BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,432,712	T→C	P278P (CCA→CCG)	CXP41_RS07635 ←	IS5‑like element ISKpn26 family transposase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,432,712	0	T	C	100.0%	1007.4 / NA	390	P278P (CCA→CCG)	CXP41_RS07635	IS5‑like element ISKpn26 family transposase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (242/148); total (242/148)

Only 100 of 390 total aligned reads displayed.

CTCTCCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAATGGGTGCTCCACCCTGGCCCGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGTGGATGCTGTTTCAAGGTTCTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGG  >  NZ_CP025268/1432575‑1432848

 tctcCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACggg                                                                                                                                       >  1:5221854/1‑140 (MQ=255)

 tctcCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACggg                                                                                                                                       <  2:1716688/140‑1 (MQ=255)

 tctcCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACggg                                                                                                                                       <  1:2188383/140‑1 (MQ=255)

 tctcCCACTGACGAATCAGTTGGTCCACCCGAAACAGGTTGGCCAGGGTGACAAACCTCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTGTCCCGAAGCCGAACTGCCGCTTGAGGATGCGAGACggg                                                                                                                                       >  2:2919323/1‑140 (MQ=11)

     ccACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCt                                                                                                                                   <  1:5616043/140‑1 (MQ=255)

      cACTGACGTATCATTTGGTTCACCCGATACATGTTGGCCAGGGTGAATAACATCGCCAGTTGTTTATCGTTTTTCAGCAGCCCATTTTATCTGGCTTTCTCGAAGCCGAACTGCCGCTTTATGATGCGAAACGGGTGCTc                                                                                                                                  <  2:5279519/140‑1 (MQ=11)

      cACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTc                                                                                                                                  <  1:1284334/140‑1 (MQ=255)

       aCTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTcc                                                                                                                                 <  2:4653587/140‑1 (MQ=255)

        cTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCa                                                                                                                                >  1:3063957/1‑140 (MQ=255)

          gACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCAcc                                                                                                                              >  2:4130007/1‑140 (MQ=255)

           aCGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCAccc                                                                                                                             >  2:2559955/1‑140 (MQ=255)

           aCGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCAccc                                                                                                                             >  1:467767/1‑140 (MQ=255)

             gTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGGCTCTGGCTTTCACGAAGCCGAACTGCCGCTTGCTGAGGCGAAACGGGTGCTCCACCCTg                                                                                                                           >  2:5522076/1‑140 (MQ=11)

               aTCATTTGGTCCACCCTAAACAGGTTGGCCAGGTTGAAAAACATCGCCCGATGGTTATCGTTTTTCAGCAGCCCCTTGTATATGGCTTTCACGAAGCCGAACTGCAGCTTGATTATGAGAAACGGGTGCTCCACCCTGGc                                                                                                                         >  2:5769430/1‑140 (MQ=11)

               aTCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGc                                                                                                                         >  1:2410392/1‑140 (MQ=255)

               aTCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGc                                                                                                                         >  2:895520/1‑140 (MQ=255)

                tCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGca                                                                                                                        >  1:2721931/1‑139 (MQ=255)

                tCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGca                                                                                                                        >  1:5449622/1‑139 (MQ=255)

                tCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGca                                                                                                                        <  1:6138812/140‑2 (MQ=255)

                tCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGca                                                                                                                        >  1:4093297/1‑139 (MQ=255)

                 cATTTGGTCCACCCGAAGCAGGTTGGCCAGGTTGTCTAACCTCGCCAGGTGGTTATCGTTTTTCAGCAGCCCCTTGTAGCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGAGGCGAAACGGGTGCTCCCCCCTGGcac                                                                                                                       >  2:4318332/1‑138 (MQ=11)

                 cATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGcac                                                                                                                       <  1:66302/140‑3 (MQ=255)

                 cATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGcac                                                                                                                       <  1:2839130/140‑3 (MQ=255)

                   tttGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACgg                                                                                                                     >  2:5207027/1‑140 (MQ=255)

                      ggTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCCGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATg                                                                                                                  >  1:6077372/1‑140 (MQ=255)

                      ggTCCACCCAAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATg                                                                                                                  >  1:1804327/1‑140 (MQ=255)

                       gTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGc                                                                                                                 <  1:5167584/140‑1 (MQ=255)

                       gTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGc                                                                                                                 >  2:100771/1‑140 (MQ=255)

                        tCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCt                                                                                                                >  1:4944285/1‑140 (MQ=255)

                           aCCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCCGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCGTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGc                                                                                                             >  2:1976587/1‑140 (MQ=11)

                           aCCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGc                                                                                                             <  1:5092456/140‑1 (MQ=255)

                            cccGAACCAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCt                                                                                                            <  1:3732987/140‑1 (MQ=255)

                            cccGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCt                                                                                                            <  1:1442870/140‑1 (MQ=255)

                             ccGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCtt                                                                                                           >  1:4468091/1‑140 (MQ=255)

                                 atcAGGTTGTCCAGTGTGAATAACATCTACAGTTTGTTTTCGTTTTTCATCAGCCCCTTGTATCTGGCTTTAAAGAATCCTATCTGACGATTTATGATGCGATACGGGTGATCCACCCTGTCACGGATGCTGGCTTTCAt                                                                                                       <  2:456728/138‑1 (MQ=2)

                                 aaCAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCAt                                                                                                       >  1:1859857/1‑140 (MQ=255)

                                     ggTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTAt                                                                                                   >  2:2415786/1‑140 (MQ=255)

                                      gTTGGCCAGGGTGAATAACATCGCCAGTTGGTTCTCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTAtt                                                                                                  >  2:3805346/1‑140 (MQ=255)

                                      gTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTAtt                                                                                                  >  2:5813859/1‑140 (MQ=255)

                                      gTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTAtt                                                                                                  >  1:5804891/1‑140 (MQ=255)

                                        tGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCg                                                                                                <  2:3658237/140‑1 (MQ=255)

                                         ggCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGa                                                                                               >  1:624787/1‑140 (MQ=255)

                                           ccAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATg                                                                                             >  1:4835701/1‑140 (MQ=255)

                                           ccAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATg                                                                                             >  2:258766/1‑140 (MQ=255)

                                                gTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGAt                                                                                        >  1:2638821/1‑140 (MQ=12)

                                                  gAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATgg                                                                                      <  2:313599/140‑1 (MQ=12)

                                                    aTAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGcc                                                                                    >  2:3225403/1‑140 (MQ=12)

                                                        cATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTCTTCGATGTTGATGGACGttt                                                                                >  2:4434232/1‑140 (MQ=11)

                                                         aTCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGtttt                                                                               >  1:1023068/1‑140 (MQ=12)

                                                          tCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTg                                                                              >  1:4308826/1‑140 (MQ=12)

                                                           cGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGt                                                                             >  2:1141273/1‑140 (MQ=12)

                                                             ccAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTc                                                                           >  2:6325221/1‑140 (MQ=12)

                                                             ccAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTc                                                                           >  2:1564409/1‑140 (MQ=12)

                                                             ccAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTc                                                                           >  2:6089769/1‑140 (MQ=12)

                                                             ccAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTGTTGTTc                                                                           >  2:3551933/1‑140 (MQ=255)

                                                             ccAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTGCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCAGGGATGCTGGCTTTCATGTAGTCGATGGTGATGGCCGTTTTGttg                                                                           >  2:4363576/1‑139 (MQ=11)

                                                              cAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCt                                                                          <  2:4003895/140‑1 (MQ=12)

                                                                 ttGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGc                                                                       <  1:3825469/140‑1 (MQ=12)

                                                                 ttGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGc                                                                       >  1:3638090/1‑140 (MQ=12)

                                                                  tGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCg                                                                      <  1:937481/140‑1 (MQ=12)

                                                                    gTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCgcg                                                                    <  1:2003691/140‑3 (MQ=255)

                                                                      tATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGa                                                                  >  1:3663581/1‑140 (MQ=255)

                                                                       aTCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGGTTTGTTCTTGCGCGGag                                                                 >  2:3288977/1‑139 (MQ=11)

                                                                        tCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGAtt                                                                <  2:1315497/140‑2 (MQ=255)

                                                                         cGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGAttc                                                               <  2:6163366/140‑3 (MQ=11)

                                                                           tttttCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTg                                                             <  1:5571132/140‑1 (MQ=11)

                                                                             tttCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTgct                                                           >  1:5985277/1‑138 (MQ=11)

                                                                               tCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTc                                                         <  2:4596709/140‑1 (MQ=11)

                                                                                cagcagCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCa                                                        <  1:1193466/140‑1 (MQ=11)

                                                                                   cagcCCCTTGTATCTGGCTTTCACGAAGCCGAACAGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTAATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAgg                                                     >  2:2177442/1‑140 (MQ=11)

                                                                                                    cTTTCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTAGCGCGGATTCAGCTTCAAGGTTTGTACCTTGCCGGGa                                    <  2:1197226/140‑1 (MQ=11)

                                                                                                       tCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGc                                 >  2:5962466/1‑140 (MQ=11)

                                                                                                       tCACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGc                                 >  1:3917901/1‑140 (MQ=11)

                                                                                                        cACGAAGCCGAACTGCCGCTTGATGATGCGCAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCt                                <  2:1624205/140‑1 (MQ=11)

                                                                                                        cACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGTGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCt                                <  2:697044/140‑1 (MQ=11)

                                                                                                        cACGAAGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCt                                <  2:4992146/140‑1 (MQ=11)

                                                                                                             aGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCg                           >  1:4978303/1‑140 (MQ=11)

                                                                                                             aGCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCg                           <  1:2339907/140‑1 (MQ=11)

                                                                                                              gCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGa                          <  1:707741/140‑1 (MQ=11)

                                                                                                              gCCGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGATCTTGCGCGGATTCTGCTTCAAGGTTTTTCCCTTGCCGGGACGCTCGGCGa                          <  2:5378212/140‑1 (MQ=11)

                                                                                                                cGAACTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGGTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATc                        <  2:2101564/140‑1 (MQ=11)

                                                                                                                  aaCTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTGTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAg                      >  2:36011/1‑140 (MQ=11)

                                                                                                                   acagccGCTTGATGATGCGAAACGGGTGCACCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGc                     <  2:3006429/135‑1 (MQ=11)

                                                                                                                   aCTGCCGCTTGATGATGCGCACCGGGTGCTCCACCCTGGCCCGGATGCTGGCTTTCCTGGATTCGATGTGGATGGCCGTTTTGTTCTTGCGCGGCTTCTGCTTCAAGGTTTTTCCCTTGCCGGGACGCTCGGCGATCAGc                     <  2:1818718/140‑1 (MQ=11)

                                                                                                                   aCTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCCCTGATGCTGGCGTTCATGTATTCGATTTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGc                     <  2:5695429/140‑1 (MQ=11)

                                                                                                                   aCTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGc                     >  1:1634093/1‑140 (MQ=11)

                                                                                                                   aCTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGc                     <  1:4387721/140‑1 (MQ=11)

                                                                                                                   aCTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGc                     <  2:4776348/140‑1 (MQ=11)

                                                                                                                   aCTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTAGTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGc                     <  2:4962020/140‑1 (MQ=11)

                                                                                                                   aCTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGATTTCATGTATTCGATGTTGATGGCCGTTTTGTACTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGc                     <  2:2824386/140‑1 (MQ=11)

                                                                                                                    cTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGcc                    <  2:4099841/140‑1 (MQ=11)

                                                                                                                    cTGCCGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGcc                    <  1:2919092/140‑1 (MQ=11)

                                                                                                                     tgccGCATGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTGACCTTGCCGGGACGCTCGGCGATCAGCCa                   <  2:1277274/137‑1 (MQ=11)

                                                                                                                        cGCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTc                <  1:3444809/140‑1 (MQ=11)

                                                                                                                         gCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTcc               >  1:1371293/1‑140 (MQ=11)

                                                                                                                         gCTTGATGATGCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTcc               >  2:3866536/1‑140 (MQ=11)

                                                                                                                            tgatgaTGCGAAACGGGTGCTCCACACTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTGTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCcacc            >  2:4502140/1‑139 (MQ=11)

                                                                                                                                 atgCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCAc       >  1:322089/1‑140 (MQ=11)

                                                                                                                                  tgCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCAcc      <  1:2488901/140‑1 (MQ=11)

                                                                                                                                   gCGAAACGGGTGCTCCACCCTGGCACGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGCGGATTCTGCTTCAAGGTTTTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCt     <  2:4865797/140‑1 (MQ=11)

CTCTCCCACTGACGTATCATTTGGTCCACCCGAAACAGGTTGGCCAGGGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAGCCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAATGGGTGCTCCACCCTGGCCCGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGTGGATGCTGTTTCAAGGTTCTTACCTTGCCGGGACGCTCGGCGATCAGCCAGTCCACATCCACCTCGG  >  NZ_CP025268/1432575‑1432848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`