| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,239,247 | (T)6→7 | intergenic (+264/‑18) | ygjR → / → alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,239,241 | 1 | . | T | 95.6% | 1094.7 / 37.8 | 321 | intergenic (+258/‑24) | ygjR/alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Reads supporting (aligned to +/- strand): ref base . (6/8); new base T (122/180); total (128/193) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 365 total aligned reads displayed.
TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑TTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 | tgtgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCg > 1:3963376/1‑140 (MQ=255)tgtgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTATTGTGGGAAGTGAGACCTTGCCGGAAGGCGAGGTCGATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCg > 1:3405708/1‑140 (MQ=255) tgtgAAAAATCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑tt > 2:3045512/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑tt > 1:4204144/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑tt > 1:4277959/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑tt > 2:755715/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑tt > 2:3198066/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑tt > 1:4524622/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGACGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑tt > 2:2029631/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCAACGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTACCGACGTTGG‑CCG‑tt > 1:5046103/1‑140 (MQ=255) gtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑ttt > 2:1418832/1‑140 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑ttttt‑tt < 2:3515747/140‑2 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTGTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑ttttt‑tt < 2:4561031/140‑2 (MQ=255) aaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCACACGTATTCCTATTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCGATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑ACG‑ttttgtta > 2:1490408/1‑136 (MQ=255) aaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑ttttt‑ttat < 1:2679176/140‑4 (MQ=255) aaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑ttttt‑ttat < 2:3764358/140‑4 (MQ=255) cacaTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑Atgtg > 1:233092/1‑140 (MQ=255) cacaTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑ttttt‑ttat < 2:2563517/137‑4 (MQ=255) caTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTa > 1:3236204/1‑140 (MQ=255) caTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGGTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTa > 1:3634863/1‑140 (MQ=255) ggTCACCGGGCAACCCGAAAGTAATACGCAGCCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCATGAAGGCGAGGTCTATGCATAAAAAGCATCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGaa < 2:3579491/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGaa < 1:3900664/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGaa < 1:4843775/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGaa > 1:5115545/1‑140 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGaa < 2:1763117/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGaa < 1:1290663/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAAGACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGaa < 2:975844/140‑1 (MQ=255) gTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAAc > 2:5853471/1‑140 (MQ=255) tCACCGGGCAACCCGAAAGGAATACTCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACt < 1:1006864/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACt < 2:2405439/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACt < 2:1077473/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACt < 1:5581633/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACt > 2:1278972/1‑140 (MQ=255) ggCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATg < 2:34131/140‑1 (MQ=255) aaCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAAt < 1:2244231/140‑1 (MQ=255) aCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATa > 1:5392262/1‑140 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 2:4107260/140‑1 (MQ=255) gAATACGCAGACGTAGTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 2:2118871/140‑1 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc < 1:2109910/140‑1 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc < 1:5291460/140‑1 (MQ=255) ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg > 1:4431493/1‑140 (MQ=255) ttCCTTGTTTGATGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGACCTTCTATGAATACTGTCGGCACGCCGTTGCTAgggg > 2:5716997/1‑140 (MQ=255) ttttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCgg < 1:1138986/140‑1 (MQ=255) tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa > 2:5593869/1‑140 (MQ=255) tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa < 1:2764915/140‑1 (MQ=255) tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa > 2:5756597/1‑140 (MQ=255) tttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 1:2529097/140‑1 (MQ=255) tttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt > 1:3180664/1‑140 (MQ=255) gtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAAATTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgt > 2:3904288/1‑140 (MQ=255) tAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgtt < 2:491726/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:3664161/140‑1 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 1:343930/1‑140 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 1:892114/1‑140 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 1:4644080/1‑140 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 2:521369/1‑140 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTATATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 1:497382/1‑140 (MQ=255) aCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGc < 2:4715902/140‑1 (MQ=255) cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCa < 1:1833291/140‑1 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 1:1076991/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 1:3740274/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 1:6232662/1‑140 (MQ=255) gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑TTTTTGT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTa > 2:3310241/1‑140 (MQ=255) aGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTgg < 1:3583571/140‑1 (MQ=255) cGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTa < 1:1561380/140‑1 (MQ=255) cGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCGGTGGTTGTCGCCATTATGCTGGCTa > 2:1664834/1‑140 (MQ=255) aGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACGTCTATGAATACTGTCGGCACGCCGTTGCTCTGGGGCGGATTCGCGGTTGTTGTCGCCATTATGCTGGCTATc > 2:3244401/1‑140 (MQ=255) gTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa < 1:3334051/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 2:2695141/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt < 1:4748882/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt > 1:1666129/1‑140 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt < 1:1512655/140‑1 (MQ=255) aaaaGCTGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 2:4635052/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 2:5373201/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 1:3046627/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 1:4122340/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑TTTTT‑T‑ATGTGTAAGGAACTTCGATGAATACAGTAGGCAAGCCGTTGCGATGGGGCGGTTTCGCGGTTGTTGTCGCCATTATGCAGGCAATCGACCGGGTGTTGCa > 1:2922865/1‑140 (MQ=255) aaaGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCa > 1:6088877/1‑140 (MQ=255) aaGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑CTGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAg > 2:5401624/1‑140 (MQ=255) aaGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAg > 2:2889324/1‑140 (MQ=255) aaGCAGCGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAg < 1:6411997/140‑1 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg < 2:3809619/140‑1 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGG‑CCGATTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGGCGCCATTATGCAGGCTATCGACCTGTTGTTGCAggg < 2:3989127/140‑1 (MQ=255) cagcGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 2:4371184/140‑1 (MQ=255) agcGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGc > 1:2582985/1‑140 (MQ=255) agcGGCTGACGTCTTCCGACGGTCG‑CCG‑TTTTT‑TGATGTGTAAGGAACTTCTATGAATACGGTCGGCACGCGGTTGCTCTGGGGCGGAGACCCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTGGTTGCAGGGGc > 2:6005291/1‑140 (MQ=255) gcGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 2:1539830/140‑1 (MQ=255) gcGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 2:6287908/140‑1 (MQ=255) gcGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 2:1034496/140‑1 (MQ=255) gcGGCTGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCGGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg > 1:1975707/1‑140 (MQ=255) gcGGCTGACGTCGTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 1:719202/140‑1 (MQ=255) tGACGTCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 2:150810/140‑1 (MQ=255) cGTCTTCCGACGTTGGCCCA‑ATATT‑T‑ATGTGTACGGACCGTCTAAGAATACTGTCGGCACGCCGGTGCTTTGGGGCGGATTCGCTGATGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTgggg < 2:6450313/140‑1 (MQ=255) gTCTTCCGACGTTGG‑CCG‑TTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:115062/140‑1 (MQ=255) tCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:5108192/140‑1 (MQ=255) tCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:5913050/140‑1 (MQ=255) tCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:4405301/140‑1 (MQ=255) tCTTCCGACGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:120163/140‑1 (MQ=255) tCTTCCGACGTTGG‑CCGATTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTAAGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:2290812/140‑1 (MQ=255) cGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 1:6032299/140‑1 (MQ=255) cGTTGG‑CCGTTTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:6184801/140‑1 (MQ=255) | TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGG‑CCG‑TTTTT‑T‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |