ_CP025268/370456‑370729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`