BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	1292725 =	349 (0.920)	95 (0.300)	41/234	3.8	35.1%	intergenic (+182/+2)	narI/CXP41_RS06830	respiratory nitrate reductase subunit gamma/RtT sRNA
*	?	NZ_CP025268	= 1293258	56 (0.170)	95 (0.300)	41/234	3.8	35.1%	intergenic (‑44/+3)	CXP41_RS06840/CXP41_RS06845	RtT sRNA/tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 120 total aligned reads displayed.

TCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGA  >  NZ_CP025268/1293119‑1293396

tCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGTCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGt                                                                                                                                            <  2:1444250/140‑1 (MQ=255)

 cGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCTAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTg                                                                                                                                           <  2:3830017/140‑1 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  1:259806/140‑1 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  2:1057599/140‑1 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATAATTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          >  2:5640797/1‑140 (MQ=255)

  gCCCTTCGGGTCGTTGCCAGCGGCAACGCTCTCTCGCTGACGCGCGAGCCGAACCTTAGTCGACGCTTCTCATCCTTCCCCGCATGGGCAGACTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  2:2425597/140‑1 (MQ=11)

   cccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCTAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAt                                                                                                                                         <  1:1155833/140‑1 (MQ=255)

   cccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAt                                                                                                                                         <  2:1129262/140‑1 (MQ=255)

    ccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                        <  2:310819/140‑1 (MQ=255)

    ccTTCGGGTATTTGCCTGCGGCAACGCTCTCTCGCTTTCGATCGATCCTACCCTTTGTCGTATCTTCTCATCATTGCCCGCATGGGCAGAATTTTTTATTGAGGATTCGTTTGTGATTTCAGGTTCTTTTGAAAGTGAtg                                                                                                                                        <  1:2416113/140‑1 (MQ=2)

     cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                       <  1:1072520/140‑1 (MQ=255)

     cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAAACTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGATTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                       <  1:2630974/140‑1 (MQ=11)

       tCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGCTTGTGAGTTCAGGGACTTTTGAAAGTGAtggtg                                                                                                                                     >  2:422559/1‑140 (MQ=255)

       tCGGGTCGTTGCCTGCGGCAACGCTCTCACGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAAGATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACGTTTGAAAGTGAtggtg                                                                                                                                     >  1:1813412/1‑140 (MQ=11)

        cGGTTCGTTGCCTGCGGCAACGCTCTATCGCTTACTCTCTATCCGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCATATTTTTTGATTGCGGATTCGCTTGAGTGTTCAGGTACTTTTGAAAGTGAtggtgg                                                                                                                                    <  1:6086421/140‑1 (MQ=11)

        cGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGCCTCTCGAGCCGAACCTACGTCGAAGCTTATCATCCTTCCCCGCATGGGCAGCATAAGTGCATGCGGATTCGATTGAGAGTTCAGGGACAAATGAAACTGAtggtgg                                                                                                                                    <  2:2569918/140‑1 (MQ=11)

        cGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCCCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtgg                                                                                                                                    <  1:4121478/140‑1 (MQ=255)

        cGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTGAGTCGAAGCTTCTCATCCGTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtgg                                                                                                                                    <  2:762843/140‑1 (MQ=11)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGATCCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:3281814/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:5860502/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:3586320/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTAGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:2911126/140‑1 (MQ=255)

         gggTCGTGGCCTGCGGCAACGCTCTCTCGCTGACGATCGCGCCGACCCTTGGTCGAAGCGTCTCCTCCGTCCCCGCTTGGGCAGATTTTTTGATTGCGGATTCGCTTGAGATTTCTGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:4207255/140‑1 (MQ=11)

          ggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggtg                                                                                                                                  <  1:3806488/140‑1 (MQ=255)

          ggTCGTTGCCTGCGGCAACGCTCTCCCGCTGCCGCTCGAGCCGATCCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggtg                                                                                                                                  <  2:4603044/140‑1 (MQ=255)

           gTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggtgg                                                                                                                                 >  2:3930398/1‑140 (MQ=255)

           gTCGTTGCCTGCGGCAACGCTCTCTAGCTGGCGCTCAAGTAGAACCTTGGTCGAATCTTCTCAAACAACCCCGCGGTGGCCGAAAATGTGATTGCGGATTCGGTTGTGATTTCAGGGTCTTTTTAAAGTGTtgggggtgg                                                                                                                                 >  2:2279432/1‑140 (MQ=2)

            tCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  2:3746328/140‑1 (MQ=255)

            tCGTTGCCTGCGGCAACGCTCTCTCGCTGCCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATAATTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  2:3746355/140‑1 (MQ=255)

            tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  2:2614456/140‑1 (MQ=255)

            tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  1:4378878/140‑1 (MQ=255)

              ggtGCCTGCGGCAACGCACTCTCGCTGACGCTCCAGCCGAACCTTCGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATTTTTGATTGCGGATTCGCTTGAGAGTTCAGTGAATTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:5604178/138‑1 (MQ=11)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGCGCCGAACCTTAGTCGAAGCTTCTCCTCCTTCCCCGCTTGGGCAGAATTTTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:4009775/140‑1 (MQ=11)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGATTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:799864/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:3338838/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGAGTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:2113520/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATAGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:4973948/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:1970662/140‑1 (MQ=255)

                tGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCGTAGTCGAAGCTTCTCATCCATCCCCGCAAGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTGAGGGACTTTTTAAAGTGATGGTGGTGGGGGaa                                                                                                                            >  1:6102738/1‑140 (MQ=11)

                 gCCTGCGGCAACGCTCTCTCGCTGACGCTCTATCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTAGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAg                                                                                                                           <  1:5877511/140‑1 (MQ=11)

                   cTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:1648689/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:2959584/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:1229413/140‑1 (MQ=11)

                   cTGCGGCAACGCTCTCTCGCTGCCGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCATGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:1428667/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTATTCGAAGCTTCTCATCCTTCCCCGCATGGGCATAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:277689/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:3525406/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:3525374/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:1648719/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCGGCCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:1978069/140‑1 (MQ=255)

                       ggCAACGCTCTCTCGCTGACGCTCGCGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttac                                                                                                                     <  2:6189726/140‑3 (MQ=255)

                        gCAACGCTCTCTCGCTGGCGCTCTAGTCGCACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATATGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  2:1755771/140‑4 (MQ=11)

                        gCAACGCTCTCTCGCTGACGCTCGCGCCGAACCTTAGACGAAGCTTCTCCTCCTTCCCCGCATGGGCAGAATATTTGTTTGCGTATTCTCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  1:2882472/140‑4 (MQ=11)

                        gCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTCTCGAAGCGTCTCATCCGTCCCCGCCTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCCGGGACTTTTGCAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  2:5882160/140‑4 (MQ=1)

                        gCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  1:6295073/140‑4 (MQ=255)

                           aCGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGTGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttactccg                                                                                                                 >  2:5066583/1‑134 (MQ=11)

                                        ggCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTGGGGAATTCAGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAAACATCGAAGACGATg                                                                                                    >  1:3045649/1‑140 (MQ=11)

                                                      aCCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACa                                                                                      <  2:2481159/140‑1 (MQ=255)

                                                                     actcATCCTACCCCGCTTGGGCTGAATA‑TTCATTGCGGATTCGTTTGAGATTTCCGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGc                                                                      <  2:1498849/139‑1 (MQ=18)

                                                                       tcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:2579723/83‑1 (MQ=255)

                                                                              tCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCATCTTAGTCGATGACGGAAGATTTAGAGTCTGCACCCTATGGACTCTCggg                                                              >  2:1443070/1‑140 (MQ=14)

                                                                               ccccGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACgg                                                                                                >  2:2742560/1‑105 (MQ=14)

                                                                                 ccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                           <  2:765416/140‑1 (MQ=255)

                                                                                  cgctttggCATAATATTTGATTGAGGATTAGTGTGATTATTCCGGCGCTTTGGACAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAcc                                                          <  2:5009896/134‑1 (MQ=14)

                                                                                                  tttaTTGCGGATTCGTTTGAGATTTCCGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTc                                          <  2:753065/137‑1 (MQ=18)

                                                                                                     aTTGCGGATTCGTTTGTATGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCaaa                                       <  2:3123652/140‑1 (MQ=255)

                                                                                                                gttggtaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTaa                            <  2:5649876/133‑1 (MQ=255)

                                                                                                                gttgggaagTTCAGGGACTTTTGAAANTGATGGTGGTGGGGGAAGGATTCTAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCNAATTTTGAGGTaa                            <  1:5640963/133‑1 (MQ=255)

                                                                                                                gttgggaagTTCAGGGACTTTTGAAANTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCNAATTTTGAGGTaa                            <  1:5640797/133‑1 (MQ=255)

                                                                                                                 ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  2:4514031/134‑1 (MQ=255)

                                                                                                                 ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  1:6214252/134‑1 (MQ=255)

                                                                                                                 ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  2:4632573/134‑1 (MQ=255)

                                                                                                                    gtgacttCCGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  2:633201/135‑1 (MQ=255)

                                                                                                                    ggcagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  1:895654/137‑1 (MQ=255)

                                                                                                                    ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  1:4246100/137‑1 (MQ=255)

                                                                                                                    ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  1:2716749/137‑1 (MQ=255)

                                                                                                                    ggaagTGCAGGGACTTTTGAAAGCGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCATTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  2:5683670/137‑1 (MQ=255)

                                                                                                                     gaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCtt                       <  1:5218810/138‑1 (MQ=255)

                                                                                                                      aagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTg                      <  1:509393/139‑1 (MQ=255)

                                                                                                                        gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgag                    <  1:1244745/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:4190846/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  2:6032318/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:2038822/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:606348/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   >  1:2146887/1‑140 (MQ=255)

                                                                                                                          tCAGGGACTTTTGACCGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAt                  <  1:1760683/140‑1 (MQ=255)

                                                                                                                          tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTGTGAGGTAATGCGTGAGAt                  >  1:3172173/1‑140 (MQ=255)

                                                                                                                              ggACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtg              <  2:4971020/140‑1 (MQ=255)

                                                                                                                                aCTTTTGCAAGTGATGGTGGTGGGGTAAGGATTCGAACCGTCGAAGTCGATGACGGCATATTTCCAGTCTGCTCCCTTTGGNCGCTCGGGAACCCCCGCAGGGGTAATTCAAATTTTTAGGTAATGCTTGTGAtggtggt            <  1:5691041/140‑1 (MQ=255)

                                                                                                                                aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggt            <  1:5066583/140‑1 (MQ=255)

                                                                                                                                  ttttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggtgg          <  2:3831934/140‑1 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTTATTCATTTTTTGTGGTAATGGGTGAGAGGGGGGTggg         >  2:1839784/1‑140 (MQ=17)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg         >  1:716896/1‑140 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg         >  2:5117677/1‑140 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg         >  1:2756529/1‑140 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg         >  1:2292721/1‑140 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTCGAGGTAATGCTTGAGATGGTGGTggg         >  2:77868/1‑140 (MQ=255)

                                                                                                                                    ttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTgggg        >  2:838041/1‑140 (MQ=255)

                                                                                                                                     tgcaaGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGCTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACAAGGGGTAATTCTAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  2:6064189/137‑1 (MQ=255)

                                                                                                                                     tGAAAGTGTTGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  2:6102737/140‑1 (MQ=255)

                                                                                                                                     tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  1:1062893/140‑1 (MQ=255)

TCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGA  >  NZ_CP025268/1293119‑1293396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.