| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,773,671 | (C)5→6 | intergenic (+161/‑55) | yfjQ → / → yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,773,666 | 1 | . | C | 95.4% | 1378.1 / 55.9 | 433 | intergenic (+156/‑60) | yfjQ/yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (20/0); new base C (265/148); total (285/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.48e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 485 total aligned reads displayed.
CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑C‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 | tgttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTGATAGCTTTTATCCCCCGTTACATCTGGGTTTTGCGGAAATAATATATCGTTTCTGCGTTGTCGATACGCTGTCC‑gggc > 2:3265123/1‑137 (MQ=37) gttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCTGTTATAGCTTTTAACCCACGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑ccc < 2:3941875/140‑1 (MQ=255) gttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑ccc < 1:3308540/140‑1 (MQ=255) ttACTATCGGACACCACCGGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑cccc < 2:4683693/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCTCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑cccc < 1:4030446/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑cccc < 1:1323486/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑cccc < 1:1006501/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑cccc < 1:5391491/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑cccc < 1:4515697/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑cccc < 1:4281890/140‑1 (MQ=255) tatCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑ccccctct < 1:1244279/140‑5 (MQ=255) gatCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCCTACCCTGTCC‑G‑c‑ccccctct < 1:5840931/139‑5 (MQ=255) gACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTGTTAACCCCCGTTACATCTGGCTGTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGG‑C‑CCCc‑tcggggat > 1:3796053/1‑134 (MQ=37) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTTGCCCCCGTTACATCTGGCTTTTGCAGAAATAATTTGTAGTTTCGGCGGTGTCCTTAGCCTGTCC‑GCC‑CCCC‑TCTTTATAg > 2:2719217/1‑140 (MQ=25) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTGATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAg > 1:2983693/1‑140 (MQ=255) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCAGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGAAGAAATAAATGATCGTTTATGCGTTGTCCAACCCCTGTCC‑GCC‑CCCC‑TCTTTaacg > 1:5874921/1‑138 (MQ=37) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTTACCCCCGTTACATCTGGCTTTTGCAGTAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTGAAGTAAt > 1:4707460/1‑140 (MQ=255) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTAGATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAAt < 2:2498450/140‑1 (MQ=255) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAAt < 2:2176653/140‑1 (MQ=255) tCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCAcatc > 2:4298090/1‑140 (MQ=255) tCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCGTTATTGTAATCAcatc > 2:439300/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAATAATTAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCAttt > 2:5019506/1‑140 (MQ=255) cGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTATTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑GCTTTAAAGTAATCACATCATTTtca < 2:1938779/140‑1 (MQ=255) tATGTGGTCGTGTGCCTCAATCCCCCGGTTTTAGCTTTTAACCCCCGTTACATCTGGCTTTTGCTGTAATAAAAAAGAGTTTCTGCGTTGGGCCTACCGTGGCC‑G‑CGCGCC‑TGTGTACAGGACTCGGATCATTGtcagtc > 2:2547571/1‑140 (MQ=255) tgCTCGTGTGCCTCAATCCCCCGGTGATAGCTTTTAACCCCCGGTACATCTGGCGTTTGCAGAAATAAAAAATAGTTGCTGCGTTGTCCATACCCTGTCC‑G‑C‑CCCCGGCGTGAAAGTAATCCCATCCGTGtcagtccggt > 2:5661656/1‑136 (MQ=255) gCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑GCTTTAAAGTAATCACATCATTTTCAGTCAGTTa > 2:5525549/1‑140 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:1614194/140‑1 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:4417596/140‑1 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGATTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:1887737/140‑1 (MQ=255) tCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAAACCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTATTCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTACTCACATCATTTTCAGTCAGGTAAc > 1:502726/1‑140 (MQ=21) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTCAAGTAATCACATCATTTTCAGTCAGTTAACtt > 1:2333432/1‑140 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACtt < 1:532380/140‑1 (MQ=255) gtgtGCCTCAATCCCCCGGTGATAGCGTTTAACCCCCGTTACATCTGGCTTTGGAAGAAATCAATAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCGTTGAAGTAATCACATCATTTTCAGTCAGTTAACtt > 2:2383727/1‑140 (MQ=18) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCGTTTGCAGTAATAAATTATAGTTTCTGCGTTGTCCTTACCCTGTCC‑G‑C‑CCCCAGCTTTAAAGTAAGCACATCCTTTTCAGTCTGTTAACtggcc > 2:608169/1‑136 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAATTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑GCTTTAAAGTAATCACTTCATTTTCAGTCAGTTAACTTTCCTg > 2:1665160/1‑140 (MQ=18) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTg > 1:6389731/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCGTTAAAGGAATCACATCATTTTCAGTCCGTTACCTTTCCTg > 2:4783470/1‑140 (MQ=18) ccTCAATCACCCGGTTATAGCGTTTAACCCCCGTTACATCTGGGGTTTGCAGAAATAAATTATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑GCTTTCGAGGACTCACATCCGTGTCAGTACGTTAACtgtgcgg > 2:5305691/1‑134 (MQ=255) cTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTgg < 2:420616/140‑1 (MQ=255) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTGTCCTGGAGaa < 1:3666997/140‑1 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 1:278866/140‑1 (MQ=255) cccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc < 2:601831/140‑1 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTTCGATGTCCAAACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGAAATCACATCATTTTCAGTCAGAAAAAATTCCTGGATAAtctctc > 2:6403508/1‑140 (MQ=18) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 1:4062721/140‑1 (MQ=255) gTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCGTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCGGGAGAATCTCTCag > 2:4134634/1‑139 (MQ=255) tataGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGa < 1:1806447/140‑1 (MQ=255) ataGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGac < 1:2544186/140‑1 (MQ=255) ataGATTTTAACCCACGTTACATCTTGCTTTTGCATAAATAAAAAATAGTTTCTGAGTTGTCCATACCATGTCC‑G‑CACCCC‑TCTTTATAGTAAGCACATCTTTTTCAGTCAGTTAAATTTCCTGGAGAATCTCTAATTac > 2:944923/1‑140 (MQ=255) agaGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCGTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGac < 2:1171557/138‑1 (MQ=255) tttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGc > 1:4184986/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCa > 1:481409/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:467107/1‑140 (MQ=255) cccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAc < 1:1935244/140‑1 (MQ=255) ccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgcc > 2:1442774/1‑140 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg > 2:4512562/1‑140 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg > 2:2339406/1‑140 (MQ=255) tGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCg > 2:83774/1‑140 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCgg > 1:3519607/1‑140 (MQ=255) gCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggc > 2:4572475/1‑140 (MQ=255) gCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggc > 1:2407245/1‑140 (MQ=255) gCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggc < 1:2159698/140‑1 (MQ=255) cTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggct < 2:4941981/140‑1 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 1:6138747/140‑1 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTGTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 2:1880825/140‑1 (MQ=255) aaTAAAAAATAGTGTCTGCGTAGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTGACACTACTCACATCATTGTCAGTCAGTTAACTGTACTGGACAATCTCTCATGACACCGTCCGAACGCCGCCCTGACCGTCTggctgtcagg < 2:2940857/140‑1 (MQ=255) tAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggct < 1:5591134/140‑1 (MQ=255) aaaaaTAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 1:783633/140‑1 (MQ=255) aaaaaTAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 2:2634850/140‑1 (MQ=255) catcgTTCCTGCGTTGTCCCTCCCCTGTCC‑GCC‑CCCC‑TCTTGCAAGTAATCACAACATTGACACTCCGGTCACCTTCCTGCACCATCTATCACGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCTGGATGTCAc < 2:3443626/136‑1 (MQ=9) aaTAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCGGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 2:1766055/140‑1 (MQ=255) aaTAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 2:5136457/140‑1 (MQ=255) tCTGCGTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAAt < 1:2709257/140‑1 (MQ=255) gTTGTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGcc < 1:4869239/140‑1 (MQ=255) gTCCATACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTc > 2:1018407/1‑140 (MQ=255) aTACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGt < 1:6284543/140‑1 (MQ=255) tACCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCGGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCTGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGtt < 2:5207835/140‑1 (MQ=255) aCCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTg > 2:1626512/1‑140 (MQ=255) aCCCTGTCC‑GCC‑CCCC‑TCTTTAAAGTAAGCCCATCATTTTCAGTCAGTTAACTTTGCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGTCCGGCTGGCTGTCTGGCTGTCTCTGATAATCAGCCGTCTGGTTg > 2:5887099/1‑140 (MQ=14) cccTGTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGc < 2:2024416/140‑1 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCCGGTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:6316322/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTNACTGATAATCAGCCGTCTGGTTGCGGGt > 1:5667743/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1061874/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt < 2:4058204/140‑1 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1514855/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1769196/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:2018613/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:2626397/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5804514/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3097144/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3376292/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3935106/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:5221948/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:6022065/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:652072/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:4456053/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3529482/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3664216/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGACGTCTGGTTGCGGGt > 2:3034304/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGGTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5453414/1‑140 (MQ=255) gTCC‑GCC‑CCCC‑TCTTTAAAGTAATCAAATCATTTTCAGTCAGTAAACTTTCCTGGAGAATCTCTCATGACACAGGCCGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGGTGCgggg > 2:3759811/1‑139 (MQ=14) | CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑C‑CCCC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |