Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 30,617 C→T P322P (CCC→CCT)  carA → glutamine‑hydrolyzing carbamoyl‑phosphate synthase small subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP02526830,6170CT100.0% 1431.2 / NA 366P322P (CCC→CCT) carAglutamine‑hydrolyzing carbamoyl‑phosphate synthase small subunit
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (149/217);  total (149/217)

Only 100 of 368 total aligned reads displayed.

CTGGCGAGCGGTGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCCGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGACGCCGCGCCGTTGTTCGACC  >  NZ_CP025268/30480‑30756
                                                                                                                                         |                                                                                                                                           
 tggcgAGCGGTGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTACTGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCa                                                                                                                                          <  2:4460129/140‑1 (MQ=255)
 tggcgAGCGGTGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCa                                                                                                                                          >  1:286048/1‑140 (MQ=255)
    cgAGCGGTGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAAc                                                                                                                                       >  1:4104033/1‑140 (MQ=255)
       gCGGTGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTg                                                                                                                                    >  2:2065450/1‑140 (MQ=255)
        cGGTGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGc                                                                                                                                   >  1:626303/1‑140 (MQ=255)
           tGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTAAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCgtg                                                                                                                                <  2:3741062/140‑1 (MQ=255)
              gAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCa                                                                                                                             <  2:6259952/140‑1 (MQ=255)
                    tGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATa                                                                                                                       >  1:388746/1‑140 (MQ=255)
                    tGTCAAAAGGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGGAATGATCACCGCCCAGAACCACGGATTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATa                                                                                                                       <  2:5288097/140‑1 (MQ=255)
                     gTCAAAATGAAATTTGGTCACCCCGGCGGCAACCATCCGGGTAAAGATGTGGAGAAACACGTGGTAATGATCACCGCCCAGAACCACGGTTGTGCGGTGGACGAAGCACCAGTACCTGCATACCTGCGGGTCACGCAtca                                                                                                                      >  2:2773778/1‑138 (MQ=255)
                     gTCAAAATGAAATTTGGTCACCACGGCGGCACCCATCCGGTTAAAGATGTGGAGAAAATCGTGGTACTGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGTAGCAACATTACATGCAATCCTGCGTGTCACGCATaa                                                                                                                      >  2:6351561/1‑140 (MQ=255)
                     gTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATaa                                                                                                                      >  2:5140249/1‑140 (MQ=255)
                     gTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATaa                                                                                                                      >  1:4677737/1‑140 (MQ=255)
                     gTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGAGGAGAAAAACGTGGTAATGATCACCGCCAAGAACCACGGTTTTGAGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATaa                                                                                                                      >  1:4893662/1‑140 (MQ=255)
                     gTCAAAATGAAATTAGGTCACAACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATaa                                                                                                                      >  1:1991260/1‑140 (MQ=255)
                      tCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTACTGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATcaa                                                                                                                     >  2:3917187/1‑140 (MQ=255)
                       cAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCAc                                                                                                                            >  1:1779574/1‑132 (MQ=255)
                         aaaTGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATcc                                                                                                                  <  2:1225805/140‑1 (MQ=255)
                            tGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTg                                                                                                               >  1:3029216/1‑140 (MQ=255)
                             gAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGAGGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGt                                                                                                              <  1:1949311/140‑1 (MQ=255)
                              aaaTTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGtt                                                                                                             >  1:5166873/1‑140 (MQ=255)
                                 tttGGTCACCACGGCGGCACCCATCGGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCGGCGTGTCACGCATACAGCCCTGTTCgc                                                                                                          <  2:4109808/140‑2 (MQ=255)
                                 tttGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGa                                                                                                          <  1:2919908/140‑1 (MQ=255)
                                 tttGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGa                                                                                                          <  2:4012713/140‑1 (MQ=255)
                                 tttGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGa                                                                                                          <  2:296779/140‑1 (MQ=255)
                                 tttGGTAACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACTTGGTAATGATCACAGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCATGTTCGa                                                                                                          <  2:3485282/140‑1 (MQ=255)
                                 ctggggcaccccGGCCGCCACCCGCCGGGTATAGATGTGGCGAACAACGGGGTCATGATCACCGCCCAGAACCACGGTTTTGCGGGGGCCGACGCAACATTACCTGCAAACCGGCGTGTCACGCATAAATCCCTGTTCGa                                                                                                          <  2:5865736/134‑1 (MQ=255)
                                   tGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACg                                                                                                        <  1:3613316/140‑1 (MQ=255)
                                   tGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACg                                                                                                        <  2:1636718/140‑1 (MQ=255)
                                     gTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGt                                                                                                      <  2:4170881/140‑1 (MQ=255)
                                     gTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGt                                                                                                      <  2:4606578/140‑1 (MQ=255)
                                      tCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTa                                                                                                     <  2:4423114/140‑1 (MQ=255)
                                      tCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTa                                                                                                     <  2:2559394/140‑1 (MQ=255)
                                          cacGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGtt                                                                                                 <  1:4007356/140‑1 (MQ=255)
                                          cacGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGtt                                                                                                 >  2:2229083/1‑140 (MQ=255)
                                             ggcggcAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACa                                                                                              <  1:496906/140‑1 (MQ=255)
                                                 gcAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGc                                                                                          <  1:6222422/140‑1 (MQ=255)
                                                 gcAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGc                                                                                          <  1:105573/140‑1 (MQ=255)
                                                 gcAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGc                                                                                          <  1:167050/140‑1 (MQ=255)
                                                    aCCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCAtt                                                                                       >  2:6029366/1‑140 (MQ=255)
                                                        tCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATc                                                                                   >  2:1452773/1‑140 (MQ=255)
                                                         ccGGTTACAGCTGTGGCGAAACACGGGGGAATGATCCCCGCCCAGAACCCCGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCAGAAATCCCTGTACGACGGTACGTTACAGGGCATTCATCg                                                                                  <  2:1293764/140‑1 (MQ=255)
                                                         ccGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCg                                                                                  <  2:1052409/140‑1 (MQ=255)
                                                            gTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCAc                                                                               >  2:4762312/1‑140 (MQ=255)
                                                             ttAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCAcc                                                                              >  2:1099734/1‑140 (MQ=255)
                                                                 aGATGTGGAGAAAAACGTGGTAATGCTCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAACTCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATa                                                                          <  2:379654/140‑1 (MQ=255)
                                                                   aTGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATaaa                                                                        <  1:2525580/140‑1 (MQ=255)
                                                                      tgGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAATTCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATACACCg                                                                     >  2:4375708/1‑140 (MQ=255)
                                                                      tgGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCg                                                                     <  1:5804273/140‑1 (MQ=255)
                                                                      tgGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCg                                                                     >  2:3404937/1‑140 (MQ=255)
                                                                        gagaCACACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACCTTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGc                                                                   <  2:1409905/140‑1 (MQ=255)
                                                                           aaaaaCGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCAtt                                                                <  1:3341347/140‑1 (MQ=255)
                                                                             aaaCGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCa                                                              <  1:3268092/140‑1 (MQ=255)
                                                                             aaaCGTGGTAAGGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCa                                                              <  2:3931038/140‑1 (MQ=255)
                                                                                cGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCt                                                           <  1:3183344/140‑1 (MQ=255)
                                                                                  tGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACa                                                                                              <  1:13966/103‑1 (MQ=255)
                                                                                  tGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTc                                                         >  2:876722/1‑140 (MQ=255)
                                                                                  tGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTc                                                         <  2:5375839/140‑1 (MQ=255)
                                                                                   ggTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTcc                                                        >  1:1420042/1‑140 (MQ=255)
                                                                                        tGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAgggg                                                   <  2:1769159/140‑1 (MQ=255)
                                                                                        tGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAgggg                                                   <  1:1310598/140‑1 (MQ=255)
                                                                                         gATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAACTCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGc                                                  <  2:4224269/140‑1 (MQ=255)
                                                                                          aTCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCa                                                 >  1:1467379/1‑140 (MQ=255)
                                                                                             aCCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCAccc                                              >  1:6420556/1‑140 (MQ=255)
                                                                                              ccGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGCCGGTACGTTACAGGGCATTCATCGCACCGATAACCCGGCAGTCAGCTTCCAGGGGCACCCt                                             <  1:5510122/140‑1 (MQ=255)
                                                                                               cGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTg                                            >  2:5339913/1‑140 (MQ=255)
                                                                                               cGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTg                                            >  1:5065016/1‑140 (MQ=255)
                                                                                                 cccAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGaa                                          >  1:102092/1‑140 (MQ=255)
                                                                                                 cccAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGaa                                          >  2:1030884/1‑140 (MQ=255)
                                                                                                 cccAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGaa                                          >  2:2387418/1‑140 (MQ=255)
                                                                                                   cAGCACCACGGTTTTGCGGAGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagc                                        <  1:5889147/140‑1 (MQ=255)
                                                                                                   cAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagc                                        <  1:315186/140‑1 (MQ=255)
                                                                                                   cAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagc                                        <  1:3542346/140‑1 (MQ=255)
                                                                                                    aGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagcc                                       >  2:1856834/1‑140 (MQ=255)
                                                                                                    aGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagcc                                       >  1:2411251/1‑140 (MQ=255)
                                                                                                      aaCCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagccag                                     >  1:1190794/1‑140 (MQ=255)
                                                                                                      aaCCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagccag                                     >  1:4224719/1‑140 (MQ=255)
                                                                                                        ccACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAACTCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagccagcc                                   <  2:4683444/140‑1 (MQ=255)
                                                                                                        ccACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagccagcc                                   <  2:5539134/140‑1 (MQ=255)
                                                                                                        ccACGGTTTTGCGGTGGACGAAGCAACATGACCTGCAAACCTGCGTGTCACGCATACATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAagccagcc                                   <  2:5636188/140‑1 (MQ=255)
                                                                                                         cACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGccc                                  <  2:2851840/140‑1 (MQ=255)
                                                                                                         cACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGccc                                  <  1:3931800/140‑1 (MQ=255)
                                                                                                           cGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTg                                >  1:2363858/1‑140 (MQ=255)
                                                                                                            ggTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGACGCCAGCCCTgg                               >  2:6124172/1‑140 (MQ=255)
                                                                                                            ggTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTgg                               >  1:3101153/1‑140 (MQ=255)
                                                                                                             gTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGt                              <  1:715445/140‑1 (MQ=255)
                                                                                                             gTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGt                              <  1:5406117/140‑1 (MQ=255)
                                                                                                                ttGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTNGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCca                           >  1:5685041/1‑140 (MQ=255)
                                                                                                                ttGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCca                           >  1:4316647/1‑140 (MQ=255)
                                                                                                                  gCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCcaca                         <  2:637288/140‑1 (MQ=255)
                                                                                                                      tGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACacgac                     >  1:2762224/1‑140 (MQ=255)
                                                                                                                        gACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGAcgc                   >  2:3220783/1‑140 (MQ=255)
                                                                                                                        gACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGAcgc                   <  1:2327513/140‑1 (MQ=255)
                                                                                                                          cGAAGCAACATGACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGAcgccg                 <  1:4186921/140‑1 (MQ=255)
                                                                                                                             aGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGAcgccgcgc              >  1:5990735/1‑140 (MQ=255)
                                                                                                                             aGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGAcgccgcgc              <  2:4888233/140‑1 (MQ=255)
                                                                                                                                aaCATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGACGCCGCGCCgt           <  1:3785378/140‑1 (MQ=255)
                                                                                                                                  cATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGACGCCGCGCCgttg         >  2:3628559/1‑140 (MQ=255)
                                                                                                                                   aTTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGACGCCGCGCCgttgt        <  2:3711464/140‑1 (MQ=255)
                                                                                                                                     tACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGACGCCGCGCCGTTGTTc      <  1:4762312/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                           
CTGGCGAGCGGTGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCCGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGACGCCGCGCCGTTGTTCGACC  >  NZ_CP025268/30480‑30756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑