Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 4,492,041 +ATACGTGTAAT intergenic (‑52/+15) yjgR ← / ← idnR DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 = 44920411 (0.000)444 (1.270)
+ATACGTGTAAT
122/254 0.0 99.8% intergenic (‑52/+15) yjgR/idnR DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR
?NZ_CP025268 4492042 = 1 (0.000)intergenic (‑53/+14) yjgR/idnR DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR

Only 100 of 479 total aligned reads displayed.

GGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTA  >  NZ_CP025268/4491903‑4492179
                                                                                                                                           |                                                                                                                                         
catgacggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatg                                                                                                                                           >  1:2306291‑M2/140‑140 (MQ=255)
 atgacggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGa                                                                                                                                          >  1:3622450‑M2/139‑140 (MQ=255)
   gacggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAag                                                                                                                                        <  2:3402067‑M2/4‑1 (MQ=255)
    acggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAaga                                                                                                                                       <  2:581141‑M2/5‑1 (MQ=255)
    acggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAaga                                                                                                                                       <  1:388271‑M2/5‑1 (MQ=255)
        ttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGaaa                                                                                                                                   >  1:6424103‑M2/132‑140 (MQ=255)
        ttagccagtcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGaaa                                                                                                                                   <  2:3864804‑M2/9‑1 (MQ=255)
          agccattcccggcagtttaaacagttctgtgtcctgagtgcgggatatttacaggggttcactgatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAAt                                                                                                                                 <  1:2788930‑M2/11‑1 (MQ=255)
          agccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAAt                                                                                                                                 <  1:4366687‑M2/11‑1 (MQ=255)
            ccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATaa                                                                                                                               <  1:595862‑M2/13‑1 (MQ=255)
             cattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAAc                                                                                                                              <  1:4813385‑M2/14‑1 (MQ=255)
                tcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTa                                                                                                                           >  2:4911292‑M2/124‑140 (MQ=255)
                tcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTa                                                                                                                           >  2:4817023‑M2/124‑140 (MQ=255)
                tcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggtgcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGACAATAACCTa                                                                                                                           >  1:5534647‑M2/124‑140 (MQ=255)
                tccaggcagtaaaaacagttctgtgtccggcttgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgactgtattataggcaacgtccggcaaagagaataagtgtaatGAAGAGAAAATAACCTa                                                                                                                           >  2:4263561‑M2/124‑140 (MQ=255)
                      cagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCgt                                                                                                                     >  1:3794912‑M2/118‑140 (MQ=255)
                      cagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCgt                                                                                                                     <  1:2867758‑M2/23‑1 (MQ=255)
                       agtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCgtg                                                                                                                    >  2:5178095‑M2/117‑140 (MQ=255)
                           aaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGc                                                                                                                <  1:1163887‑M2/28‑1 (MQ=255)
                                 gttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGAt                                                                                                          >  2:1288720‑M2/107‑140 (MQ=255)
                                  ttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATa                                                                                                         <  1:2114225‑M2/35‑1 (MQ=255)
                                   tctgtgtccggcgtgcggtcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa                                                                                                        >  2:3551277‑M2/105‑140 (MQ=255)
                                   tctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa                                                                                                        >  1:1650186‑M2/105‑140 (MQ=255)
                                       tgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCt                                                                                                    >  2:2168785‑M2/101‑140 (MQ=255)
                                            ggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAc                                                                                               <  2:4106846‑M2/45‑1 (MQ=255)
                                            ggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAc                                                                                               <  2:4574836‑M2/45‑1 (MQ=255)
                                            ggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAc                                                                                               <  2:6415795‑M2/45‑1 (MQ=255)
                                                 gcgggcaatttacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAg                                                                                          <  2:2104242‑M2/50‑1 (MQ=255)
                                                 gcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAg                                                                                          <  1:587166‑M2/50‑1 (MQ=255)
                                                 gcgggcaattaacaggggttcactcaagagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAg                                                                                          <  1:5784946‑M2/50‑1 (MQ=255)
                                                   gggcatttaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGATGAGATAATAAACTAAAGCGTGTTGCCGTGTTAAATCTGATACCCGAGGt                                                                                        <  1:4599200‑M2/52‑1 (MQ=255)
                                                     gcaattaacaggggttcactcatgagatatcctccaggttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCa                                                                                      <  2:4723469‑M2/54‑1 (MQ=255)
                                                      caattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa                                                                                     <  1:3130621‑M2/55‑1 (MQ=255)
                                                      caattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa                                                                                     <  2:5684975‑M2/55‑1 (MQ=255)
                                                      caattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa                                                                                     <  1:1080093‑M2/55‑1 (MQ=255)
                                                        attaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACa                                                                                   <  1:6325623‑M2/57‑1 (MQ=255)
                                                        attaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACa                                                                                   <  1:772599‑M2/57‑1 (MQ=255)
                                                          taacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaccgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACagg                                                                                 >  2:6164105‑M2/82‑139 (MQ=255)
                                                            acaggggttcactcatgagatatcctccagtttcctgccaggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAgtgt                                                                               <  1:6136320‑M2/61‑1 (MQ=255)
                                                             caggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGtgtt                                                                              <  1:2437665‑M2/62‑1 (MQ=255)
                                                              aggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGtgttg                                                                             <  2:225870‑M2/63‑1 (MQ=255)
                                                                 ggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtgg                                                                          >  2:1554951‑M2/75‑140 (MQ=255)
                                                                   ttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt                                                                        >  2:3003439‑M2/73‑140 (MQ=255)
                                                                   ttcactcatgagatatcctccagtttcctgcatggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt                                                                        >  2:1233988‑M2/73‑140 (MQ=255)
                                                                     cactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggttgt                                                                      >  2:1474429‑M2/71‑140 (MQ=255)
                                                                          atgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCg                                                                 >  1:1275905‑M2/66‑140 (MQ=255)
                                                                          atgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCg                                                                 <  1:4147123‑M2/75‑1 (MQ=255)
                                                                            gagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATTAATCTGATACCCGAGGTCAACAGTGTTGTTGTTGTGATCGtt                                                               <  2:1790442‑M2/77‑1 (MQ=255)
                                                                            gagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGtt                                                               >  1:3035122‑M2/64‑140 (MQ=255)
                                                                             agatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTa                                                              >  1:5225409‑M2/63‑140 (MQ=255)
                                                                             agatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTa                                                              >  2:3682348‑M2/63‑140 (MQ=255)
                                                                                 atcctccagtttcctgcctggagtataggcaacgtccggccaagagactacgtgtaatGACGAGAAAATAAACTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGGTGTGGTTGTGATCGTTAtttt                                                          >  2:2364900‑M2/59‑140 (MQ=255)
                                                                                  tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt                                                         >  1:5450705‑M2/58‑140 (MQ=255)
                                                                                  tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt                                                         >  1:465809‑M2/58‑140 (MQ=255)
                                                                                  tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt                                                         >  2:4507102‑M2/58‑140 (MQ=255)
                                                                                    ctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTaa                                                       <  2:1914650‑M2/85‑1 (MQ=255)
                                                                                    ctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTaa                                                       >  2:5269696‑M2/56‑140 (MQ=255)
                                                                                    ctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTGGTGAGCGTTATTGTTaa                                                       >  1:420978‑M2/56‑140 (MQ=255)
                                                                                      ccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTGGTGATCGTTATTTTTAAtt                                                     >  1:1343833‑M2/54‑140 (MQ=255)
                                                                                       cagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAAttt                                                    >  2:3202176‑M2/53‑140 (MQ=255)
                                                                                         gtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTg                                                  >  2:5078850‑M2/51‑140 (MQ=255)
                                                                                              ctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAg                                             <  1:1554951‑M2/95‑1 (MQ=255)
                                                                                               tgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGc                                            <  2:1378601‑M2/96‑1 (MQ=255)
                                                                                                    ggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACAt                                       >  2:3300603‑M2/40‑140 (MQ=255)
                                                                                                      agtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAg                                                                                  >  2:5655982‑M2/38‑95 (MQ=255)
                                                                                                           aggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcg                                <  2:2819736‑M2/108‑1 (MQ=255)
                                                                                                           aggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcg                                >  2:3078029‑M2/33‑140 (MQ=255)
                                                                                                           aggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcg                                <  2:3622450‑M2/108‑1 (MQ=255)
                                                                                                           aggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACAATTGggcg                                <  2:5443468‑M2/108‑1 (MQ=255)
                                                                                                               aacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTNATTTTGCTCAGCAACATTTGGGCGGCCa                            >  1:5663658‑M2/29‑140 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGCTAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           >  2:864110‑M2/28‑140 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGTTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           >  1:4946271‑M2/28‑140 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           >  1:1805661‑M2/28‑140 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           >  2:927201‑M2/28‑140 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           >  2:3995184‑M2/28‑140 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           >  1:4715140‑M2/28‑140 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           >  1:5724751‑M2/28‑140 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           >  1:2629988‑M2/28‑140 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           <  1:2966840‑M2/113‑1 (MQ=255)
                                                                                                                acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGGTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                           >  2:2767070‑M2/28‑140 (MQ=255)
                                                                                                                  gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCCTcc                         >  1:6195220‑M2/26‑140 (MQ=255)
                                                                                                                  gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATcc                         >  1:3342087‑M2/26‑140 (MQ=255)
                                                                                                                  gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATcc                         >  2:2665566‑M2/26‑140 (MQ=255)
                                                                                                                  gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATcc                         >  1:3243627‑M2/26‑140 (MQ=255)
                                                                                                                  gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATcc                         >  2:1963308‑M2/26‑140 (MQ=255)
                                                                                                                  gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTGGTGATCGTTATTTTTAATTTTGCTCAGCACCATTTGGGCGGCCATcc                         >  2:4988934‑M2/26‑140 (MQ=255)
                                                                                                                     cgtcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAc                      <  2:4749272‑M2/118‑1 (MQ=255)
                                                                                                                     cggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAACGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAc                      <  2:6068815‑M2/118‑1 (MQ=255)
                                                                                                                     cggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAc                      >  1:3518226‑M2/23‑140 (MQ=255)
                                                                                                                     cggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAc                      <  1:4040671‑M2/118‑1 (MQ=255)
                                                                                                                     cggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAc                      <  1:5099553‑M2/118‑1 (MQ=255)
                                                                                                                     cggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAc                      <  1:920968‑M2/118‑1 (MQ=255)
                                                                                                                      ggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAACGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTAAGCAACATTTGGGCGGCCATCCGAcc                     <  2:597538‑M2/119‑1 (MQ=255)
                                                                                                                             agaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCa              >  1:1998467‑M2/15‑140 (MQ=255)
                                                                                                                                atacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCaaaa           >  2:2525759‑M2/12‑140 (MQ=255)
                                                                                                                                 tacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAAc          >  2:5589496‑M2/11‑140 (MQ=255)
                                                                                                                                 tacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGAGACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGTCCAACCGACCAATATCAAAAc          <  2:729143‑M2/130‑1 (MQ=255)
                                                                                                                                    gtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACggg       <  1:1887028‑M2/133‑1 (MQ=255)
                                                                                                                                     tgtaatGAAGAGAAAATAACCGAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACgggg      <  2:1080650‑M2/134‑1 (MQ=255)
                                                                                                                                       taatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAg    >  2:2427663‑M2/5‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                         
GGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTA  >  NZ_CP025268/4491903‑4492179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.