| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,075,379 | +G | intergenic (+21/+234) | ymdF → / ← rutG | general stress protein/pyrimidine utilization transport protein G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,075,379 | 1 | . | G | 99.6% | 910.8 / ‑3.6 | 263 | intergenic (+21/+234) | ymdF/rutG | general stress protein/pyrimidine utilization transport protein G |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (108/154); total (108/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 274 total aligned reads displayed.
CAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATGACGAAT‑CA‑TTTTTG‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTG > NZ_CP025268/1075240‑1075510 | cAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCCAGAATGACCCGCAGGGCGCATCTGAAGCAGGTAATTATGGTGGTAAGGGCAGTCACGGCAAAAGCGACACCTAGCCGGGCTAATCAAGGACGAAt > 2:6095638/1‑140 (MQ=255)cAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAAt < 2:2713551/140‑1 (MQ=255) aaGCAGGTACAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGACTGACCCGCAGCGCGCATCTGAATCAGGTAAAAAAGGTGGTAAGACCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAAtgca < 2:1315753/140‑4 (MQ=255) gCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAAtgcatt > 2:6352676/1‑135 (MQ=255) cAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCCCGAAGGACCCGCAGCGCGCATCTTCAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATCACGAAtgcataa < 2:1223960/140‑7 (MQ=255) cAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑ttt < 1:3090813/140‑1 (MQ=255) cAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑ttt < 1:311923/140‑1 (MQ=255) cAGGTAAAAAAGGAGGACAGCACAGCGGGGGTAATTTCAAGAAGGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGACACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑ttt < 2:3268908/140‑1 (MQ=255) gTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTg > 2:5223144/1‑140 (MQ=255) gTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCt < 1:6340817/140‑1 (MQ=255) tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTc > 1:1529654/1‑140 (MQ=255) tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTc > 2:1455551/1‑140 (MQ=255) tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTc > 1:1008226/1‑140 (MQ=255) tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTc > 1:1164501/1‑140 (MQ=255) acagcacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAATGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTc > 2:2471457/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCCGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTCGCTCGTCaaaa > 2:1950995/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGTAGCAGGTAAAATTGGTGGTTAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTATTCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCaaaa > 2:3770958/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAATGGTGGTAAGAGCAGTCACGGCACAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCaaaa > 2:6248249/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAATGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCaaaa > 2:2896697/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCaaaa > 2:260339/1‑140 (MQ=255) agcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGc > 2:3627164/1‑140 (MQ=255) cGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCa > 1:4165843/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:2682054/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCAcc > 2:4201053/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:376897/1‑140 (MQ=255) aaTTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCAccgc < 1:3595378/140‑1 (MQ=255) ttCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCgg > 2:2222083/1‑140 (MQ=255) ttCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCgg > 2:1680425/1‑140 (MQ=255) ttCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCgg > 1:2291606/1‑140 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGCGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:5936694/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAACAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:2307610/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:877109/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:1129684/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:192469/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:5323899/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:2118237/140‑1 (MQ=255) tGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGATAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCgg < 2:2325266/140‑1 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 2:2790454/1‑140 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 2:3239571/1‑140 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGACGGGCTCATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 2:6136288/1‑140 (MQ=255) ccGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtggt < 1:3028099/140‑1 (MQ=255) ccGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtggt < 1:2865496/140‑1 (MQ=255) gcgcgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAAGCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATa < 2:5277122/140‑1 (MQ=255) cgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtg > 1:4953837/1‑140 (MQ=255) cgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtg > 1:6446229/1‑140 (MQ=255) aTCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatg > 2:653515/1‑140 (MQ=255) aTCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatg < 1:1294443/140‑1 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 1:2630805/140‑1 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 2:5290582/140‑1 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 2:2509659/140‑1 (MQ=255) cTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGAc < 1:5188652/140‑1 (MQ=255) aGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCTGTTACCCGGTGGTTGATACTGATGACAAATGTa < 1:3351184/140‑1 (MQ=255) aGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTa < 1:39962/140‑1 (MQ=255) aGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTa < 1:1425207/140‑1 (MQ=255) aGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTa < 2:4999470/140‑1 (MQ=255) ggTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTaa > 1:4773271/1‑140 (MQ=255) ggTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGAGGTTGATACTGATGACAAATGTaa > 1:2793941/1‑140 (MQ=255) gTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAg < 1:1680425/140‑1 (MQ=255) aaaaGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTg > 2:2551822/1‑140 (MQ=255) aGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCt < 1:6061987/140‑1 (MQ=255) ggtggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTg < 1:1058509/140‑1 (MQ=255) ggtggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTg < 1:3280401/140‑1 (MQ=255) gtggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGa < 2:3359921/112‑1 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:5757796/1‑140 (MQ=255) ggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc > 2:2884644/1‑100 (MQ=255) ggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATg > 2:3511896/1‑140 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:3665470/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:4422926/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:5589723/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:5885394/140‑1 (MQ=255) agagCAGTCACGGCAAAGGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTATGTCTGTAGCTCGTCAAAAAGCCATCACCGCGGGTTAGCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGcgcg > 2:5531459/1‑140 (MQ=255) agagCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGcgcg < 1:4608948/140‑1 (MQ=255) agCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGAt < 1:3387368/140‑1 (MQ=255) gCAGTCACGGCAAAAGCGACAACTAGCCNGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATg < 1:5671167/140‑1 (MQ=255) gCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATg < 1:5926655/140‑1 (MQ=255) taaCGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa < 2:1002719/138‑1 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 1:2907149/1‑140 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 1:2303671/1‑140 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa < 1:4507944/140‑1 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa < 1:425630/140‑1 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 2:164705/1‑140 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 1:5118791/1‑140 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 2:588554/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg > 2:5142108/1‑140 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg > 2:928552/1‑140 (MQ=255) aGCGACAACTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACACATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTAc > 2:2567440/1‑140 (MQ=255) aCTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCagaaga < 1:620375/140‑1 (MQ=255) aCTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCagaaga < 1:2479980/140‑1 (MQ=255) aCTAGCCGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCagaaga < 1:1989462/140‑1 (MQ=255) tagccGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGAtt < 1:3569882/137‑1 (MQ=255) ccGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:4778461/140‑1 (MQ=255) ccGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:5575936/140‑1 (MQ=255) ccGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:1779184/140‑1 (MQ=255) ccGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTGACCCGGTGGATGATTCTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:4290901/140‑1 (MQ=255) ccGGGCTAATCAAGGACGACTGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGCTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTAGCAGGCCTACCAGAAGATTGCa < 2:3861768/140‑1 (MQ=255) cGGGCTAATCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGTAGATTGCaa < 2:3020186/140‑1 (MQ=255) aaTCAATGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATAtt > 1:1380577/1‑140 (MQ=255) aaTGACGAATGCATTTTTTT‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCACTATATTGAAt < 2:297455/140‑1 (MQ=255) tGACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAAttt > 2:3954704/1‑140 (MQ=255) gACGAATGCA‑TTTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTg > 1:800287/1‑140 (MQ=255) | CAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATGACGAAT‑CA‑TTTTTG‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTG > NZ_CP025268/1075240‑1075510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |