Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 2,229,079 T→C *196* (TAA→TAG)  yohC ← Yip1 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252682,229,0790TC100.0% 956.9 / NA 276*196* (TAA→TAG) yohCYip1 family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (116/160);  total (116/160)

Only 100 of 276 total aligned reads displayed.

CGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTTTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGA  >  NZ_CP025268/2228943‑2229214
                                                                                                                                        |                                                                                                                                       
cgcACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGTACTTTCTAg                                                                                                                                      >  1:5833394/1‑140 (MQ=255)
cgcACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAg                                                                                                                                      >  1:3993468/1‑140 (MQ=255)
cgcACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAg                                                                                                                                      >  1:4441171/1‑140 (MQ=255)
cgcACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAg                                                                                                                                      >  1:4945513/1‑140 (MQ=255)
  cACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGaa                                                                                                                                    <  2:6006742/140‑1 (MQ=255)
    ccgccgGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACa                                                                                                                                  <  2:6435117/140‑1 (MQ=255)
    ccgccgGAGTAAGGAATTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGTATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACa                                                                                                                                  <  2:5497388/140‑1 (MQ=255)
       ccgGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAAc                                                                                                                               >  1:3400216/1‑140 (MQ=255)
        cgGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACg                                                                                                                              >  1:6221771/1‑140 (MQ=255)
         ggAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGa                                                                                                                             <  1:753823/140‑1 (MQ=255)
          gAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGAt                                                                                                                            <  1:1642027/140‑1 (MQ=255)
          gAGTAAGGATTAACTGAGGCTAGCGACGCCATCATAACGAGCAATAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGAt                                                                                                                            <  2:6295194/140‑1 (MQ=255)
           aGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATa                                                                                                                           >  1:4526780/1‑140 (MQ=255)
               aGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCACTGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCg                                                                                                                       >  1:1032123/1‑140 (MQ=255)
               aGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCg                                                                                                                       <  2:5094470/140‑1 (MQ=255)
               aGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCg                                                                                                                       <  1:2568983/140‑1 (MQ=255)
               aGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCg                                                                                                                       <  2:3375084/140‑1 (MQ=255)
               aGGAGTAACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCg                                                                                                                       <  2:2744128/140‑1 (MQ=255)
                ggATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGt                                                                                                                      <  1:5782424/140‑1 (MQ=255)
                 gATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTa                                                                                                                     >  2:2931992/1‑140 (MQ=255)
                  aTTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAg                                                                                                                    <  2:4978991/140‑1 (MQ=255)
                    ttACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGcc                                                                                                                  <  1:2262596/140‑1 (MQ=255)
                    ttACTGAGGCTAGCGACGCCATCAGAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGcc                                                                                                                  <  2:3929446/140‑1 (MQ=255)
                     tACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGccc                                                                                                                 >  1:1213740/1‑140 (MQ=255)
                       ccgacgCTAGCGCCGCCATCATCACGAGCACACAGAGCGATCGACAAAGCAGAAACGTGAGGAAATGCTGCAGAGCTGACATTTACGCCAGCAATGCATCGTCACAGAAGTTTCTAGCACAAACGATTACCGTAGCCCCa                                                                                                               <  2:5893726/135‑1 (MQ=255)
                       cTGATGCTAGCGACGCCATCATAACGAGCAAACAGTGCGATCGTCAACTGAGAAGCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCa                                                                                                               <  2:4989702/140‑1 (MQ=255)
                       cTGAGTCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCa                                                                                                               <  2:1590356/140‑1 (MQ=255)
                       cTGAGGCTCGCGACGCCATCAGAACGAGCAAAACGTGCGACCGCCCCAGGAGAAGCGAGAGGAAATGCTGCATGGCTGACATTTACGCCAGCAATGCCACGTCCCACAACGTTCTAGAACAAACGCCCACCGTAGCCCCa                                                                                                               <  2:490618/140‑1 (MQ=255)
                       cTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCa                                                                                                               <  1:3136072/140‑1 (MQ=255)
                       cTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCa                                                                                                               <  1:1347402/140‑1 (MQ=255)
                       cTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCa                                                                                                               <  1:6282412/140‑1 (MQ=255)
                       cTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCa                                                                                                               <  1:4398459/140‑1 (MQ=255)
                       cTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCa                                                                                                               <  2:4520378/140‑1 (MQ=255)
                            gCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGta                                                                                                          >  1:4617359/1‑140 (MQ=255)
                            gCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGta                                                                                                          >  1:2076214/1‑140 (MQ=255)
                            gCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAAAGATAACCGTAGCCCCATAGta                                                                                                          >  1:5258273/1‑140 (MQ=255)
                             cTAGCGCCGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGACATGCTGCAGTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAACCGATAACCGTAGCCCCATAGtat                                                                                                         <  2:1042038/140‑1 (MQ=255)
                             cTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGtat                                                                                                         <  2:6166390/140‑1 (MQ=255)
                             cTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGtat                                                                                                         <  1:6245392/140‑1 (MQ=255)
                             cTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGtat                                                                                                         <  2:737841/140‑1 (MQ=255)
                             cTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGtat                                                                                                         <  1:890472/140‑1 (MQ=255)
                             cTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGtat                                                                                                         <  1:4109994/140‑1 (MQ=255)
                               aGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCCAAGGAGAATCGTGAGGAACTGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTCGAACAAACGATAACCGTAGCCCCATAGTATaa                                                                                                       >  2:3489782/1‑140 (MQ=255)
                                  gACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCAGTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACgg                                                                                                    <  1:2128474/140‑1 (MQ=255)
                                    cGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGtt                                                                                                  >  2:4725187/1‑140 (MQ=255)
                                      ccATCATAGCGAGCAACCAGTGCGATCGGCAAAGGAGAATCGTGAGGATATGCTGCATTGCTGACATTTACGCCAGCACTGCAAGGTCCAAGTACTGTCTAGAACAAACGATAGCCGTAGCGCGATAGTAGAAGGGTGAg                                                                                                >  2:5686563/1‑140 (MQ=255)
                                      ccATCATAACGAGCATAAAGTGCGATCGTCAATGGAGAATCGTGTGGAAATGCTGCATTGCTGACATTTACGCCAGCACTGCTACGGCAAGGTACGTTCTAGAACAAACGATAACCGTAGCCCCAGTGTATCACGGTTAg                                                                                                >  2:1772457/1‑140 (MQ=255)
                                      ccATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAg                                                                                                >  1:4487335/1‑140 (MQ=255)
                                          catAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCCTAGTATAACGGTTAGGGCg                                                                                            >  2:3729532/1‑140 (MQ=255)
                                               cGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGagcag                                                                                       <  1:4996544/140‑1 (MQ=255)
                                                gAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGagcagc                                                                                      <  1:1785360/140‑1 (MQ=255)
                                                 aGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAgcagca                                                                                     >  2:5417652/1‑140 (MQ=255)
                                                   cAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACt                                                                                   >  1:4702088/1‑140 (MQ=255)
                                                   cAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACt                                                                                   >  1:3831565/1‑140 (MQ=255)
                                                   cAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACt                                                                                   >  1:3936239/1‑140 (MQ=255)
                                                        aGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGagcag                                                                                       >  2:4619592/1‑131 (MQ=255)
                                                          tGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTa                                                                            >  2:3987867/1‑140 (MQ=255)
                                                                cGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATATACGCCAGCCATGCAACGTCAAAGAACTATCTAGAACAAACGATAACCGTAGCCCCATCGTATAACGGGTAGGGCGAGCAGCACTTCCAGTACCAGCa                                                                      >  2:3235311/1‑140 (MQ=255)
                                                                           aaTCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGcc                                                           >  2:840717/1‑140 (MQ=255)
                                                                           aaTCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGcc                                                           >  1:662782/1‑140 (MQ=255)
                                                                            aTCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCa                                                          >  1:6013360/1‑140 (MQ=255)
                                                                               gTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCACAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCg                                                       <  2:2100044/140‑1 (MQ=255)
                                                                                tGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGTCAATCGCCAGCGt                                                      <  1:5650922/140‑1 (MQ=255)
                                                                                tGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGt                                                      <  2:2350285/140‑1 (MQ=255)
                                                                                tGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAAAGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCgg                                                      >  2:6225918/1‑139 (MQ=255)
                                                                                  aGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAATCGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCg                                                    >  2:425820/1‑140 (MQ=255)
                                                                                  aGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCg                                                    <  1:3312586/140‑1 (MQ=255)
                                                                                     aaaTGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAAc                                                 <  1:2970516/140‑1 (MQ=255)
                                                                                       aTGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTa                                               >  1:5883142/1‑140 (MQ=255)
                                                                                       aTGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTa                                               >  2:129026/1‑140 (MQ=255)
                                                                                         gctgcATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTATCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACAAGCACGCCAATCGCCAGCGTCGAACTaga                                             >  2:3784123/1‑140 (MQ=255)
                                                                                         gctgcATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTaga                                             <  2:2076214/140‑1 (MQ=255)
                                                                                         gctgcATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTaga                                             <  1:2431139/140‑1 (MQ=255)
                                                                                                 gCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTaa                                     >  1:2023188/1‑140 (MQ=255)
                                                                                                  cTGACATTTACGCCAGCAATGCAACGTCAATGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGGATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCTCGCCAATCGCCAGCGTCGAACTCGAGAAGCTAAg                                    >  2:6333122/1‑140 (MQ=255)
                                                                                                   tGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAgg                                   >  1:2176699/1‑140 (MQ=255)
                                                                                                     aCATTTACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGcc                                 >  2:4024707/1‑140 (MQ=255)
                                                                                                        tttACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTc                              <  1:3049895/140‑1 (MQ=255)
                                                                                                        attACGCCAGCACGGCAACGTCAAAGAACCTTCTAGACCCAACGATAACCGTCGCCCCATAGTAGCACGGTTAGGGCGAGCAGCACTTCCCGCACCAGCACGCCAAGCGCCAGCGTCGAACTAGAGACGCTAAGGCCTTc                              <  2:2648513/139‑1 (MQ=255)
                                                                                                         ttACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTcc                             <  2:5529559/140‑1 (MQ=255)
                                                                                                          tACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGTGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCct                            >  2:2773770/1‑140 (MQ=255)
                                                                                                          tACGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCct                            <  2:3128556/140‑1 (MQ=255)
                                                                                                          aaCGCCAGCAATGCAACGTCAAAGACCTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGAAGCACATCCAGTACCAGCACGCCAAACGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTcca                            <  2:4811876/139‑2 (MQ=255)
                                                                                                           aCGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACAAACTATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCctc                           <  1:545356/140‑1 (MQ=255)
                                                                                                            cGCCAGCAATGCAACGTCAAAGAACTTTCTAGAACa                                                                                                                                  >  2:1665878/1‑36 (MQ=255)
                                                                                                                aGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTttgt                      <  1:1564947/140‑1 (MQ=255)
                                                                                                                aGCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACGTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTttgt                      <  1:1261330/140‑1 (MQ=255)
                                                                                                                 gCAATGCAACGTCATAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCATCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTttgtt                     <  2:4388607/140‑1 (MQ=255)
                                                                                                                 gCAATGCAACGTCAAAGAACTTTCTAGAACAACCGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTttgtt                     <  1:1899674/140‑1 (MQ=255)
                                                                                                                 gCAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTAAAACGGTTCGCGCGAGCAGCACTTCCAGTACCAGCACGCCACTCGCCAGCGTCGAACTCGCGAAGCTAAGGCCTTCCTCTttgtt                     >  2:5983233/1‑140 (MQ=255)
                                                                                                                  cAATGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTttgttg                    <  1:3291953/140‑1 (MQ=255)
                                                                                                                   caTGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGa                   <  2:3261777/139‑1 (MQ=255)
                                                                                                                   aaTGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGa                   <  2:2288215/140‑1 (MQ=255)
                                                                                                                   aaTGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGa                   <  1:402497/140‑1 (MQ=255)
                                                                                                                    aTGCAACGTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGat                  <  1:2314438/140‑1 (MQ=255)
                                                                                                                           gTCAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAgg           <  1:47383/140‑1 (MQ=255)
                                                                                                                             cAAAGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGaa         >  1:3108392/1‑140 (MQ=255)
                                                                                                                                aGAACTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCt      <  1:5213980/140‑1 (MQ=255)
                                                                                                                                aGAACTTTCTAGAACAAACGATAACCCTAGCCCCATAGTCTAACGGTTAGGGCGAGCAGCACTTCCAGTACCACCACGCCAATCGCCAGCGTCGACCGAGCGAAGCTAAGGCCTTCCTCTTTGTTGATATACAGGAAGCt      <  2:4708648/140‑1 (MQ=255)
                                                                                                                                    cTTTCTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGATAGGGCGAGCAGCTCTTCGAGTACCAGCGCGCCAATCGCCCGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGTGATTCAGGAAGCTCggc  >  2:2464312/1‑139 (MQ=255)
                                                                                                                                        |                                                                                                                                       
CGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGTGAGGAAATGCTGCATTGCTGACATTTACGCCAGCAATGCAACGTCAAAGAACTTTTTAGAACAAACGATAACCGTAGCCCCATAGTATAACGGTTAGGGCGAGCAGCACTTCCAGTACCAGCACGCCAATCGCCAGCGTCGAACTAGAGAAGCTAAGGCCTTCCTCTTTGTTGATATTCAGGAAGCTCGGA  >  NZ_CP025268/2228943‑2229214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑