BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	737,902	A→G	intergenic (+3/‑148)	ybfD → / → ybgA	ISAs1 family transposase/YbgA family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	737,902	0	A	G	100.0%	1223.7 / NA	355	intergenic (+3/‑148)	ybfD/ybgA	ISAs1 family transposase/YbgA family protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (148/207); total (148/207)

Only 100 of 355 total aligned reads displayed.

ATTTCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAAAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGC  >  NZ_CP025268/737767‑738037

aTTTCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAg                                                                                                                                     <  2:1467623/140‑1 (MQ=255)

  ttCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAggg                                                                                                                                   <  1:1211658/140‑1 (MQ=255)

  ttCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAggg                                                                                                                                   <  1:3544475/140‑1 (MQ=255)

  ttCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAggg                                                                                                                                   <  2:5045998/140‑1 (MQ=255)

  ttCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAggg                                                                                                                                   <  1:555640/140‑1 (MQ=255)

  ttCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCNTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAANAGAAAggg                                                                                                                                   <  1:5705502/140‑1 (MQ=255)

  ttCCGCTGAAAGAATAAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAggg                                                                                                                                   <  2:6449543/140‑1 (MQ=255)

     cGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATATCCCTGATGAGCTTATTGATTTCACGTTTGTATAGTAAGGGCAg                                                                                                                                <  1:5717925/140‑1 (MQ=255)

       cTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCt                                                                                                                              <  1:4447772/140‑1 (MQ=255)

       cTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCt                                                                                                                              <  1:1891292/140‑1 (MQ=255)

       cTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCt                                                                                                                              <  2:5737364/140‑1 (MQ=255)

        tGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTa                                                                                                                             <  2:198647/140‑1 (MQ=255)

        tGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTa                                                                                                                             <  2:5387168/140‑1 (MQ=255)

        tGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTa                                                                                                                             <  2:2503086/140‑1 (MQ=255)

        tGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTa                                                                                                                             <  1:868853/140‑1 (MQ=255)

                  aaaTAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGaaa                                                                                                                   <  2:3890224/140‑1 (MQ=255)

                       atCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTAcc                                                                                                              <  1:2045210/140‑1 (MQ=255)

                        tcacAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCTATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTCTGGTTAGAAACTACCt                                                                                                             >  1:6338432/4‑140 (MQ=255)

                             aGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGCTGTCCCTGATGTGCGTATTGATTTCACGTTTGAATAGAAAGGGCAGGTATGGTTAGAAACTACCTGTCgg                                                                                                        >  2:2621394/1‑139 (MQ=17)

                             aGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGt                                                                                                        <  1:2449386/140‑1 (MQ=255)

                             aGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGt                                                                                                        <  1:4835821/140‑1 (MQ=255)

                             aGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGt                                                                                                        >  1:4015831/1‑140 (MQ=255)

                                  gACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTc                                                                                                   >  2:4714572/1‑140 (MQ=255)

                                  gACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTc                                                                                                   >  1:1229612/1‑140 (MQ=255)

                                   aCAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTcc                                                                                                  <  1:4300482/140‑1 (MQ=255)

                                   aCAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTcc                                                                                                  <  2:1543008/140‑1 (MQ=255)

                                   aCAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTATGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTcc                                                                                                  >  2:2191829/1‑140 (MQ=255)

                                   aCAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTAGTGATTTCTCGTTTGAATAGAAAGGGCTGCTATGGTTAGAAACTACCTGTCGTCAGTcc                                                                                                  >  1:257398/1‑140 (MQ=18)

                                       ttACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATGGTTTGCGATGTCCCTGATGAGCTGATTGATTTCACGTTTGAATAGTAAGGGCAGCTATGGTTAGAAACTACATGACGTAAGTCCTTGc                                                                                              >  2:2155659/1‑140 (MQ=18)

                                        tACGCAATTAGTGAACAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCg                                                                                             <  1:5472373/140‑1 (MQ=255)

                                        tACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCg                                                                                             <  1:4105252/140‑1 (MQ=255)

                                        tACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCg                                                                                             <  2:2288976/140‑1 (MQ=255)

                                        tACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCg                                                                                             <  1:3024197/140‑1 (MQ=255)

                                         aCGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCgg                                                                                            >  1:1736414/1‑140 (MQ=255)

                                          cGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCggg                                                                                           >  1:3854523/1‑140 (MQ=255)

                                              aTTAGTGCAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGATTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGc                                                                                       <  2:4787633/140‑1 (MQ=255)

                                               ttAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCa                                                                                      >  2:4526348/1‑140 (MQ=255)

                                                 aGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAgg                                                                                    >  2:917873/1‑140 (MQ=255)

                                                 aGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAgg                                                                                    >  2:1029338/1‑140 (MQ=255)

                                                     aaaaGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATTGAAAGGGCAGCTATGGTTAGAAACTAACTGACGTCAGTCCTTGCGGGGAGCAGGCttt                                                                                >  2:3632455/1‑140 (MQ=255)

                                                     aaaaGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATCTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCttt                                                                                <  1:5934771/140‑1 (MQ=255)

                                                             cACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAAtt                                                                        >  2:6363338/1‑140 (MQ=255)

                                                               cGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTAcc                                                                                                              >  1:2967555/1‑100 (MQ=255)

                                                                 gCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTc                                                                    <  1:1539978/140‑1 (MQ=255)

                                                                  cAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTcc                                                                   <  2:5787061/140‑1 (MQ=255)

                                                                    gagaAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGACCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTg                                                                 >  2:4256742/1‑140 (MQ=255)

                                                                     agaagaAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTAGTAAATTTGTCCTGc                                                                <  2:1808558/140‑1 (MQ=255)

                                                                          acaCCCGTCTTCATATTGTTTGCGATGTCCCTTATGAGCTTATTGATTTCACGTTTGAATCGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTacaa                                                           <  1:2281415/138‑1 (MQ=255)

                                                                          aaaCCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTacaa                                                           <  2:2111909/140‑1 (MQ=255)

                                                                          aaaCCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTacaa                                                           <  2:4041631/140‑1 (MQ=255)

                                                                           aaCCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTacaac                                                          <  1:4790123/140‑1 (MQ=255)

                                                                                gTCTTCATATTGATTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGAt                                                     <  2:2736462/140‑1 (MQ=255)

                                                                                 tCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGAtt                                                    <  2:304656/140‑1 (MQ=255)

                                                                                 tCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGAtt                                                    >  2:1964258/1‑140 (MQ=255)

                                                                                 tCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGAtt                                                    >  2:4345917/1‑140 (MQ=255)

                                                                                        atTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTca                                             <  2:747454/140‑1 (MQ=255)

                                                                                           gTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACaa                                          >  1:1064078/1‑140 (MQ=255)

                                                                                           gTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACaa                                          >  1:1261930/1‑140 (MQ=255)

                                                                                            tttGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTCCCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACaaa                                         >  2:565096/1‑140 (MQ=255)

                                                                                            tttGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACaaa                                         >  1:1030555/1‑140 (MQ=255)

                                                                                            tttGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACaaa                                         >  2:2699318/1‑140 (MQ=255)

                                                                                            tttGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACaaa                                         <  1:5796002/140‑1 (MQ=255)

                                                                                            tttGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGAGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACATCAGGATTAAGTTCACaaa                                         >  2:6431389/1‑140 (MQ=255)

                                                                                            tttGCGATGTCCCTGATGAGAGTATTGATTTCACGTTTGAATAGGAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCATTTCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGTATTAAATTCACaaa                                         >  1:374947/1‑140 (MQ=38)

                                                                                            tttGAGATGTCCCTGATGAGCTTATTGATTTCTCGTTTGAATTGAAAGGGCAGCTCTGGTTAGAAACTCCCTGACGTCTGTCCTTGCGGGGCGCAGGCTTTCGTAAAGTTGTCCTGCGACAACAGGAGTGACTTCACaaa                                         >  2:81713/1‑140 (MQ=255)

                                                                                             ttGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAat                                        >  2:2563745/1‑140 (MQ=255)

                                                                                             ttGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAat                                        >  2:3997560/1‑140 (MQ=255)

                                                                                             ttGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAat                                        >  2:3507892/1‑140 (MQ=255)

                                                                                              tGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAata                                       >  1:2146143/1‑140 (MQ=255)

                                                                                              tGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAata                                       >  1:2823042/1‑140 (MQ=255)

                                                                                               gCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAatat                                      <  1:6227338/140‑1 (MQ=255)

                                                                                                     tCCCTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTtc                                <  2:2355234/140‑1 (MQ=255)

                                                                                                      cccTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGTTTAGAAACTACCTGACGTCAGTCATTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACATGATTAACTTCACAATTATCTTTtct                               >  1:1354364/1‑140 (MQ=39)

                                                                                                       ccTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGTCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGATCAGGATTTCTTAAATTTTTCCTGATAAAACAGGATTAACTTCACTAATATCTTTtctc                              <  2:550459/140‑1 (MQ=255)

                                                                                                       ccTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTtctc                              <  2:31788/140‑1 (MQ=255)

                                                                                                       ccTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTtctc                              <  1:5041996/140‑1 (MQ=255)

                                                                                                       ccTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTtctc                              <  1:4912918/140‑1 (MQ=255)

                                                                                                        cTGATGAGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCa                             <  1:2725714/140‑1 (MQ=255)

                                                                                                         tgatgaGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATGTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCaa                            <  2:1731911/140‑1 (MQ=255)

                                                                                                             gaGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTc                        >  1:2623267/1‑140 (MQ=255)

                                                                                                              aGCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCt                       <  2:1404292/140‑1 (MQ=255)

                                                                                                               gcgtATGGATTTCACGTTGGAATAGAACGGGCAGCTATGGTTAGAAACTACCTGAAGTCAGTCCTTGCGGGGAGCAGGCTTTCGGAAATTTGTCCTGATCCTCCCGGAGTATCTGCACACATATCAGTTCTCAACGTCtg                      >  2:6124636/4‑139 (MQ=21)

                                                                                                               gCTTATTGATTTCACGTTTTAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTAAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTa                      >  2:2956351/1‑140 (MQ=255)

                                                                                                               gCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTa                      >  2:5199493/1‑140 (MQ=255)

                                                                                                               gCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTa                      >  2:36798/1‑140 (MQ=255)

                                                                                                               gCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTa                      >  1:2687105/1‑140 (MQ=255)

                                                                                                               gCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTa                      >  1:5147283/1‑140 (MQ=255)

                                                                                                               gCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTa                      >  2:620701/1‑140 (MQ=255)

                                                                                                               gCTTATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTa                      >  2:6073477/1‑140 (MQ=255)

                                                                                                               gCTTAGAGATTTCACGGTTGAGTAGAATGGGCCGCTCTGGTGAGAAACTACCTGACGTCAGTCCGTGCGGGGAGCAGGCTGTCGTAAATTTGTCCAGCTACAACAGGATGAACTGCACAAATTTGATTTCTGATGGTCTa                      >  2:1264070/1‑140 (MQ=255)

                                                                                                                 ttATTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTaca                    >  1:2924637/1‑140 (MQ=255)

                                                                                                                   aTTGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACt                  >  1:3225977/1‑140 (MQ=255)

                                                                                                                     tGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTa                <  2:5960674/140‑1 (MQ=255)

                                                                                                                     tGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTa                <  1:4517687/140‑1 (MQ=255)

                                                                                                                     tGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTa                <  1:679122/140‑1 (MQ=255)

                                                                                                                     tGATTTCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGATACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTa                <  2:2632522/140‑1 (MQ=255)

                                                                                                                          tCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCt           >  1:533357/1‑140 (MQ=255)

                                                                                                                          tCACGTTTGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCt           <  2:1235880/140‑1 (MQ=255)

                                                                                                                               tttGAATAGAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTaaa      <  1:39160/140‑1 (MQ=255)

                                                                                                                               ctggAATAGAAAGCGCAGCTAAGGTTAGAAACTACCTGACGTCAGTCCATGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTaaa      <  2:6047257/137‑1 (MQ=255)

ATTTCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAAAAAGGGCAGCTATGGTTAGAAACTACCTGACGTCAGTCCTTGCGGGGAGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGC  >  NZ_CP025268/737767‑738037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`