| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,862,734 | +T | intergenic (+9/+41) | pphB → / ← ygbI | protein‑serine/threonine phosphatase/DNA‑binding transcriptional repressor YgbI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,862,733 | 1 | . | T | 98.7% | 893.7 / NA | 232 | intergenic (+8/+42) | pphB/ygbI | protein‑serine/threonine phosphatase/DNA‑binding transcriptional repressor YgbI |
| Reads supporting (aligned to +/- strand): ref base . (2/0); major base T (123/104); minor base G (3/0); total (128/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 250 total aligned reads displayed.
CAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAATCTCAT‑GC‑TCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTGAT > NZ_CP025268/2862594‑2862866 | caaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑Gc > 1:2105221/1‑140 (MQ=255) aaTAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑Gc‑tt < 1:3128778/140‑2 (MQ=255) aaTAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑Gc‑tt < 2:4184022/140‑2 (MQ=255) aTAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑Gc‑ttc > 1:4768709/1‑138 (MQ=255) aTAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑Gc‑ttc > 1:4806775/1‑138 (MQ=255) caccGGCGCTGATTATTGTATAATTGGACATATGAAGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCACAT‑Gc‑ttctt < 2:2694791/137‑5 (MQ=255) aaaCGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑Gc‑ttctt < 2:2364185/140‑5 (MQ=255) aaaCGGCGCTGATTATATTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑Gc‑ttctt < 2:4235314/140‑5 (MQ=255) aCGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTtcttct > 2:2400578/1‑140 (MQ=255) ggCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCtgt < 1:2669619/140‑1 (MQ=255) gcgcTGATTATTTGATATTTGGACATATGCTGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCAGAACAGCGGGCGGCTGTCATTTTATACAATAAAGTAGTCTCAT‑GCTTCTTCtgtg < 2:672771/140‑1 (MQ=255) cgcTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGa > 2:38272/1‑140 (MQ=255) cgcTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGa > 1:5741265/1‑140 (MQ=255) cTGATTATTTTATTTTTGGACATATGATGTTTGATATCCTTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCTCCGAACAGCGTGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGaat < 2:5680048/140‑2 (MQ=255) cTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAg < 1:2907854/140‑1 (MQ=255) attattTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTTGTCTCAT‑GCTTCTTCTGTGAAGCAt < 2:2119848/140‑1 (MQ=255) ttttATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGt < 2:545394/140‑1 (MQ=255) tttATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTATTCTCAT‑GCTTCTTCTGTGAAGCATGAGTa > 2:3459635/1‑140 (MQ=255) tttATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTa > 1:1015491/1‑140 (MQ=255) ttATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTaa < 2:3944772/140‑1 (MQ=255) ttATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTaa < 1:1084906/140‑1 (MQ=255) tataTTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAAc < 2:2904806/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAAcc < 1:368934/140‑1 (MQ=255) tatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAAccc < 1:359483/140‑1 (MQ=255) tatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAAccc < 1:3043915/140‑1 (MQ=255) tatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAAccc < 1:336997/140‑1 (MQ=255) atTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCg > 1:1807657/1‑140 (MQ=255) tGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGgtg < 1:6340725/140‑1 (MQ=255) ggACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGgtgt > 2:4276272/1‑140 (MQ=255) gACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGtt > 1:4098064/1‑140 (MQ=255) atgatgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATACAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGc > 2:3172711/1‑140 (MQ=255) tgatgTTTGCTCACATTCAGACGTTCGCTAACCAGATTTATCTTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCa < 2:5935425/140‑1 (MQ=255) tgatgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCa < 1:748728/140‑1 (MQ=255) tttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAAccc < 2:5745711/123‑1 (MQ=255) tttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCa > 2:4927811/1‑140 (MQ=255) tttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCa > 1:4329368/1‑140 (MQ=255) tGATAACATTCAGACGTTCGCTAACTAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCtgt > 2:4998637/1‑105 (MQ=255) tGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCNGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCatt > 1:5690626/1‑140 (MQ=255) tGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGa > 1:646010/1‑114 (MQ=255) tGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCatt > 1:5763723/1‑140 (MQ=255) gATAACATACAGACGTTCGCTAACCAGATTTATAGTGATACAGGATCGCCGAACAGCTGGAGGCTGTCATGAAATGAAATAAAGTAGTCTCAT‑GCTTCTGCTGTGAAGCAGGTGGATCCCGGTGATATTGCAGGcatgta > 2:5841312/1‑135 (MQ=255) aTAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCattat > 1:157556/1‑140 (MQ=255) aTAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCattat > 1:172063/1‑140 (MQ=255) cATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCAt > 1:5904292/1‑140 (MQ=255) ttCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCCTGAGTAACCCGGTGTTATTGCAGGCCATTATTCAttt > 2:5144970/1‑140 (MQ=255) gtCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCAttt > 2:3380974/2‑140 (MQ=255) gACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCg > 2:1975606/1‑140 (MQ=255) aCGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGc < 1:1533638/140‑1 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 1:5402935/140‑1 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 1:4638642/140‑1 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 2:2973989/140‑1 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTACCCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 2:2190771/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 1:5011329/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 1:3823577/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc < 2:1137509/140‑1 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 2:1121935/1‑140 (MQ=255) cGCTAACCAGATTTATCTTGATACCGGATCGCCGACCAGCGGGCGGCTGTCATTTAATAACATAAAGTAGTCTCATGGG‑TCGTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTCTTCATGAGTCGCTACCa > 2:3121794/1‑140 (MQ=255) cGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTCACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCa > 2:3612784/1‑140 (MQ=255) cGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCa > 2:5220138/1‑140 (MQ=255) cGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCa > 1:1131237/1‑140 (MQ=255) cAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAaga < 1:5432640/140‑1 (MQ=255) aTTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAagagag > 2:6286502/1‑140 (MQ=255) tatTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCt > 1:4245062/1‑140 (MQ=255) tatTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCt > 2:1419970/1‑140 (MQ=255) atTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTg > 1:4961535/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 2:1901280/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 2:6235938/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 1:3793022/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 1:1382812/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 1:1640828/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTAGAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGCAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGTGAGATCCTGCTTc > 2:5346632/1‑140 (MQ=255) aCCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTctc > 2:4429813/1‑138 (MQ=255) aCCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCAc < 1:883716/140‑1 (MQ=255) ggATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCCGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAg > 1:3299890/1‑140 (MQ=255) tCGCCGAACAGCGGGCGGCTGTCATTTTATCAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATGGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgc < 2:3551488/140‑1 (MQ=255) tCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgc > 2:4652225/1‑140 (MQ=255) gCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgcgc < 2:3534027/140‑1 (MQ=255) gCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgcgc > 2:6005218/1‑140 (MQ=255) gcgggcggCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCa < 1:6235939/140‑1 (MQ=255) cgggcggCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGAc > 1:3502234/1‑134 (MQ=255) cgggcggCTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATGATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCAc > 1:2014685/1‑140 (MQ=255) ggcggcTGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCActc > 2:6435831/1‑140 (MQ=255) tGTCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGc < 2:1812472/140‑1 (MQ=255) tCATTTTATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCaa > 1:5110463/1‑140 (MQ=255) ttttATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTCACCCGGTGTTATTGCAGGCCATTCTTCATTTTTCGCTACCAGCAAAGAGAGATCCGGCTGCACCAGCGCGCGACTGGCACTCTCCGGCAAAcc > 2:5767129/1‑140 (MQ=255) ttttATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAAcc < 2:1261040/140‑1 (MQ=255) ttttATAAAATAAAGTAGTCTCAT‑GCTTCGTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAAcc > 2:1444505/1‑140 (MQ=255) tttATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcg < 1:5164961/140‑1 (MQ=255) tttATAAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcg < 1:3100925/140‑1 (MQ=255) tataAAATAAAGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtc < 2:2562807/140‑1 (MQ=255) ataaaataaaGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcg > 1:2418282/1‑140 (MQ=255) ataaaataaaGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcg > 1:3694741/1‑140 (MQ=255) ataaaataaaGTAGTCTCAT‑GCGTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCAGGATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcttcg > 2:4711121/1‑140 (MQ=255) taaaataaaGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcgt < 1:4551897/140‑1 (MQ=255) aaaaataaaGGAGTCTCAG‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCCGGCAATTAGTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGCCTGCCACTCTCCGGCCCACcgtcgg < 2:4040164/139‑2 (MQ=255) aaataaaGTAGTCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCt > 1:2833762/1‑140 (MQ=255) agtagtCTCAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGtaata > 2:1382295/1‑140 (MQ=255) tctcAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTg > 1:940366/1‑140 (MQ=255) tcAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTGAt > 1:4288149/1‑140 (MQ=255) tcAT‑GCTTCTTCTGTGAAGCATGAGTAACCCGGTATTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTGAt > 2:1745733/1‑140 (MQ=255) | CAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAATCTCAT‑GC‑TCTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAATCTGAT > NZ_CP025268/2862594‑2862866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |