| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,743,290 | +C | intergenic (‑66/‑116) | yiaJ ← / → galK | IclR family transcriptional regulator YiaJ/galactokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,743,289 | 1 | . | C | 97.1% | 583.8 / 9.2 | 173 | intergenic (‑65/‑117) | yiaJ/galK | IclR family transcriptional regulator YiaJ/galactokinase |
| Reads supporting (aligned to +/- strand): ref base . (5/0); new base C (92/76); total (97/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 179 total aligned reads displayed.
CTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAAAAA > NZ_CP025268/3743151‑3743423 | tctGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTGAT‑A‑A‑cc > 2:5660730/1‑139 (MQ=255) ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑ccaat > 1:1124629/1‑136 (MQ=255) ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑ccaat < 1:6158430/140‑5 (MQ=255) gCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑ccaatt < 1:4381268/140‑6 (MQ=255) cTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTg > 2:1426813/1‑140 (MQ=255) cTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTg < 2:5513255/140‑1 (MQ=255) ttCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑T‑CCAtttga > 2:1234175/1‑137 (MQ=255) ccGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGAtt > 1:5203042/1‑140 (MQ=255) cGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGAttt > 2:5109770/1‑140 (MQ=255) ggACGCTCTTTTTGCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCGGATGGTAGCGCACAGTGTGCCGGAGTTCACGATCGCGACAGTTACTTTAT‑ATC‑CAAGTGATTTTTATg > 2:6339065/1‑140 (MQ=255) ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATg > 2:1380057/1‑140 (MQ=255) ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATg > 1:6430360/1‑140 (MQ=255) aCGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATCATTTAT‑A‑ACCAATTGATTTTTATGTc > 2:2473258/1‑140 (MQ=255) gCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATAACTTCTATCACCAATTTGTCGCGTACTGATGGTAGCGCAAAGTGTTCCGTAGTTAACGATCTCTACCGATAATTTAT‑A‑ACCAATTGATTTTTATGTAtt > 1:81562/1‑140 (MQ=255) ctctTTTGCCTGCGCCATCTCGGTCTCTTGTTGGCCCATCACTTCTTTCCCCATTGTGTCGCGGCCGGATGGGAGCGCACAGTGTGCCGTAGTGCACGATCTCGACAGATAAGTTAT‑A‑ACCAATGGATGTTTATGTCttt > 2:2763677/1‑140 (MQ=255) ttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGaa < 2:2057443/140‑1 (MQ=255) ttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGaa < 2:5745193/140‑1 (MQ=255) gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATtcatc > 1:1676315/1‑140 (MQ=255) gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATtcatc > 1:1676306/1‑140 (MQ=255) gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGAGTTTTATGTCTTTTGAAATtcatc > 1:4667322/1‑140 (MQ=255) cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATtcatca < 1:1396312/140‑1 (MQ=255) gcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCaa > 2:4139777/1‑140 (MQ=255) gcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCaa < 1:1497009/140‑1 (MQ=255) tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag > 1:139785‑M1/1‑138 (MQ=255) tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag > 1:525071‑M1/1‑138 (MQ=255) ctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCaga < 2:612126‑M1/140‑4 (MQ=255) tcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagat < 2:1626560‑M1/140‑5 (MQ=255) ttCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTGT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgc > 1:6348193‑M1/1‑133 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:5954139‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:2324911‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:1288053‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:4338969‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:2433858‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:3345968‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:1620293‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:4840832‑M1/140‑9 (MQ=255) ctctTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcct < 1:6366846‑M1/140‑10 (MQ=255) tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt > 1:4981532‑M1/1‑128 (MQ=255) tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt > 1:4215408‑M1/1‑128 (MQ=255) tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt > 2:6077645‑M1/1‑128 (MQ=255) tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt > 1:3702007‑M1/1‑128 (MQ=255) tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt > 1:4215765‑M1/1‑128 (MQ=255) tttttttCCCATCAATTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt > 1:4215753‑M1/1‑128 (MQ=255) ttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgtt < 1:3099325‑M1/140‑14 (MQ=255) tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa < 1:2710862‑M1/140‑17 (MQ=255) tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa < 2:2943661‑M1/140‑17 (MQ=255) tCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaa > 1:4004252‑M1/1‑122 (MQ=255) tCCCATCACTTCGTGCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATGTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaa < 2:3314481‑M1/140‑19 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 2:2039756‑M1/140‑24 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 2:3553821‑M1/140‑24 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 2:265233‑M1/140‑24 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 1:2820091‑M1/140‑24 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 1:4884407‑M1/140‑24 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 2:5215837‑M1/140‑24 (MQ=255) ttcgtTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgat < 2:3800090‑M1/140‑28 (MQ=255) cccATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttg < 1:5465018‑M1/140‑35 (MQ=255) aTTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaa > 2:925925‑M1/1‑103 (MQ=255) tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc > 2:372341‑M1/1‑101 (MQ=255) cgTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttc > 1:2609985‑M1/1‑94 (MQ=255) gTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcg < 1:304735‑M1/140‑48 (MQ=255) gTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcg < 1:304973‑M1/140‑48 (MQ=255) tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc > 1:1166461‑M1/1‑92 (MQ=255) tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc > 2:634113‑M1/1‑92 (MQ=255) tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc > 1:3846383‑M1/1‑92 (MQ=255) gTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaa > 1:6272633‑M1/1‑84 (MQ=255) aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATCA‑C‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat > 2:1212388‑M1/1‑82 (MQ=255) aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat > 1:1154753‑M1/1‑82 (MQ=255) aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat > 1:2571657‑M1/1‑82 (MQ=255) aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat > 2:1250283‑M1/1‑82 (MQ=255) cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt > 1:4277808‑M1/1‑80 (MQ=255) cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt > 1:3179754‑M1/1‑80 (MQ=255) cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt > 2:4493558‑M1/1‑80 (MQ=255) cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgacttgttaaaaagtgatcgatatatttgaaatcaagtttagcatattgaaattt > 2:4753514‑M1/1‑80 (MQ=255) cAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatttta < 2:2515856‑M1/140‑63 (MQ=255) aGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagc > 1:687229‑M1/1‑75 (MQ=255) ccGTAGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaa > 2:1527729‑M1/1‑69 (MQ=255) aGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg < 2:4160365‑M1/140‑76 (MQ=255) aGTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg < 1:5289441‑M1/140‑76 (MQ=255) gTTCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcga < 1:4558971‑M1/140‑77 (MQ=255) ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagcccaaaaagcgat > 2:514998‑M1/1‑63 (MQ=255) ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat > 1:2689855‑M1/1‑63 (MQ=255) ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat > 2:3370851‑M1/1‑63 (MQ=255) ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat > 2:4941054‑M1/1‑63 (MQ=255) ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat > 1:2492728‑M1/1‑63 (MQ=255) ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 2:4666221‑M1/86‑24 (MQ=255) ttCACGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat > 1:4666221‑M1/1‑63 (MQ=255) aCGATCTCGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaa < 1:6166658‑M1/140‑81 (MQ=255) tctcGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaa > 2:2220700‑M1/1‑56 (MQ=255) ctcGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaa > 1:5761489‑M1/1‑55 (MQ=255) cGACAGATAATTTAT‑A‑ACCAATTGATTTTTATTTATTTTGAAATTCATCAATAagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagacaaaaaagcgatcaaaaataca > 2:738072‑M1/1‑53 (MQ=255) cGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaataaaaca > 1:159617‑M1/1‑53 (MQ=255) cGACAGATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca > 1:1254168‑M1/1‑53 (MQ=255) gATAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaa > 1:2216521‑M1/1‑48 (MQ=255) aTAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaag > 1:4942529‑M1/1‑47 (MQ=255) aTAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaag > 2:3419128‑M1/1‑47 (MQ=255) aTAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgagaaaaaaaacaaggaag > 2:710326‑M1/1‑47 (MQ=255) tAATTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacgaggaagc > 2:5652017‑M1/1‑46 (MQ=255) aTTTAT‑A‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcct > 2:3304345‑M1/1‑44 (MQ=255) tat‑a‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaagtaagcctggg > 2:5259039‑M1/1‑41 (MQ=255) tat‑a‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcctggg > 2:5022605‑M1/1‑41 (MQ=255) | CTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTAT‑A‑A‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAAAAA > NZ_CP025268/3743151‑3743423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |