Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 4,435,089 T→C *287* (TAA→TAG qorB ← NAD(P)H:quinone oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252684,435,0890TC99.5% 1434.1 / NA 414*287* (TAA→TAGqorBNAD(P)H:quinone oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (242/169);  minor base G (2/0);  total (244/170)
Fisher's exact test for biased strand distribution p-value = 5.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 433 total aligned reads displayed.

TAACAGGGCGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAATTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATA  >  NZ_CP025268/4434952‑4435224
                                                                                                                                         |                                                                                                                                       
tAACAGGGCGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAattaacta                                                                                                                                       <  1:6999689/140‑1 (MQ=255)
       gCGTACAGCACGCCGCTAATCATTACTGGCATCCATTGTTCTGTCAGAAGAAAGTTCAGGAAGGAGACATGATTGCTCCCGGCATCCCGTCTTTATCAGAGTGGATGCGGGATGATGCCACTTTAATTAACTAGttatta                                                                                                                                <  2:9225480/140‑1 (MQ=255)
       gCGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGttatta                                                                                                                                <  1:6518639/140‑1 (MQ=255)
       gCGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGttatta                                                                                                                                <  1:10079239/140‑1 (MQ=255)
       gCGTACAGCACGCCGCTAATCATTACTGGCAACCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAAATAACTAGttatta                                                                                                                                >  2:9790408/1‑140 (MQ=255)
        cGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTaa                                                                                                                               >  1:5799906/1‑140 (MQ=255)
        cGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTaa                                                                                                                               >  1:3883618/1‑140 (MQ=255)
        cGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTaa                                                                                                                               >  1:7817994/1‑140 (MQ=255)
        cGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTaa                                                                                                                               >  2:3571527/1‑140 (MQ=255)
        cGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTaa                                                                                                                               >  1:1847738/1‑140 (MQ=255)
         gTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAAc                                                                                                                              >  1:1401877/1‑140 (MQ=255)
         gTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAAc                                                                                                                              >  1:5178580/1‑140 (MQ=255)
         gTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAAc                                                                                                                              >  1:5054931/1‑140 (MQ=255)
         gTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAAc                                                                                                                              >  1:4066591/1‑140 (MQ=255)
         gTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAAc                                                                                                                              >  2:7166148/1‑140 (MQ=255)
         gTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAAc                                                                                                                              >  2:5690486/1‑140 (MQ=255)
              gCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTaa                                                                                                                         >  2:6597727/1‑140 (MQ=255)
                 cgccgcTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTCGTTATTAACATTaaaaa                                                                                                                      >  2:9123210/1‑140 (MQ=255)
                  gccgcTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAg                                                                                                                     <  1:1722933/140‑1 (MQ=255)
                  gccgcTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAg                                                                                                                     >  1:9104918/1‑140 (MQ=255)
                              tACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGGTTGCTCCCGGCATCCCGTCCTTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCt                                                                                                         >  2:10802357/1‑140 (MQ=255)
                              tACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCt                                                                                                         >  1:9284043/1‑140 (MQ=255)
                              tACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATACCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCt                                                                                                         >  2:6110533/1‑140 (MQ=255)
                               aCTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCtt                                                                                                        >  2:3435352/1‑140 (MQ=255)
                               aCTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCtt                                                                                                        <  1:10612179/140‑1 (MQ=255)
                                 tGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTc                                                                                                      >  1:2889265/1‑140 (MQ=255)
                                   gCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCgg                                                                                                    >  2:10340206/1‑140 (MQ=255)
                                   gCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCgg                                                                                                    >  2:4753638/1‑140 (MQ=255)
                                    cATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGc                                                                                                   <  2:4559941/140‑1 (MQ=255)
                                     aTCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCt                                                                                                  <  2:6732786/140‑1 (MQ=255)
                                     aTCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCt                                                                                                  >  2:8959438/1‑140 (MQ=255)
                                     aTCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCt                                                                                                  <  1:840618/140‑1 (MQ=255)
                                      tCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTa                                                                                                 >  1:3726435/1‑140 (MQ=255)
                                       ccATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTaa                                                                                                <  1:10211629/140‑1 (MQ=255)
                                        cATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAAc                                                                                               >  2:2822494/1‑140 (MQ=255)
                                        cATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAAGTCACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAAc                                                                                               >  2:8703239/1‑140 (MQ=255)
                                         aTTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACg                                                                                              <  2:9360149/140‑1 (MQ=255)
                                         aTTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACg                                                                                              <  1:109880/140‑1 (MQ=255)
                                         aTTGATCTGTCAGAAGAAACTACAGGAAGCAGCCATGATTGCTCCCGGCATCCCGTCCTTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACAATAAAAAGATGGCTTACGCTTTCGGCTAACg                                                                                              <  1:1512971/140‑1 (MQ=255)
                                          ttGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGt                                                                                             <  1:11291848/140‑1 (MQ=255)
                                             aTCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGt                                                                                          >  1:5675955/1‑140 (MQ=255)
                                                  tCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTg                                                                                     >  1:336704/1‑140 (MQ=255)
                                                  tCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTg                                                                                     >  2:1045469/1‑140 (MQ=255)
                                                  tCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTg                                                                                     >  1:6717693/1‑140 (MQ=255)
                                                  tCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTg                                                                                     >  1:6426760/1‑140 (MQ=255)
                                                       agaaAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTgg                                                                                >  1:2533170/1‑140 (MQ=255)
                                                            gTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCcaat                                                                           >  2:7602067/1‑140 (MQ=255)
                                                            gTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCcaat                                                                           >  1:3144666/1‑140 (MQ=255)
                                                            gTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCAGTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTGGGGTGGCcaat                                                                           >  1:5447440/1‑140 (MQ=255)
                                                                aGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCcaatcaat                                                                       <  2:6717693/140‑1 (MQ=255)
                                                                     gCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCt                                                                  <  1:5896385/140‑1 (MQ=255)
                                                                     gCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCt                                                                  <  1:6607795/140‑1 (MQ=255)
                                                                     gCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCt                                                                  <  1:11108494/140‑1 (MQ=255)
                                                                     gCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCt                                                                  <  1:2118009/140‑1 (MQ=255)
                                                                       aGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAattaacta                                                                                                                                       >  2:4179790/1‑69 (MQ=255)
                                                                         aCATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCAACTTTATTTAACTAGATATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAgt                                                              >  2:7898781/1‑140 (MQ=255)
                                                                             gATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTCACTAGTTATTAACATTAAAAAGATGGCTTACGCTGTCGGCTAACGTTGTCGTTGGGTGGCCACTCAATTTGCTAAGTGttt                                                          >  2:11151836/1‑140 (MQ=255)
                                                                              aTTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTCAGTGtttt                                                         >  1:87854/1‑140 (MQ=255)
                                                                                tGCTCCCGGCATCCCGTCATTATCAGAGATGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGc                                                       <  2:5356550/140‑1 (MQ=255)
                                                                                tGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGc                                                       <  1:3519213/140‑1 (MQ=255)
                                                                                tGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGc                                                       <  1:8062088/140‑1 (MQ=255)
                                                                                tGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGc                                                       >  1:8318770/1‑140 (MQ=255)
                                                                                tGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAAATAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGc                                                       <  1:8211709/140‑1 (MQ=255)
                                                                                  cTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACAGTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAAACAATTTGCTAAGTGTTTTGCTg                                                     <  2:1495282/140‑1 (MQ=255)
                                                                                     ccGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGtca                                                  <  1:4753638/140‑1 (MQ=255)
                                                                                     ccGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACAATAAAAAGATGGCCTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGtca                                                  <  2:4929279/140‑1 (MQ=255)
                                                                                       ggCATCCCGTCATTATCCGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACAATAAAAAGATTGCTTACGCTTTCGGCTAACGGTTTCGTTGGGTGGCCATTCCAGTTGCTTAGTGTGTGGCTGgcatg                                                >  2:6379012/1‑139 (MQ=255)
                                                                                             ccGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAg                                          >  2:2072447/1‑140 (MQ=255)
                                                                                              cGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGa                                         <  1:9877386/140‑1 (MQ=255)
                                                                                               gTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATGAACATTAAAAAGATGGATTACGCTTTCGTCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAACCAGAc                                        <  2:6979084/140‑1 (MQ=255)
                                                                                                tCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGAcc                                       >  1:10706923/1‑140 (MQ=255)
                                                                                                  aTTATCAGATAGGATGCGGGAGGATGCCAATTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGc                                     <  2:7371581/140‑1 (MQ=255)
                                                                                                          agagGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAg                                                                                                                     <  2:11447552/52‑1 (MQ=255)
                                                                                                          agagGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGAt                             >  1:6183507/1‑140 (MQ=255)
                                                                                                          agagGATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGAt                             <  1:6812400/140‑1 (MQ=255)
                                                                                                              gctGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCATTCGGCTAACGTTGTCGTTGGGTGGCCAATCACTTTGCTAAGTGTTGTGCTGTCATCAAACAGACCGCCTTTCGATgcgc                         >  2:5568916/3‑140 (MQ=255)
                                                                                                              gATGCGGGNGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGNTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATgcgc                         >  1:6128175/1‑140 (MQ=255)
                                                                                                              gATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTTCTGTCATCAAACAGACCGCCTGTCGATgcgc                         >  2:2899394/1‑140 (MQ=255)
                                                                                                              gATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATgcgc                         >  1:1032802/1‑140 (MQ=255)
                                                                                                              gATGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATgcgc                         >  1:10460462/1‑140 (MQ=255)
                                                                                                               attcGGGAGGATGCCACGTTACTGAACTAGTTATTAACATTCCAAAGATGGCTTACGCTTTCGGCTAACGTTGACGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCACACAGACCGCCTTTCGATGCGcc                        <  2:2105808/137‑1 (MQ=255)
                                                                                                               aTGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGcc                        <  1:2242252/140‑1 (MQ=255)
                                                                                                                tGCGGGAGGATGCCACTTTAATTAACTCGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCGGTCATCAAACAGACCGCCTTTCGATGCGCCa                       >  1:3485913/1‑140 (MQ=255)
                                                                                                                tGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCa                       >  2:3756420/1‑140 (MQ=255)
                                                                                                                tGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCa                       >  1:7535947/1‑140 (MQ=255)
                                                                                                                tGCGGGAGGATGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCa                       >  1:4521011/1‑140 (MQ=255)
                                                                                                                    ggaggaTGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGt                   <  2:39780/140‑1 (MQ=255)
                                                                                                                    ggaggaTGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTGTCGATGCGCCAACgg                   >  1:8924958/1‑139 (MQ=255)
                                                                                                                        gaTGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGa               >  2:257431/1‑140 (MQ=255)
                                                                                                                        gaTGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGa               >  1:9581274/1‑140 (MQ=255)
                                                                                                                        gaTGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGa               >  2:10040894/1‑140 (MQ=255)
                                                                                                                         aTGCCACTTTAATTAACTAGTGATTTACATTAAAAAGATGGCTTACTATTTCGGCTAACGTTGTAGTTGGGTGTACAATCAATTTGCTAAGTGTTTTTCTGTCATCAAAAATACCGCCTTTAGATGCGCCAACGTCAGaa              <  2:1731943/140‑1 (MQ=255)
                                                                                                                          tGCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGtc                                                   <  2:8357616/102‑1 (MQ=255)
                                                                                                                           gCCACTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATc            >  1:10851752/1‑140 (MQ=255)
                                                                                                                              aCTTTAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATCCGc         <  1:1162299/140‑1 (MQ=255)
                                                                                                                                tttAATTAACTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATCCGCCa       <  2:9315454/140‑1 (MQ=255)
                                                                                                                                attaattaaCTAGTGATTAACATTAAAAAGAGGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCACTCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATCCGCCa       <  1:7307177/139‑1 (MQ=255)
                                                                                                                                  taattaacTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGc     <  2:5061976/140‑1 (MQ=255)
                                                                                                                                    attaactaGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCat   >  1:7170865/1‑140 (MQ=255)
                                                                                                                                    attaactaGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGGGTTTTGCTGTCCTCAAACAGTCCGCCTTTCGATGCGCCAACGTCAGAATCCGCAAGCat   >  1:2367343/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                       
TAACAGGGCGTACAGCACGCCGCTAATCATTACTGGCATCCATTGATCTGTCAGAAGAAAGTTCAGGAAGCAGACATGATTGCTCCCGGCATCCCGTCATTATCAGAGAGGATGCGGGAGGATGCCACTTTAATTAATTAGTTATTAACATTAAAAAGATGGCTTACGCTTTCGGCTAACGTTGTCGTTGGGTGGCCAATCAATTTGCTAAGTGTTTTGCTGTCATCAAACAGACCGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATA  >  NZ_CP025268/4434952‑4435224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: