BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	4,608,154	G→A	noncoding (48/87 nt)	CXP41_RS23870 ←	tRNA‑Leu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	4,608,154	0	G	A	95.5%	775.8 / ‑4.4	247	noncoding (48/87 nt)	CXP41_RS23870	tRNA‑Leu
Reads supporting (aligned to +/- strand): ref base G (0/2); major base A (122/111); minor base T (8/3); total (130/117)
Fisher's exact test for biased strand distribution p-value = 2.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 247 total aligned reads displayed.

CCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGC  >  NZ_CP025268/4608020‑4608290

ccACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGTACACt                                                                                                                                      >  2:3926388/1‑140 (MQ=255)

ccACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACt                                                                                                                                      <  1:6328005/140‑1 (MQ=255)

ccACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCGCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACt                                                                                                                                      >  1:1613751/1‑140 (MQ=255)

ccACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATACCGCCACCTTCGCACAGAAAAAATACTTATTAAGATATCGACTCCCTTGGGGCGAGGGGGGGGACTTGAACCCCCACGACCGTAAGTACACt                                                                                                                                      >  2:2941416/1‑140 (MQ=18)

 cACGTCCGTAAGGACACTAACACCTGAATCTAGCGCGTCTACCAATTCCGCCAACTTCGCACAGTCATCTTACATTTATAGATATAGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTa                                                                                                                                     <  2:3548206/140‑1 (MQ=25)

 cACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTAAGCTTACTTTTTTTGATATCGAAGCGATTGGTGCGAGGGGGGGGAATTGAACCACCACGTCAGTAAGAACACTa                                                                                                                                     >  1:1681276/1‑140 (MQ=21)

     tCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTTGTGCGAGGCGGGGGAGTTGAACCCCCACGTCCGTACGAACACTAagac                                                                                                                                 >  2:5770718/1‑140 (MQ=37)

      ccGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACAcc                                                                                                                                <  2:6105277/140‑1 (MQ=255)

        gTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTg                                                                                                                              >  1:3837312/1‑140 (MQ=255)

         tAAGGACACTAACACCTGAANCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGGCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTNGAACCCCNACGTCCGTAAGTACACTAACACCTGa                                                                                                                             >  1:5637904/1‑140 (MQ=255)

          aaGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGaa                                                                                                                            >  2:1983888/1‑140 (MQ=255)

              acacTAACACCTGAAGCTAGCGCGGCTGCCAATTCCGCCACCTTCGCACCGGCCTATTACTTTTTTTGATATCGCCTCGTTTGGGGCGAGGGGGGGGACTTGAACCCCGTCGTCCGTAAGAACTCTATCACCTGATGCtc                                                                                                                        >  2:5504135/1‑139 (MQ=25)

               cacTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAg                                                                                                                       <  1:3766453/140‑1 (MQ=255)

               cacGAACACCTGAAGATAGCTCGTCTACCAATTCCGCCACCTTCGCACATTCACCTTACTTTATTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAg                                                                                                                       <  2:4729550/140‑1 (MQ=25)

                acTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTAATTTGATATCCACTCGATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgc                                                                                                                      >  1:6097548/1‑140 (MQ=25)

                acTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGGCATCTTACTTTATTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgc                                                                                                                      >  2:1239764/1‑140 (MQ=255)

                 cTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgcg                                                                                                                     >  1:1761883/1‑140 (MQ=255)

                 cTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCGCTATTGGTGCGAGGGGGGGGACTTGCACCCCCACGTCCGTACGAACACTAACACCTGAAGCTAgcg                                                                                                                     >  2:2479860/1‑140 (MQ=25)

                   aaCACCTGATGCTAGCGCGTCTACCATTTCAGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGcgcg                                                                                                                   <  1:4116043/140‑1 (MQ=25)

                    acacCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACACACATCTTACTTTTTATGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTTAACCCCAACGTCCGTAAGAAAACTAACACCTGAAGCTAGCTCGt                                                                                                                  >  2:2594914/1‑140 (MQ=37)

                       ccTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTa                                                                                                               >  1:1861953/1‑140 (MQ=255)

                       ccTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTa                                                                                                               >  1:851181/1‑140 (MQ=255)

                        cTGAAGCTAGCGCGTCTACCACTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTGTGGGGCGAGGGGGGGGACTTGAACCCCCACGTCCGTTAGAACACTAACACCTGTAGCTAGCGCGTCTAc                                                                                                              >  2:1913112/1‑140 (MQ=37)

                          gAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGGGAGGGGGGGGACTTGAACCACCACGTCCGTAAGTACACTTACACCTGAAGCTAGCGCGTCTACCa                                                                                                            >  2:369472/1‑140 (MQ=255)

                           aaGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGACTCGTTTGGTGCGGGGGGGGGGCCTTGAACCCCCACGTCCTTAATAACACTAACACCTGGAGCTAGCGCGTCTAACaa                                                                                                           >  1:1146587/1‑140 (MQ=25)

                                aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCg                                                                                                      >  1:382914/1‑140 (MQ=255)

                                aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCg                                                                                                      >  1:4464245/1‑140 (MQ=255)

                                aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCg                                                                                                      >  1:4709983/1‑140 (MQ=255)

                                aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCg                                                                                                      >  1:5915701/1‑140 (MQ=255)

                                aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCg                                                                                                      >  2:486717/1‑140 (MQ=255)

                                aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCg                                                                                                      >  2:4790288/1‑140 (MQ=255)

                                 gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                     <  2:1554055/140‑1 (MQ=255)

                                 gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACATTTTTTGAAAACGCCTCGTTAGGAGCGAGGGGGGGGACTAGAACCCCCACGTCCGTAAGAACACAAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                     <  2:1802680/140‑1 (MQ=21)

                                 gcgaGTCTACATATTCCGCCACCTTCTAACAGTCAACTTACTATAATTGATATCGCCTAGATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                     <  1:4241405/140‑1 (MQ=17)

                                  cgcgTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGACCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGcc                                                                                                    >  2:1181717/1‑140 (MQ=255)

                                     gTCTACCTATTCCGCGTCCTTCGCACAGTCATCTTACTTTTTTTGATATCGCGTCGTTTGGTGCGCGGGGGGGGACTTGAACCCCCACGTCCGTAAGATCACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAcc                                                                                                 <  2:5823861/140‑1 (MQ=21)

                                     gTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAcc                                                                                                 <  1:1983888/140‑1 (MQ=255)

                                     gTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAcc                                                                                                 <  2:4397294/140‑1 (MQ=255)

                                      tCTACCAATTCCGCCACCTTCGCAAACTCATCTTACTTTTTTTGATATCGCCACGGTTGGTGCGAGGGGGGGGACTTGAACCCCAACGTCCGTAAGAAAACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCt                                                                                                >  2:1024547/1‑140 (MQ=21)

                                          ccAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGc                                                                                            <  2:4464245/140‑1 (MQ=255)

                                          ccAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGc                                                                                            <  2:3835799/140‑1 (MQ=255)

                                           cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                           <  2:2160630/140‑1 (MQ=255)

                                           cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                           <  1:2351660/140‑1 (MQ=255)

                                           cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                           <  1:3258349/140‑1 (MQ=255)

                                           cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                           <  1:2111633/140‑1 (MQ=255)

                                            aaTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTAGccc                                                                                          <  1:3743871/140‑1 (MQ=255)

                                              ttCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAg                                                                                        >  1:4761577/1‑140 (MQ=255)

                                               tCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcaaagt                                                                                       >  2:4186611/1‑135 (MQ=255)

                                               tCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGt                                                                                       <  1:5046290/140‑1 (MQ=255)

                                               tCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTGGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGt                                                                                       >  2:5669993/1‑140 (MQ=255)

                                                ccGCCACCTTCTCACATTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTg                                                                                      <  2:4096173/140‑1 (MQ=255)

                                                ccGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTg                                                                                      <  2:5282567/140‑1 (MQ=255)

                                                ccGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTg                                                                                      <  1:793775/140‑1 (MQ=255)

                                                ccGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCACGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTACCACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAgag                                                                                      <  2:923615/140‑3 (MQ=255)

                                                  gCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCg                                                                                    <  2:2585627/140‑1 (MQ=255)

                                                   ccACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGa                                                                                   >  1:4051597/1‑140 (MQ=255)

                                                   ccACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGa                                                                                   >  1:2834402/1‑140 (MQ=255)

                                                    cACCTGCGCACAGTCATCTTACTTTTATTGATCTCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                  <  2:5057371/140‑1 (MQ=255)

                                                          cGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAatat                                                                            <  1:2726717/140‑1 (MQ=255)

                                                              cattgaTCTTAATTTTTTTGAAATATCGTAGTTTGGTGGGAGGGGTGGGACTTGAACCCCCACGTCCGTAAGTACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAAc                                                                        <  2:3858164/135‑1 (MQ=17)

                                                              caGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAAc                                                                        <  1:3607564/140‑1 (MQ=255)

                                                                 tctgcTTACTTTGTTTGATATAGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTATCACCTGTAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCCGTGCGAGCGATTTCAACGTg                                                                     >  2:376698/5‑140 (MQ=18)

                                                                 tCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                           >  2:2625341/1‑118 (MQ=255)

                                                                 tCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTg                                                                     >  2:2359051/1‑140 (MQ=255)

                                                                 tCATCCTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGATCAATATCAACGTg                                                                     >  2:3494169/1‑140 (MQ=255)

                                                                         cTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCAATATCAACGTGGTTTTTgg                                                             >  1:2313687/1‑140 (MQ=255)

                                                                           ttttttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTg                                                           >  1:5855436/1‑140 (MQ=255)

                                                                           ttttttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAAAGTGGTTTTTGGTg                                                           >  2:6290568/1‑140 (MQ=255)

                                                                           ttttttGATATCGCCTCGTTTGGAGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCAGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCACTATCAACGTGGATTTTGGTg                                                           >  2:2236482/1‑140 (MQ=18)

                                                                             ttttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCg                                                         >  1:1358973/1‑140 (MQ=255)

                                                                                   tatCGCCTCGGTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCAATATCAACGTGGTTATTGGTGCGA‑ggggg                                                  >  2:244938/1‑140 (MQ=255)

                                                                                    atCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCGAGAGAGAGCACTATCAACGTGGTTTTTGGTGCGA‑gggggg                                                 >  2:3115557/1‑140 (MQ=18)

                                                                                    atCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑gggggg                                                 <  1:70023/140‑1 (MQ=255)

                                                                                     tCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑ggggggg                                                <  1:5464745/140‑1 (MQ=255)

                                                                                     tCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑ggggggg                                                <  1:2991231/140‑1 (MQ=255)

                                                                                        tcTCGTTTGGTGCGAGGTGGTGGACTTGAACCCCCAAGTCCTTAAGAACACTACCACCTGAAGCTAGCGCGTCTACCAAGTCCGACACCCACGCCCAGTGCTAGAAATATAAACGTGGTTTTTGGTGCGA‑GGGGGGGGAc                                             <  2:3379581/139‑1 (MQ=18)

                                                                                                  tGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAAccccc                                   >  1:3243795/1‑140 (MQ=255)

                                                                                                   gCGTGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCACTTCCGCCACCTTCGCCCTGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCa                                  <  2:3964230/140‑1 (MQ=255)

                                                                                                     gcggggggggACTTGCACCCCCACGTCCGTAAGACCACCACCACCCGCAGCTACCGCGTCTACCAATTCCGCCACCGACGCCCAGAGCGAGCAAGAACCACGAGGGTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACg                                <  2:1611504/138‑1 (MQ=18)

                                                                                                     gAGGGGGGGGACTAGAACCCCCACGTCCGTACGAACACTAACACCTGAAGCTATCGCGTCTACCCTTTCCGCCACCTTCGCCCAGTGCGAGGTCTATCAACTTGTTTATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACg                                <  1:2677663/140‑1 (MQ=18)

                                                                                                      aGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGt                               >  2:454427/1‑140 (MQ=255)

                                                                                                      aGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGt                               >  1:6053703/1‑140 (MQ=255)

                                                                                                       ggggggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTc                              >  2:5365818/1‑140 (MQ=255)

                                                                                                       ggggggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTc                              >  1:4611671/1‑140 (MQ=255)

                                                                                                        gggggggACTAGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCACGTCCGCCACCGTCGCCCCGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑‑GGGGGGGACTTGAACCCCCACGTCCg                            <  1:2274593/140‑1 (MQ=25)

                                                                                                           ggggACTTGCACCCCCACGTCCGTAAGAACACTACCACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTa                          <  1:2549281/140‑1 (MQ=255)

                                                                                                           ggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTa                          >  2:3359070/1‑140 (MQ=255)

                                                                                                            gggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTaa                         >  1:5414766/1‑140 (MQ=255)

                                                                                                            gggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTaa                         >  1:5414869/1‑140 (MQ=255)

                                                                                                            gggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTaa                         >  1:2660028/1‑140 (MQ=255)

                                                                                                             ggACTTTAACCCCCACCTCCGTAAGAACACTAACACCTTTAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCATTATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAg                        <  1:5195120/140‑1 (MQ=25)

                                                                                                             ggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGAAAg                        >  1:5554337/1‑140 (MQ=255)

                                                                                                               aCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGa                      <  1:6228561/140‑1 (MQ=255)

                                                                                                                  tGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGGACTTGAACCCCCACGTCCGTAAGGaca                    <  2:789511/140‑1 (MQ=255)

                                                                                                                   gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  <  1:5615531/140‑1 (MQ=255)

                                                                                                                   gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAAAGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  >  1:1232712/1‑140 (MQ=255)

                                                                                                                    aaCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCACAGAGAGCAATATCAACGTGTTGGTTGGAGCGA‑GGGGGGGTACATGAAGAAACACGTCAGTAAGGACACTa                 >  1:3562111/1‑140 (MQ=18)

                                                                                                                        cccACGTCCGTAAGAACACTAACACCTGAAGCTAGCTCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAATGAAACTAacac             >  1:3940607/1‑140 (MQ=255)

                                                                                                                                 gTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTa    >  1:944422/1‑140 (MQ=255)

                                                                                                                                   aaGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAgc  >  1:4413106/1‑140 (MQ=255)

CCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGC  >  NZ_CP025268/4608020‑4608290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`