| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 4,426,442 | T→C | pseudogene (275/275 nt) | yjfY ← | DUF1471 family protein YjfY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,426,442 | 0 | T | C | 99.8% | 1701.8 / NA | 490 | pseudogene (275/275 nt) | yjfY | DUF1471 family protein YjfY |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (190/299); minor base G (1/0); total (191/299) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 518 total aligned reads displayed.
GAAGTAAAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGTTAGCGATAAATATCCGCGCTGGCGTG‑A‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGA > NZ_CP025268/4426306‑4426577 | gAAGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAg < 1:3632860/140‑1 (MQ=255)gAAGTAGAACACGCGCTGCGGAAATTTCCTGCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAg < 1:3063605/140‑1 (MQ=255)gAAGTAGAACACGCGCTGCGGAAATTTCCGTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAg < 1:5842802/140‑1 (MQ=255) aaGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGc > 1:6665246/1‑140 (MQ=255) aaGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGc > 1:4186897/1‑140 (MQ=255) aaGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGc > 2:4311539/1‑140 (MQ=255) aGTAGAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCg < 1:4713231/140‑1 (MQ=255) acacGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCAAATTCCGCAGCCGTTTTTCAAAAAAAACCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAat < 1:5523141/140‑1 (MQ=255) acGCGCTGCGGAAATTTCCGTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAatat < 2:3909826/140‑1 (MQ=255) cgcgCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTGCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATc > 1:6141837/1‑140 (MQ=255) cgcgCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATc > 2:10305220/1‑140 (MQ=255) cgcgCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATc > 2:11265690/1‑140 (MQ=255) cgcgCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATc > 1:10069605/1‑140 (MQ=255) gcTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTGTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTCTACCTGGGGCTAGCGATAAATATCcgc > 1:8273643/1‑140 (MQ=255) cTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCcgcg < 1:139975/140‑1 (MQ=255) cTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCcgcg < 2:4715930/140‑1 (MQ=255) cTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCcgcg < 2:1721756/140‑1 (MQ=255) cTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCcgcg < 2:2090310/140‑1 (MQ=255) cTGAGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCTTTGGTTATACATTGTGCTAGCGATAAATCTCcgcg < 2:5788646/140‑1 (MQ=255) gCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCt > 1:6394375/1‑140 (MQ=255) gAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGc < 2:7279396/140‑1 (MQ=255) tttCCTTCCGCGGGAGATCACGGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTgc < 1:1146775/140‑2 (MQ=255) tccttcctCGGGAGATAACTGGTCTAATTCCGCATCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTAGCGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTgcat < 2:4587118/140‑4 (MQ=255) tccttcctCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTgcat > 1:2299227/1‑137 (MQ=255) tccttcctCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGAGCTAGCGATAAATATCCGCTCTGGCGTgcat > 2:6856348/1‑137 (MQ=255) cGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGt < 1:2073723/140‑1 (MQ=255) aaCTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTcccc > 1:1453613/1‑140 (MQ=255) aCTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCACACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCg < 1:1124645/140‑1 (MQ=255) cTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCgg > 1:9595516/1‑140 (MQ=255) tCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTcc < 2:4976862/140‑1 (MQ=255) tAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCg > 1:10292665/1‑140 (MQ=255) ttCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCAt < 2:10943373/140‑1 (MQ=255) ccGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCa > 2:6335877/1‑140 (MQ=255) cGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATACATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAg < 2:3200639/140‑1 (MQ=255) cGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAg < 2:8640236/140‑1 (MQ=255) gCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGa > 2:5420149/1‑140 (MQ=255) cAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGaa > 2:3512516/1‑140 (MQ=255) cAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGaa > 2:10521705/1‑140 (MQ=255) cAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGaa < 1:7871384/140‑1 (MQ=255) cAGCCGTTTTTCAAAAAAAAGCCCCATGAGCATGGTGCAAAGCAAACAAACGCAATGTTTCGTTGGTAATACCTGGTGCTACCGATAAATATCCGCTCTGTCGTG‑ATTATTGCCTTTACTCCCCGGTTCCAGCAACAGaa < 2:5175115/140‑1 (MQ=255) ccGTTTTTCAATAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGTCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGAA‑TATTGACGTTACTCACCGGTTACCGCATCAGAATTa < 2:562275/140‑1 (MQ=255) ccGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTa < 2:3069492/140‑1 (MQ=255) ccGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTa < 2:2651106/140‑1 (MQ=255) ccGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTa < 2:9358871/140‑1 (MQ=255) gattttCAAAACAAAGCCCCCTGCGAAGGGGGCACAGCAAACGATGGCCATGTTTCGTTGGTTATACCGGGTGCTAGCGAGAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 2:6092445/138‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCTTTACTCCCCGGTTCCCGCATCAGAATTAct < 2:1157059/140‑2 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:9216131/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 2:3441269/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 1:6977306/140‑1 (MQ=255) gTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 2:4485880/140‑1 (MQ=255) gTTTTTAAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACg < 2:8992314/140‑1 (MQ=255) tCAACAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTAGACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGgta < 1:10860642/140‑1 (MQ=255) aaaaaaaaGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGgtagt < 1:8926212/140‑1 (MQ=255) aaaaaaaGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGgtagta > 2:1934330/1‑140 (MQ=255) aaaGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGtt < 2:8041569/140‑1 (MQ=255) aaaGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGGAGTACGtt < 1:4029576/140‑1 (MQ=255) aaGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTg < 1:9667577/140‑1 (MQ=255) gCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTgcg < 1:2852877/140‑1 (MQ=255) gCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTgcg < 1:5311711/140‑1 (MQ=255) ccccTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGcc < 1:1954863/140‑1 (MQ=255) ccccTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGcc < 1:5741990/140‑1 (MQ=255) cTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTg < 2:8370316/140‑1 (MQ=255) tGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTgc < 2:7094659/140‑1 (MQ=255) gcaaagcaaaCTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCTGTTAATCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGttt > 2:3315704/1‑140 (MQ=255) caaagcaaaCTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTttc > 2:2849534/1‑140 (MQ=255) aaagcaaaCTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTttct > 2:78121/1‑140 (MQ=255) aagcaaaCTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTttctt < 1:3365610/140‑1 (MQ=255) aaCTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCAttt < 2:1407690/140‑1 (MQ=255) aaCTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCAttt < 2:4122145/140‑1 (MQ=255) aaCTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAAGATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCAttt < 2:3816401/140‑1 (MQ=255) aCTATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTa > 1:7607225/1‑140 (MQ=255) tATGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAAt > 1:7320136/1‑140 (MQ=255) tGGCAATGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGc < 1:8520379/140‑1 (MQ=255) tGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGACTTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACg > 1:3168852/1‑140 (MQ=255) tGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACg > 1:7091726/1‑140 (MQ=255) tGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACg > 1:5581371/1‑140 (MQ=255) tGTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTAAGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACg > 2:5896428/1‑140 (MQ=255) gTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGt < 1:2664821/140‑1 (MQ=255) gTTTCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGt < 1:2436809/140‑1 (MQ=255) tttCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTg > 2:5482456/1‑140 (MQ=255) tttCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTg > 2:3671174/1‑140 (MQ=255) tttCGTTGGTTATACCTGGAGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTg > 1:4534177/1‑140 (MQ=255) tCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCt < 1:3882497/140‑1 (MQ=255) tCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCt < 1:4913230/140‑1 (MQ=255) tCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCt < 1:9497885/140‑1 (MQ=255) tCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCt < 1:8711549/140‑1 (MQ=255) tCGTTGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCt < 2:7523367/140‑1 (MQ=255) ttGGTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCg < 2:963046/140‑1 (MQ=255) gTTATACCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCtt > 1:51194/1‑140 (MQ=255) gtagcccTGGAGCTAGCGCTAACTCTCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGGTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCATGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCttt < 2:8263736/135‑1 (MQ=255) tataCCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTc > 1:6003781/1‑140 (MQ=255) aCCTGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCatt > 1:10579973/1‑138 (MQ=255) tGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTTCTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCTTTTAATGCCTGACGTGCTTCGCTTTCAGTGGc < 2:654425/140‑1 (MQ=255) tGGTGCTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGc < 1:6850576/140‑1 (MQ=255) gtgcTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa > 1:10453385/1‑140 (MQ=255) gtgcTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa < 1:9958218/140‑1 (MQ=255) gtgcTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa > 2:2242161/1‑140 (MQ=255) gtgcTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa < 2:2454180/140‑1 (MQ=255) gtgcTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa > 2:9495686/1‑140 (MQ=255) gtgcTAGCGATAAATATCCGCGCTGGCGTGCA‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTAAGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGa > 2:9096455/1‑140 (MQ=255) | GAAGTAAAACACGCGCTGCGGAAATTTCCTTCCTCGGGAGATAACTGGTCTAATTCCGCAGCCGTTTTTCAAAAAAAAGCCCCCTGCGAAGGGGGCAAAGCAAACTATGGCAATGTTTCGTTGGTTATACCTGGTGTTAGCGATAAATATCCGCGCTGGCGTG‑A‑TATTGCCGTTACTCCCCGGTTCCCGCATCAGAATTACGTGGTAGTACGTTGCGCCTTGCGCATCTGTTTCTTCATTTAATGCCTGACGTGCTTCGCTTTCAGTGGCGA > NZ_CP025268/4426306‑4426577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |