| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,028,065 | T→C | intergenic (‑41/‑178) | sulA ← / → sxy | cell division inhibitor SulA/CRP‑S regulon transcriptional coactivator Sxy |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,028,065 | 0 | T | C | 99.6% | 868.1 / NA | 249 | intergenic (‑41/‑178) | sulA/sxy | cell division inhibitor SulA/CRP‑S regulon transcriptional coactivator Sxy |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (118/130); minor base A (1/0); total (119/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 285 total aligned reads displayed.
AAGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGTACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTAA > NZ_CP025268/1027929‑1028201 | aaGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATgtacagcaca > 1:2499974/1‑140 (MQ=255) ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt > 1:4251062/1‑140 (MQ=255) ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt < 2:5585985/140‑1 (MQ=255) cagTAGTGCATTCCGTAGAGCCCCGCGCAAATTTACTAGCCGCGGACGAGACCGACGAAGCACGATGTGCATAGCCTGAAGAGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGAGGTACACCACATCCAGTGa < 2:1580914/138‑1 (MQ=255) cTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGa > 1:3704773/1‑140 (MQ=255) aGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaac < 2:2072746/140‑1 (MQ=255) gtgtTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaaca > 1:4994078/1‑140 (MQ=255) gtgtTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaaca < 1:1383925/140‑1 (MQ=255) gtgtTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaaca > 2:592987/1‑140 (MQ=255) gtgtTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaaca < 1:3359312/140‑1 (MQ=255) ttCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGAt > 1:1725431/1‑140 (MQ=255) cGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACATCAAAGATCaa > 2:4868356/1‑140 (MQ=255) cGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCaa > 1:6242707/1‑140 (MQ=255) agaCACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTa > 2:5111621/1‑140 (MQ=255) agaCACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTa < 2:5487030/140‑1 (MQ=255) cgcAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCgg > 2:2816462/1‑140 (MQ=255) ttttACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAaga < 1:2676683/140‑1 (MQ=255) ttttACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAaga > 2:3075499/1‑140 (MQ=255) ttACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGc < 1:5043853/140‑1 (MQ=255) tgcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaaca < 1:4614490/105‑1 (MQ=255) tgcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaa < 1:3281402/103‑1 (MQ=255) tgcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaa > 2:3281402/1‑103 (MQ=255) tgcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGACAGAGCCTCGCaaa > 2:1897841/1‑140 (MQ=255) tgcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCaaa > 2:2847232/1‑140 (MQ=255) gacgaAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGTTCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTCTCGTTGGt < 1:5718348/140‑1 (MQ=255) aaCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGa < 1:2313898/140‑1 (MQ=255) aCGATGTGCATAGCCTGAAGTGTACATACTCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGaa < 2:3667610/140‑1 (MQ=255) aTGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAAc < 1:1743170/140‑1 (MQ=255) aTGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAAc < 2:6191748/140‑1 (MQ=255) aTGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAAc < 2:1990722/140‑1 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa < 2:3602540/140‑1 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa < 1:1087610/140‑1 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa < 2:6284002/140‑1 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa < 1:829131/140‑1 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa < 2:3731447/140‑1 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa > 1:3442046/1‑140 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa < 1:324000/140‑1 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa > 2:5253245/1‑140 (MQ=255) cATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATaaa < 1:3947630/140‑1 (MQ=255) aTAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAAt > 2:1660828/1‑140 (MQ=255) gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACCTAAATTAATCtt > 2:2584093/1‑140 (MQ=255) gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCtt > 1:5609210/1‑140 (MQ=255) gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCtt > 1:6079776/1‑140 (MQ=255) gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCtt > 2:5034726/1‑140 (MQ=255) aaGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTg < 1:4121758/140‑1 (MQ=255) aaGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTg < 1:3103712/140‑1 (MQ=255) aGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGAt > 2:220454/1‑71 (MQ=255) aGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGAt < 1:220454/71‑1 (MQ=255) aGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGc < 1:840830/140‑1 (MQ=255) aGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGc > 2:3936626/1‑140 (MQ=255) tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt > 1:6420951/1‑140 (MQ=255) tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt < 2:3245009/140‑1 (MQ=255) tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt < 1:5343744/140‑1 (MQ=255) tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt > 1:4107620/1‑140 (MQ=255) tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt > 1:3965237/1‑140 (MQ=255) tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTGGGTGACGGGAAAACATAAATTAATCTTGCCCCt < 2:4217437/140‑1 (MQ=255) aCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCtt > 2:2671976/1‑140 (MQ=255) aatcaatcCAGCCCCTGTGAGTTCCTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGTGCCTCGCAAATTTTGTCGGTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAgt > 2:660866/1‑139 (MQ=255) caatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATa > 1:2451473/1‑140 (MQ=255) atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg > 2:2246257/1‑140 (MQ=255) atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg < 2:1366677/140‑1 (MQ=255) atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg < 1:2816462/140‑1 (MQ=255) atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg > 1:3502000/1‑140 (MQ=255) atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg < 1:200699/140‑1 (MQ=255) cAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTg < 2:1856667/140‑1 (MQ=255) gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACTACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGAAGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc < 2:4345476/140‑1 (MQ=255) gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc > 1:1286653/1‑140 (MQ=255) gCCCCTGTGAGTTACTGGATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc > 2:3898549/1‑140 (MQ=255) ccccTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCt > 2:4174800/1‑140 (MQ=255) tgtgAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGACAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAttt < 2:3029792/140‑1 (MQ=255) gtgAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAtttt > 1:4680135/1‑140 (MQ=255) gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAATTTGCCTATTTTCg < 1:5654415/140‑1 (MQ=255) tACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGt < 2:6420950/140‑1 (MQ=255) tGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTaa > 2:1863571/1‑140 (MQ=255) tATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACTTAAATTAATCTTGCCCCTTATGAATAAGTTTCGTATTTTCGTAGTTAACg > 2:401318/1‑140 (MQ=255) tATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACg > 1:2858714/1‑140 (MQ=255) tATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACg > 2:571059/1‑140 (MQ=255) aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg < 1:5477778/140‑1 (MQ=255) aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg < 1:1629606/140‑1 (MQ=255) aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg < 1:1463959/140‑1 (MQ=255) tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa > 1:4903666/1‑140 (MQ=255) tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa > 1:2969848/1‑140 (MQ=255) tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa > 2:2320421/1‑140 (MQ=255) tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTGAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa > 1:999903/1‑140 (MQ=255) tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCACCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa > 2:1467122/1‑140 (MQ=255) aTGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGGAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGAtac > 2:2501215/1‑138 (MQ=255) tGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCg < 2:1772036/140‑1 (MQ=255) gtacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGt < 1:3838353/140‑1 (MQ=255) gtacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGt < 2:5525595/140‑1 (MQ=255) gtacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGt < 2:4574974/140‑1 (MQ=255) gtacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGt < 1:526464/140‑1 (MQ=255) tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt > 2:4226981/1‑140 (MQ=255) tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt > 2:5878507/1‑140 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACTGGAAAACAAAAATTAATCTTGACCCTTAAGAATAAGTTGCCAATTTTCGTATTAAACGGATCCGTTaa > 2:2681618/1‑140 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAAt > 2:1113030/1‑85 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAAt < 1:1113030/85‑1 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTaa > 1:2123533/1‑140 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTaa > 2:4728446/1‑140 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTaa > 1:4537447/1‑140 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAAGTTTGTCGTTGGTGACGGGAAAACATAATTTAATCTTGCCCCTTAGGAATTAGTTGCCGATTTTCGTAGTTAACGGATCCGTTag > 2:5965484/1‑139 (MQ=255) | AAGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGTACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTAA > NZ_CP025268/1027929‑1028201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |