| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,392,785 | C→T | intergenic (‑72/+358) | tldD ← / ← yhdP | metalloprotease TldD/AsmA2 domain‑containing protein YhdP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,392,785 | 0 | C | T | 98.7% | 1368.8 / NA | 403 | intergenic (‑72/+358) | tldD/yhdP | metalloprotease TldD/AsmA2 domain‑containing protein YhdP |
| Reads supporting (aligned to +/- strand): ref base C (0/2); major base T (148/243); minor base A (0/5); total (148/255) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 404 total aligned reads displayed.
GAACAAGTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTACCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCAC > NZ_CP025268/3392648‑3392921 | aaCAAGTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCa < 2:5491493/140‑1 (MQ=255) aaCAAGTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCa < 2:454002/140‑1 (MQ=255) cAAGTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGc < 1:2255079/140‑1 (MQ=255) cAAGTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAAGTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGc < 1:927370/140‑1 (MQ=255) aaGTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGcc > 2:2628879/1‑140 (MQ=255) gTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTa < 1:1008813/140‑1 (MQ=255) gTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTa < 2:5622334/140‑1 (MQ=255) gTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTa > 1:1879867/1‑140 (MQ=255) gATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGtt < 2:4848909/140‑1 (MQ=255) aTGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTa > 2:6309475/1‑140 (MQ=255) aTGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCATATCCGACCTACGGTTa > 2:726777/1‑140 (MQ=255) gTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATGTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATg > 1:6390530/1‑140 (MQ=255) ttCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGGTATGtt > 1:1204767/1‑140 (MQ=255) tCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTc > 2:2781613/1‑140 (MQ=255) tCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGGTATGTTc > 2:1090719/1‑140 (MQ=255) cAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTcc < 1:2500831/140‑1 (MQ=255) cAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTcc < 1:754242/140‑1 (MQ=255) aGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCg < 1:3660044/140‑1 (MQ=255) aGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCg < 1:355678/140‑1 (MQ=255) aGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCg < 2:1422116/140‑1 (MQ=255) aGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCg < 1:3128448/140‑1 (MQ=255) aGGCCGTTCGACGCTATCAATTGTTCACTTAACTGTTTAAGTCTCATCGTTTTTGCTAATAGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTTTGTTCCg < 2:4358517/140‑1 (MQ=37) gCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGt > 1:4512630/1‑140 (MQ=255) gTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTg < 1:269289/140‑1 (MQ=255) gTTCGCCGCTAGCAATTGTTAACTTACCATGATTAGACTCATCGTTTTATCTACTAGTTTTTTAGTGGTGTAGAGGATTTGTTTCTGCTGCCGGTTGCTTCGTGAAATCCATATCGAGCCTACGGTTATGTTCCGTTTTg < 2:3288160/140‑1 (MQ=255) gTTCGCCGCGAGCAATTGTTCACTTACCAGGGTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTGTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTg < 2:5964741/140‑1 (MQ=255) ttCGCCGCTAGCAATTGTTCACTTACCANGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑t < 1:5661956/140‑1 (MQ=255) tCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑t < 1:2950044/139‑1 (MQ=255) tCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑Ta > 2:4679511/1‑140 (MQ=255) tCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑Ta > 1:5191720/1‑140 (MQ=255) tCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑Ta < 2:1958457/140‑1 (MQ=255) tCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGGTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑Ta > 2:5347146/1‑140 (MQ=255) cgccgcTAGCAATTGTTCACTGACCAGGTTAAGACTCAGCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAg < 2:5799534/140‑1 (MQ=255) cgcTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGcc < 2:3876888/140‑1 (MQ=255) aaTTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAg < 1:6092728/140‑1 (MQ=255) tGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACg > 2:2236233/1‑140 (MQ=255) ttCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCCGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGca > 1:2767915/1‑140 (MQ=255) ttCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGca < 2:5217689/140‑1 (MQ=255) ttCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGca < 2:640213/140‑1 (MQ=255) ttCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGAGAACGCCCTATCCAGCCAACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGca > 1:4671567/1‑140 (MQ=255) cACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGcaca > 1:5359245/1‑140 (MQ=255) ttACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCg < 2:4182844/140‑1 (MQ=255) gtACCAGGTTCAGACTCATCGTTTTTGCGACTCGGTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCg < 2:3385282/139‑1 (MQ=255) aCCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTc > 1:1235491/1‑140 (MQ=255) aGGTTACGACTCATGGTTTTTGCTACTGGTTAGTTAGTGCAGTAGTGGATTTTTTACGGGGGCGGGAGGCGGCGTGAACGCCCTATCCAGCCTACGGTTAGGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCa < 2:3447730/140‑1 (MQ=25) aGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCa > 1:2426384/1‑140 (MQ=255) ggTTACGACTCCCCGTTTTGGCTACTCGTAAGTTACGGCAGGAGAGGATTTTTTCCGGCTGCCGGATGCGGCGTGAACGCCCGATCCAGCCTACGGTTATGTTCCGGTTTG‑TCGGCCTGATAAGACGCACAGCGTCGCAt < 2:3048940/140‑1 (MQ=21) aaGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCATCCTACGGTTATGTTCAGGATAG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAgg > 1:1571365/1‑140 (MQ=25) aaGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAgg > 1:3737703/1‑140 (MQ=255) aaGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAgg > 2:1885041/1‑140 (MQ=255) aaGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGAAAATACGCACAGCGTCGCAACacc > 2:5885162/1‑138 (MQ=37) gACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCa > 2:4238056/1‑140 (MQ=255) aCTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCaa < 2:3512229/140‑1 (MQ=255) aCTAATCGTTTTTGATACTCGTTAGTTACTGATTTTGTGGATTTTTTACGGCTGCCGGATGCGGCGTTAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCaa < 2:498037/140‑1 (MQ=18) aTCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCGCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGc > 1:5960325/1‑140 (MQ=255) aTCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGTTACGACGCACAGCGTCGCATCAGGCACCGGc > 2:1680094/1‑140 (MQ=255) aTCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGc > 1:2156942/1‑140 (MQ=255) aTCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGc > 2:1467548/1‑140 (MQ=255) aTCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGc > 1:6457064/1‑140 (MQ=255) aTCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCATATCCATCCTACGGTTATGTTCCGGTTAG‑TTGGCCTGTTAAGACGAAAATCGTAGCATAAGGCAACggg > 2:5995609/1‑139 (MQ=21) tGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGGCCTACGGTTATGTTCCGGTTTG‑AAGGCCTGATACTACGAAAATCGTCGCATCTGGCACCGGATGACGGag > 2:4364392/1‑139 (MQ=21) cTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACCGCGTCGCATCAGGCAACGGCTGTCGGATgcggc < 1:4447322/140‑1 (MQ=255) gttagttaCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGTTTATGTTCCGGTTTG‑TTGGCCGGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTa < 2:1009170/140‑1 (MQ=255) agttaCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAAc > 1:4751702/1‑140 (MQ=255) aCTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCt > 1:5881931/1‑140 (MQ=255) cTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCtt > 1:6208950/1‑140 (MQ=255) gCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATACGACGCACATCGTCGCAGCAGGCAACGGCTGACGGATGCGGCGTAAACGCCTGAt > 2:833674/1‑140 (MQ=18) gCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTAGGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTAt < 2:1199050/140‑1 (MQ=255) gCAGTAGAGGATTTTTGACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGAATCCGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTAt < 1:4176949/140‑1 (MQ=255) cAGTCGCGGATTTTTTCCGGCTGCCGGAGGCGGCGTGAACGCCCTACCCAGCCTACGGTTATGTGCCGGTTTG‑TAGGCCTGATAAGACGCACCGCGTCGCATCTGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATc < 1:3058669/140‑1 (MQ=18) cAGTAGTGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACCGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATc < 1:633168/140‑1 (MQ=255) gTAGAGGATTTTTTCCGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGTTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCg < 2:1378208/140‑1 (MQ=255) gTAGAGGATTTTTTCCGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCATACGTTTTTG‑TCCGGTTTGTTCGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCg < 1:3871582/140‑1 (MQ=17) tAGTGGATTTTTAACGGCTGCCGGAGGGGGCGGGACCGCCCTAACCACCCTCCGTTTAGGTTCCGGTTTG‑TCGGCCTGAAAACACCCACAGCGCCGCACCTGGAAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGa < 1:1976425/140‑1 (MQ=12) agagGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGAc > 1:3490947/1‑140 (MQ=255) gcggATTTTTTACGCCTGCCGGAGGCGGCTTGACCGCCCTATCCAGCATACGTTTTTGTTCGGGTTTG‑TCGGCCTGATAAGACGCCCCGCGACGCAACAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGAcc < 1:2833929/138‑1 (MQ=17) gagGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACCGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGAcc < 1:5757667/140‑1 (MQ=255) gtaTTTTTTACGGCTGCCGGATGCGGCGTGAACGCCATATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTa < 1:5059597/138‑1 (MQ=255) ggATTTTTTCCGGCTGCCGGAGGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACCGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTa < 1:4121132/140‑1 (MQ=255) ggATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTa < 1:829323/140‑1 (MQ=255) ggATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTa < 2:5158660/140‑1 (MQ=255) ttttACGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGtt < 2:29697/140‑1 (MQ=255) tttACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAATACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTAGCCGACCTACGGTTa > 1:5277155/1‑140 (MQ=255) ccGGCTGCCGGTTGCGGCGTGACCGCCCTATCCAGCCTACGGGTTTGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCTGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGt < 1:3317302/139‑1 (MQ=14) aCGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGt < 2:1572939/140‑1 (MQ=255) cGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGtt < 1:1761128/140‑1 (MQ=255) cGGCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGtt < 2:3673381/140‑1 (MQ=255) gCTGCCGGATGCGGCGTGAACGCCCTCTCCAGCCTACGGTTATGTTCCGGTTTG‑TCGGCATGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTcc < 1:2382200/140‑1 (MQ=255) gCTGCCGGATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTcc < 2:653565/140‑1 (MQ=255) gCTGCCGGATGCGGCGTGAACGCCCAATCCAGCCTACGTTTATGTTCCGGTTTG‑TAGGCCTGAAAAGACGCACAGCGTCGCATCAGCCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTcc < 1:4325998/140‑1 (MQ=14) cGGATGCGGCGTGCCCGCCCTATCCAGCCTCCGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTg < 2:6189262/140‑1 (MQ=255) ggATGCGGCGTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGt < 2:2446583/140‑1 (MQ=255) cggcgTGAACGCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGcc < 2:2064401/140‑1 (MQ=255) cggcgTGAACGCCCTAGCCAGCCTACGGTTTTGTTCGGGTTTG‑TAGGCCTGATAAGACGCACAGCGGCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGcc < 1:4882772/140‑1 (MQ=255) gTGAACGCCCTATCCAGCCTACGGTTATGTTCGGGTTTG‑TAGGCCTGATAAGCCGCACAGCGGCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGAt < 1:3198889/140‑1 (MQ=255) gCCCTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACg < 2:3736655/140‑1 (MQ=255) ccTATCCTGACTAGGGTTTTGTTCCTGTTTG‑TTGGACTGATATGACTCACTGCGTCGCAGAAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGTCCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGca < 1:637638/140‑1 (MQ=11) ccTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTACACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGca < 2:4734526/140‑1 (MQ=255) ccTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGca < 2:3214336/140‑1 (MQ=255) cTATCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTcc > 1:5529302/1‑116 (MQ=255) | GAACAAGTCCTGATGTTTCAGGCCGTTCGCCGCTAGCAATTGTTCACTTACCAGGTTAAGACTCATCGTTTTTGCTACTCGTTAGTTACTGCAGTAGAGGATTTTTTACGGCTGCCGGATGCGGCGTGAACGCCCTACCCAGCCTACGGTTATGTTCCGGTTTG‑TAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCAC > NZ_CP025268/3392648‑3392921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |