| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,629,176 | (T)7→8 | pseudogene (141/392 nt) | ydeI ← | YdeI family stress tolerance OB fold protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,629,169 | 1 | . | T | 97.7% | 833.2 / 8.4 | 220 | pseudogene (148/392 nt) | ydeI | YdeI family stress tolerance OB fold protein |
| Reads supporting (aligned to +/- strand): ref base . (0/5); new base T (58/157); total (58/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 234 total aligned reads displayed.
GCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑TTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAA > NZ_CP025268/1629034‑1629300 | gCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑tttt > 2:3750334/1‑140 (MQ=255) ccGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑ttttt > 1:1506075/1‑140 (MQ=255) cAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑tttttt‑tt < 2:4783282/140‑2 (MQ=255) gtaaTAAAGACATTAATTTCACCTCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTTAGAAATCAAATTACCGCGTATTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑tttttt‑ttgc < 2:5081604/138‑4 (MQ=255) ggAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑tttttt‑ttgc < 1:2727634/140‑4 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGcatcat < 1:3100209/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGcatcat < 2:1537734/140‑1 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGcatcat > 2:2232392/1‑140 (MQ=255) gACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCgg > 2:2033625/1‑140 (MQ=255) gACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCgg < 2:4823478/140‑1 (MQ=255) ccATTAATGTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCATTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGt < 1:5995671/139‑1 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTc > 1:3283123/1‑140 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTc > 2:1640266/1‑140 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTc > 2:2754220/1‑140 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTc > 1:4784400/1‑140 (MQ=255) tAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCcg < 1:5806684/140‑1 (MQ=255) tAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCcg > 1:905406/1‑140 (MQ=255) tttCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGa < 2:4130126/140‑1 (MQ=255) tttCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGa < 2:817042/140‑1 (MQ=255) tttCACCGCTCTTATCGCGAAAAACGTAACGGGCCTCTCCTGTGTGAGAACTCAAATTACCGCGTAGTGAAACCGACGCGCCCTCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGa < 2:5858411/140‑1 (MQ=255) ttCACCGCTCTTATCGCGAAAAACGTAACGGGCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGAt < 1:2368580/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAg < 2:3113762/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAg < 1:1608465/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCGCCTTTGTGAGAAATCAAATTACCGCGTAGAGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAg < 2:5364113/140‑1 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGc > 1:6315076/1‑140 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGc > 1:5603896/1‑140 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGc > 2:5505948/1‑140 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGc > 1:4565743/1‑140 (MQ=255) ccGCTCTTATCGCGAAAACCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGcc < 2:6411484/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGcc < 2:5603896/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGcc < 2:3162700/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGcc < 1:3003609/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAAGTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGcc < 1:3932976/140‑1 (MQ=255) cGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCa > 1:2151773/1‑140 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCAtc < 1:2051018/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATGACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCAtc < 1:1138572/140‑1 (MQ=255) tctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCAtct > 1:266488/1‑140 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTa < 1:696966/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:5521490/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:20713/140‑1 (MQ=255) aaaaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCAt > 1:4505364/1‑140 (MQ=255) aaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGa < 2:4050260/140‑1 (MQ=255) cGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggc < 2:4716991/140‑1 (MQ=255) cGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggc < 2:1875056/140‑1 (MQ=255) aaCGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggcggc > 1:3671639/1‑140 (MQ=255) aaCGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggcggc < 2:216201/140‑1 (MQ=255) aCGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGgcggcg > 1:2793620/1‑140 (MQ=255) cGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGcggcgg < 1:2242262/140‑1 (MQ=255) gTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTg < 2:5479505/140‑1 (MQ=255) gTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTg < 1:3993541/140‑1 (MQ=255) ctcCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCAtc < 2:1350105/112‑1 (MQ=255) ctcCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCt < 1:4111346/140‑1 (MQ=255) ctcCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCt < 1:4859962/140‑1 (MQ=255) cTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCa < 1:6261992/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:6353993/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:3506374/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:2000124/140‑1 (MQ=255) aaTCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTa > 2:4275049/1‑140 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa < 1:5911793/140‑1 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa < 1:176439/140‑1 (MQ=255) cAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAAc < 2:3942297/140‑1 (MQ=255) cAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAAc < 2:2584436/140‑1 (MQ=255) aaTTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCg < 1:1082913/140‑1 (MQ=255) tACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGccc < 1:2975642/140‑1 (MQ=255) aCCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCt < 1:1810631/140‑1 (MQ=255) cgcgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTgg < 2:2581373/140‑1 (MQ=255) cgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑TTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCa < 2:3779329/140‑1 (MQ=255) gtcgTGACACCGCAGCGCCAGCGTGCACGGTTTTGGCGAAAGCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTACACCGCCCTGGTCa < 2:6074165/137‑1 (MQ=255) gTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCa < 1:3322502/140‑1 (MQ=255) gTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCa < 1:1372526/140‑1 (MQ=255) gTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCa < 1:405797/140‑1 (MQ=255) tAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCAt < 1:90341/140‑1 (MQ=255) gAAACCGAAGCGCCCTCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGc < 2:1111539/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 2:3492773/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:1304033/140‑1 (MQ=255) aaaCCGAAGCGACATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTTCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 2:2460902/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 2:2450275/140‑1 (MQ=255) cGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACg > 2:5996778/1‑140 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa < 2:2409022/140‑1 (MQ=255) aGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCAt < 2:3711052/140‑1 (MQ=255) ccATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAgg < 1:465803/140‑1 (MQ=255) aTCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCa > 2:731608/1‑140 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 2:905910/140‑1 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 2:2321694/140‑1 (MQ=255) tCGTGCAGGGTTTTTGCGAAATCAACGGTCA‑TTTTTTGTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 2:3254174/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:2246667/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:5556182/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:5292924/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:4726000/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:25278/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:2857465/140‑1 (MQ=255) tttttGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:364290/140‑1 (MQ=255) tttGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACt < 1:5105875/140‑1 (MQ=255) tttGCGAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACt < 2:2643024/140‑1 (MQ=255) atGCGAAAACAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGTCGCAGCATCCTGATTTAAACCGCCCTGGTCATCTTCCAACGCATAAGGCATGACACGAAAACtt > 2:174537/2‑140 (MQ=255) gAAATCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTa < 2:4661764/140‑1 (MQ=255) aTCAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCACAAGGCATGACAAGAAAACTTGCTAATa > 1:6059129/1‑140 (MQ=255) cAACGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACa < 1:2600160/140‑1 (MQ=255) aaCGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACaa < 1:3618382/140‑1 (MQ=255) aaCGGTCATTTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACaa < 1:1758273/140‑1 (MQ=255) | GCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑TTTTTT‑TGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAA > NZ_CP025268/1629034‑1629300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |