BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,188,274	A→G	T63T (ACA→ACG)	CXP41_RS16625 →	fimbrial biogenesis outer membrane usher protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,188,274	0	A	G	100.0%	1007.6 / NA	290	T63T (ACA→ACG)	CXP41_RS16625	fimbrial biogenesis outer membrane usher protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (97/193); total (97/193)

Only 100 of 290 total aligned reads displayed.

GCTTATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACACCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTT  >  NZ_CP025268/3188137‑3188410

   tATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAt                                                                                                                                     <  1:5483995/140‑1 (MQ=255)

   tATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAt                                                                                                                                     >  1:2006299/1‑140 (MQ=255)

   tATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAt                                                                                                                                     <  2:1487133/140‑1 (MQ=255)

     tGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAtac                                                                                                                                   >  2:6189379/1‑138 (MQ=255)

        cGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCACTTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCAcc                                                                                                                                <  2:1195912/140‑1 (MQ=255)

        cGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCAcc                                                                                                                                <  1:210312/140‑1 (MQ=255)

          ttGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCtt                                                                                                                              <  1:44032/140‑1 (MQ=255)

          ttGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCtt                                                                                                                              >  1:6201726/1‑140 (MQ=255)

          ttGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCtt                                                                                                                              >  1:4469305/1‑140 (MQ=255)

          ttGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCtt                                                                                                                              <  1:5525095/140‑1 (MQ=255)

          ttGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCtt                                                                                                                              >  1:4851884/1‑140 (MQ=255)

          ttGAATTCAACAAAGATTAAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCtt                                                                                                                              >  1:820503/1‑140 (MQ=255)

           tGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTg                                                                                                                             >  1:5786220/1‑140 (MQ=255)

           tGAATTAAACAAAGAATTAATCGAAGCCGAAGATCTTGAAAAAGTTAAACTTTCCCAATTTGAAAATGATGGCCAATTACCAGTCTGAAAATATTCACTAAGCAATCTGATTAATAATAAGAGGAAGACAATCCACCttt                                                                                                                             <  2:516862/140‑2 (MQ=255)

            gAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGa                                                                                                                            <  1:4267106/140‑1 (MQ=255)

             aaTTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGAc                                                                                                                           <  2:1938694/140‑1 (MQ=255)

             aaTTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGAc                                                                                                                           <  1:6158425/140‑1 (MQ=255)

               ttCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCt                                                                                                                         <  1:3848282/140‑1 (MQ=255)

               ttCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCt                                                                                                                         >  2:79343/1‑140 (MQ=255)

                  aacaaAGATTTAATCGAAGCCGAAGCTCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCa                                                                                                                      <  1:451912/140‑1 (MQ=255)

                  aacaaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCa                                                                                                                      >  1:5045605/1‑140 (MQ=255)

                   acaaAGATTTAATCGACGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCaa                                                                                                                     <  1:1812520/140‑1 (MQ=255)

                   acaaAGATTTAATCGAAGCCGAAGATTGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCTCCTTGACCTCCaa                                                                                                                     <  1:5656600/140‑1 (MQ=255)

                   acaaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCTGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCaa                                                                                                                     <  1:2995949/140‑1 (MQ=255)

                   acaaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCaa                                                                                                                     <  1:1094944/140‑1 (MQ=255)

                   acaaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCaa                                                                                                                     <  1:2707274/140‑1 (MQ=255)

                   acaaACATTTCATAGAAGCCGAAGATCGTGAAAACGATAACCTTTCCCAATTTGAAACTGATGGCCAATTAACCGTCTGCAAATATACAATAAGCACACTGATTAATAATAATAGTACGCCAATCCACCTTGACCTCCaa                                                                                                                     <  2:3153527/140‑1 (MQ=255)

                    caaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTCACCTTGCCCAATGTGACACTGATTGCAAAGTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAAt                                                                                                                    <  2:16120/140‑1 (MQ=255)

                    caaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAAt                                                                                                                    <  2:1731015/140‑1 (MQ=255)

                    caaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAAt                                                                                                                    >  2:5618436/1‑140 (MQ=255)

                    caaAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAAt                                                                                                                    <  2:1108552/140‑1 (MQ=255)

                     aaaGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATg                                                                                                                   <  2:4618386/140‑1 (MQ=255)

                     aaaGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATg                                                                                                                   <  2:5742186/140‑1 (MQ=255)

                     aaaGATTTAATCGAAGCCGAAGATCGTGAAAACGTGAACCTTTCCCAATTTGAAACTGATGGCCAATGACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATg                                                                                                                   <  2:3068502/140‑1 (MQ=255)

                         aTTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTa                                                                                                               >  1:633564/1‑140 (MQ=255)

                          tttAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTAt                                                                                                              <  2:5097043/140‑1 (MQ=255)

                          tttAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTAt                                                                                                              <  2:3362220/140‑1 (MQ=255)

                           ttAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTAtt                                                                                                             <  1:1253425/140‑1 (MQ=255)

                           ttAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTAtt                                                                                                             <  1:5272346/140‑1 (MQ=255)

                            tAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTa                                                                                                            >  1:6028936/1‑140 (MQ=255)

                               tCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCACTTTGAAACTGATGGCCACTTACCCGTCGGCAAATAGTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAAtt                                                                                                         <  2:4052328/140‑1 (MQ=255)

                                  aaGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGAt                                                                                                      <  1:3436243/140‑1 (MQ=255)

                                    gCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATaa                                                                                                    <  2:2168771/140‑1 (MQ=255)

                                             cGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGc                                                                                           >  1:1444362/1‑140 (MQ=255)

                                              gTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCa                                                                                          <  1:4938632/140‑1 (MQ=255)

                                              gTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAAACAAACTGCa                                                                                          <  2:2402374/140‑1 (MQ=255)

                                               tGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAg                                                                                         >  2:2261952/1‑140 (MQ=255)

                                               tGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAg                                                                                         >  1:4600929/1‑140 (MQ=255)

                                                gAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGt                                                                                        <  1:2411733/140‑1 (MQ=255)

                                                gAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGt                                                                                        <  1:542197/140‑1 (MQ=255)

                                                 acaaCGTTAACCTTTCCCAATTAGACACTGAGCGCCAATTACCAGTCGGCAACTAGTCACTAAGCAATCTGAAGTATAATAAGACGACGCCAATACACCTTGAACTCCAATGGGTTTTAATTGATCACCTAACTGCAGtt                                                                                       <  2:6272440/138‑1 (MQ=255)

                                                     cGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCg                                                                                   <  1:2146514/140‑1 (MQ=255)

                                                     cGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTGTGCg                                                                                   <  1:5806806/140‑1 (MQ=255)

                                                      gTTAACCTTTCCCATTTTGAAACTGATGGCCAATTTCACGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAAACCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGt                                                                                  <  2:4114173/140‑1 (MQ=255)

                                                      gTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGt                                                                                  <  1:1595752/140‑1 (MQ=255)

                                                         aaCCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCAGCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGac                                                                               >  1:2891648/1‑140 (MQ=255)

                                                           ccTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGacac                                                                             <  1:3071461/140‑1 (MQ=255)

                                                             tttCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAATCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCa                                                                           <  2:2988951/140‑1 (MQ=255)

                                                             tttCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCa                                                                           <  1:81775/140‑1 (MQ=255)

                                                                cccAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCagag                                                                        <  1:2334956/140‑1 (MQ=255)

                                                                    aTTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAAt                                                                    <  1:626417/140‑1 (MQ=255)

                                                                     tttGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAAtt                                                                   <  2:18634/140‑1 (MQ=255)

                                                                     tttGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCATGACCTCCAATGGGTATTAATTTATAACCAAACTGCAGTTTGCGTGACACCAGAGCCAtt                                                                   <  2:1051336/140‑1 (MQ=255)

                                                                      ttGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCCATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTa                                                                  >  2:1352530/1‑140 (MQ=255)

                                                                       tGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTaa                                                                 <  2:5295439/140‑1 (MQ=255)

                                                                       tGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTaa                                                                 <  2:3336340/140‑1 (MQ=255)

                                                                       tGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTaa                                                                 <  1:3119/140‑1 (MQ=255)

                                                                       tGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTaa                                                                 <  1:3322071/140‑1 (MQ=255)

                                                                       tGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCACCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTaa                                                                 <  2:3017357/140‑1 (MQ=255)

                                                                            cTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACatta                                                            <  1:6457030/140‑1 (MQ=255)

                                                                            cTGATGGCCAATTACCAGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGATGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACatta                                                            <  1:3500276/140‑1 (MQ=255)

                                                                             tGATGGCCACTTACCCGTCGGCAAATATTCACTAAGCACTCTGATTACTAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACattat                                                           <  1:2784596/140‑1 (MQ=255)

                                                                             tGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACattat                                                           <  1:1762188/140‑1 (MQ=255)

                                                                              gATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACattatt                                                          <  1:373133/140‑1 (MQ=255)

                                                                               aTGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACAttatta                                                         >  1:3401534/1‑140 (MQ=255)

                                                                                 ggCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAgg                                                       <  1:5851575/140‑1 (MQ=255)

                                                                                      aTTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTa                                                  <  2:2728202/140‑1 (MQ=255)

                                                                                         aCCCGTCTTCAAATAATAACTAAGCACTCATATTAATAATAAGAGAAAGCCAATAAAAATTGACCACCAATTGGAATTAATTTATAACCAAACTTAAGTTTGCGTGACACCAGAGCAATTAACATAATTAGTATTTACtg                                               >  2:5952618/1‑140 (MQ=255)

                                                                                            cGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACtgatg                                            >  2:2924604/1‑140 (MQ=255)

                                                                                                 gCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAAttt                                       >  2:4378156/1‑140 (MQ=255)

                                                                                                 gCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAAttt                                       <  2:5390608/140‑1 (MQ=255)

                                                                                                           aCTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGaaaaaa                             <  2:3601229/140‑1 (MQ=255)

                                                                                                           aCTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTGGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGaaaaaa                             <  2:4845404/140‑1 (MQ=255)

                                                                                                               aGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCa                         >  2:6085917/1‑140 (MQ=255)

                                                                                                               aGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACAAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCa                         >  2:1833134/1‑140 (MQ=255)

                                                                                                                      tGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGACGAATTTATTGAAAAAACTCAGCAAAAc                  <  2:3486299/140‑1 (MQ=255)

                                                                                                                       gaataataataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATAAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAAcc                 <  2:3966363/137‑1 (MQ=255)

                                                                                                                       gATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACattatt                                                          <  1:692543/99‑1 (MQ=255)

                                                                                                                       gATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAAcc                 >  1:3458865/1‑140 (MQ=255)

                                                                                                                         ttAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTg               >  1:365528/1‑140 (MQ=255)

                                                                                                                         ttAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTg               <  2:5021193/140‑1 (MQ=255)

                                                                                                                          taataataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGa              <  2:684548/140‑1 (MQ=255)

                                                                                                                              aataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTATTTGATAACCTAACTGCAGTTTGCGTGACACCCGTGCAATTAACATTATTATGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGa          <  2:5496795/140‑1 (MQ=255)

                                                                                                                              aataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGa          <  2:2794011/140‑1 (MQ=255)

                                                                                                                              aataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGa          <  1:101411/140‑1 (MQ=255)

                                                                                                                               ataaGAGTACGCAAATCCACCTTGACCTCCAATGGCTATTAATTGATAACCAAACTGCAGTTTGCTTGACAACAGATCAATTAACATTATTAGTATTGACTGATGAATTTATTGAAAATACTCAGCAAAAACTGATCGAt         <  2:3787808/140‑1 (MQ=255)

                                                                                                                               ataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGAt         <  2:2686392/140‑1 (MQ=255)

                                                                                                                               ataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGAt         <  2:2527143/140‑1 (MQ=255)

                                                                                                                               ataaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGAt         <  1:2641400/140‑1 (MQ=255)

                                                                                                                                taaGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATg        >  2:1453040/1‑140 (MQ=255)

GCTTATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACACCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTT  >  NZ_CP025268/3188137‑3188410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`