| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,374,862 | (T)8→9 | intergenic (+40/‑172) | pspE → / → ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,374,854 | 1 | . | T | 95.3% | 939.4 / 38.1 | 304 | intergenic (+32/‑180) | pspE/ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Reads supporting (aligned to +/- strand): ref base . (8/6); new base T (150/133); total (158/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.24e-01 | |||||||||||
Only 100 of 324 total aligned reads displayed.
GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTG > NZ_CP025268/1374716‑1374987 | gACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑t > 1:5471590/1‑140 (MQ=255)gACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑t > 1:1160782/1‑140 (MQ=255)gACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑t > 2:2090283/1‑140 (MQ=255) gTCAGGGCCAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGAGGCCTGTAAGAGCTCGCAATGCCGCCGGTCTACGGGTAACAGACTTCTCCAGGGGCGGCGCTGATGCGCC‑‑G‑‑ttg‑tt‑tt‑t > 2:5945252/1‑140 (MQ=255) gTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑ttt‑tt‑tt‑t < 2:5534501/140‑1 (MQ=255) gTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑ttt‑tt‑tt‑t > 1:562973/1‑140 (MQ=255) gTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑ttt‑tt‑tt‑t < 1:6250196/140‑1 (MQ=255) tCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑ttt‑tt‑tt‑tt < 2:2287423/140‑2 (MQ=255) ggCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑ttt‑tt‑tt‑ttctgt > 1:1495727/1‑135 (MQ=255) gcaagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTc < 2:713495/140‑1 (MQ=255) gcaagcaaAAGAGATCCTTAGCGAGATGGGATAGACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTc < 1:2705266/140‑1 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCCCCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTca < 2:6414045/140‑1 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTca < 1:3106240/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTcac < 2:78206/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTcac < 1:4150223/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTcac < 2:1428150/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTcac < 2:3562849/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTcac < 1:1956723/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTcac < 2:5109483/140‑1 (MQ=255) gcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCacac > 2:5349632/1‑140 (MQ=255) gcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCacac > 1:806351/1‑140 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACAcc > 2:312174/1‑140 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACAcc < 1:3062525/140‑1 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACAcc < 1:3481531/140‑1 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACAcc < 1:3957671/140‑1 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACAcc < 1:5895494/140‑1 (MQ=255) gaaccTTCGCGAGATGGGCAATACCCACGATGACCACGCCGTAGGCCTGAACGACATCGCCATCCCGAAGGAAAAAGGTAAACAGAATACACCAGCACCGGCGCGTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTa < 2:4399406/137‑1 (MQ=255) gaTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTa < 1:2615159/140‑1 (MQ=255) gaTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTa < 2:546156/140‑1 (MQ=255) tCCTTAGCGAGTTGGGTTATACCCACGTTGAGAACGCCGGTGGCATGAAAGACATCGAAATGCCGAAGGTCAAATGTTACAAGAATTCACCATGAGAGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTGACACGTTTTTTTCa < 2:1876375/140‑1 (MQ=255) tCCTTAGCGAGATGGGATCTACCCACGTTGAGAACGCCGGTGGCCTGAAAGACCTCGCAATGCCGACGGTCAAAGGTTAAAAGAATTCCCCCTGACCGGCGCTTATGCGCC‑‑G‑‑TTT‑TTATT‑TCTGTCACCCCTTATTTACa < 2:1158266/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACa < 1:1101271/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACa < 2:2369685/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACa < 2:2988703/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GA‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACa < 2:667195/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGAGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACa < 2:4171158/140‑1 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GTTTTT‑TT‑TT‑TCTGTCACACCTTATTTACa < 2:1534715/140‑1 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GTTTTT‑TT‑TT‑TCTGTCACACCTTATTTACa < 1:4552044/140‑1 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTTTCACACCATATTTaaaa > 1:2953832/1‑137 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTTTTTACAt > 2:2194166/1‑140 (MQ=255) tAGCGAGATGGGATATACCCACGGTGAGAACGCCGGTGGCCGGAAAGACATCGCAATGCCGACGGTCAATGGTTAAAAGAATTCTCCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATccc > 2:4548819/1‑140 (MQ=255) aGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GTTTTT‑TT‑TT‑TCTGTCACACCTTATTTACATccc > 2:4701475/1‑140 (MQ=255) aGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCATATTTAAAAcccc > 1:3818854/1‑140 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCa < 2:5199965/140‑1 (MQ=255) agaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GTTTTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATa < 1:4756771/140‑1 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGa > 2:2493012/1‑140 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGa < 2:5438939/140‑1 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGat > 2:3223495/1‑140 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACAATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGat > 2:4007233/1‑140 (MQ=255) gggATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TATTTCACACCTTATTTACATCCCCATAGatta > 2:3995366/1‑140 (MQ=255) ccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCa > 2:1334176/1‑140 (MQ=255) ccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCa > 1:2655546/1‑140 (MQ=255) aCGGTGAGAACGCCGGTGGCCTGAAAGACAGCGCAATGCCGAAGGTCAAAGGTGAACAGAAATCACCATGAGCGGCGCTTCTGCGCC‑‑G‑‑TTTGGT‑TT‑TCTGTCTCACCTGATGTGCTGCCCAGTAGATTAGTTGCGTCAGc > 2:3811986/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGTGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:2769116/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTTTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:168533/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:5817200/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:558702/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 2:6121626/1‑140 (MQ=255) gTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTG‑‑TTT‑TT‑TT‑TCTGTGACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:6030240/1‑140 (MQ=255) gTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTc < 2:1806635/140‑1 (MQ=255) gagaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTAAATACCCATATATTATTTTCGTCAGCTcaca > 1:1695252/1‑140 (MQ=255) gagaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCGTATTTACATCCCCATAGATTATTTGCGTCAGCTcaca > 1:2080695/1‑140 (MQ=255) agaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTGACACCGTATTTACATCCCCAAAGTTTATTTTCGTCAGCTCACaa > 1:3893973/1‑140 (MQ=255) aaCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATGATTTGCGTCAGCTCACAAAt > 2:6016048/1‑140 (MQ=255) aCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGACAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCTTCAGCTCACAAATa < 2:2582538/140‑1 (MQ=255) cGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATAc > 2:4108339/1‑140 (MQ=255) gCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTGACACCTTATTTTCATACCCATATTTTATTTTCGTCAGCTCACAAATACg > 1:3414633/1‑140 (MQ=255) gCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TATGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACCAATACg > 1:4255174/1‑140 (MQ=255) ccGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACACATACGc > 2:4272827/1‑140 (MQ=255) ccGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGc > 1:6387611/1‑140 (MQ=255) gggCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGTGCGGCGCTGAGGCGCC‑‑G‑‑TTT‑TT‑TTGTCTGGCCCAGGTTATTTGGAGGCCCATAGTGTATTTGCGTCCGCTCACCAATTCGCtgtt > 2:3363812/2‑140 (MQ=255) gCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTCAAAGAATTCACCATGAGCGGCGCGTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTc > 2:371434/1‑140 (MQ=255) gCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTc > 1:5308384/1‑140 (MQ=255) ccTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTcc < 1:2238320/140‑1 (MQ=255) aaGACATCGCAAGGCCGAAGGTCAAAGGTTAAAAGAATTCACCAGGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGt < 2:1500727/140‑1 (MQ=255) cATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GTTTTT‑TT‑TT‑TATTTCACACATTATTTAAATCCCCAAAGTTAATTTGGGTCCGGTCAAAAAAACGATTTTTCCCTggggat > 2:3606633/1‑136 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TATGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaa > 2:1016714/1‑140 (MQ=255) tCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaaa > 1:4658632/1‑140 (MQ=255) cGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TTTTTCACACCTTATTTAAATCCCCAAAGATTATTTGCGTCAGCTCACAAATACGCTTTTTACCGGGTAAAAAAt > 1:4986781/1‑140 (MQ=255) cGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAAt > 1:920575/1‑140 (MQ=255) gCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATg < 1:3181806/140‑1 (MQ=255) aTGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGAtt < 1:4849339/140‑1 (MQ=255) ccGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATATATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGttttac > 1:554596/1‑138 (MQ=255) aaGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TATGTGACACCTTATTTTAATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATTATTTACTGc > 1:219343/1‑140 (MQ=255) aGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 2:5149294/140‑1 (MQ=255) ggTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGt < 2:1602698/140‑1 (MQ=255) cAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GTTTTT‑TT‑TT‑TCTGTCACACCTTATTTACAACCCCAAAGATTATTTTCGTCAGCTCACAAATAACCTTTTTACCAGGTAAAAAATGATTTACTGCGTGa > 1:6101947/1‑140 (MQ=255) gTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTaaaa < 1:5197172/140‑1 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTAAAACCATATTTAAAAACCCAAAGATTATTTGCGTCAGCGCAAAAATAAGCATTTTACCTTGGAAAAAATTATTTCCAGGGTGACTAAAAccc > 1:68054/1‑140 (MQ=255) ttCACCCTGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACACATACGCTTTTTCCCTGGTAAACAATGATTTCCTGCGTGACTAAAACCCTTGTGcg > 2:6272884/1‑139 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTAAATCCCCCTAGATTATTTGCGGCAGCTAACAAATACGCTTTTTCCCTGGTAAAAAATGATTTACTGCGGGACTAAAACCCTTGTGCt > 1:1484868/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCGTATTTAAATACCCCAAGATTATTTTCGTCACCCCACAAAAAAGCTTTTTACCAGGTAAAAAATTATTTACAGCGTGGCAAAAAaccagttgct > 1:1910697/1‑133 (MQ=255) aTGAGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTg < 1:1002789/140‑1 (MQ=255) aGCGGCGCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCAAAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCGTGTGCTCAATTGACa > 2:366692/1‑140 (MQ=255) gcggcgCTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TATGTCACACCTTATTTAAATACCCATAGATTATTTTCGTAAGCTCACAAATACGCTTTTTACCTGGTAAAAAAAGATTTACATCGTGACTAAAAACCAAGTGCTAAATTGTCAg > 1:5217112/1‑140 (MQ=255) gcgcTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCAGTCACACCGTATTTACATACCCATAGATTAATTGCGTAAGCTCACAAAAACGCTTTTTACCTGGTAAAAAATGATTTCCTGCGTGACTAAAAACCTTGTGCGCAATTGAAAGttt > 1:3442376/1‑140 (MQ=255) gcTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTTGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTTACAGTTTAt > 2:2876093/1‑140 (MQ=255) cTTATGCGCC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCAGAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTAtt < 2:4921729/140‑1 (MQ=255) aTGCGCC‑‑GT‑TTT‑TT‑TT‑TATGTCACACCTTATTTAAATACCCATAGATTATTTTCGTCAGCTCACAAATACGCTTTTTACCAGGTAAAAAATGATTTCCAGCGTGACTAAAACCCATGTGCTCAAATTAAAGTTTAtttta > 1:3520867/1‑139 (MQ=255) gcgcC‑‑GT‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 1:2293333/140‑1 (MQ=255) | GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑‑G‑‑TTT‑TT‑TT‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTG > NZ_CP025268/1374716‑1374987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |