| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 485,691 | C→T | P36S (CCA→TCA) | mscK → | mechanosensitive channel MscK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 485,691 | 0 | C | T | 99.7% | 1209.7 / NA | 311 | P36S (CCA→TCA) | mscK | mechanosensitive channel MscK |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (161/148); minor base A (1/0); total (163/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 311 total aligned reads displayed.
TCGTTCTTCAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCACCCTCGATAAAA > NZ_CP025268/485554‑485826 | tCGTTCTTCAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCa < 2:4942793/140‑1 (MQ=255) gTTCTTCAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATc < 1:436853/140‑1 (MQ=255) gTTCTTCAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATc < 2:4856428/140‑1 (MQ=255) ttcttcAGGTTCAGAAAACTTCATTCATCATGACTATGTTCCAGTATTAAAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCg < 2:5553270/140‑1 (MQ=255) ttCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGAt < 2:3857203/140‑1 (MQ=255) ttCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGAt < 2:5087320/140‑1 (MQ=255) tCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATc > 2:5486067/1‑140 (MQ=255) cAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCt > 2:3010935/1‑140 (MQ=255) aGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTg > 2:2552400/1‑140 (MQ=255) gAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGc > 2:6287179/1‑140 (MQ=255) gAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGc > 1:3979777/1‑140 (MQ=255) cTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑a > 2:2234464/1‑140 (MQ=255) cTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑a > 2:3433281/1‑140 (MQ=255) cTTCATTCATCATGACTATGTTCCAGTATTAAAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑a > 1:4151611/1‑140 (MQ=255) cattcatCATGACTATGTTCCAGTATTACAATCGATCACGGCATTTTGTGTTTTCAGGATTTATTGCTTTTGTTTTTGTCTTGTGATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑aata > 2:4318227/1‑138 (MQ=255) cattcatCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑aaaa > 1:6418713/1‑140 (MQ=255) cattcatCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGAATTTATTGCTTTTGTTTTTGTATTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGGGATCTGCCGAC‑aaaa > 1:215113/1‑140 (MQ=255) attcatCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCNTCATCGAATGGTGATCTGCCGAC‑AAAAg > 1:5674502/1‑140 (MQ=255) atcatGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGa > 1:5916595/1‑140 (MQ=255) catGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGAcc > 2:440385/1‑140 (MQ=255) aCTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTCTTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCa > 2:2346001/1‑140 (MQ=255) cTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAg > 2:5397608/1‑140 (MQ=255) tATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAgg < 1:325985/140‑1 (MQ=255) tATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAgg < 2:3369419/140‑1 (MQ=255) tATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAgg < 2:3181761/140‑1 (MQ=255) tGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGgcg > 2:1085939/1‑140 (MQ=255) tGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGgcg > 2:2301702/1‑140 (MQ=255) tGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGgcg > 1:1279194/1‑140 (MQ=255) ttCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCa < 1:4545997/140‑1 (MQ=255) ccAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAAc > 1:5198460/1‑140 (MQ=255) cAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACt > 1:5297319/1‑140 (MQ=255) tATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTgc > 2:6404856/1‑139 (MQ=255) ttACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACt > 1:5336444/1‑140 (MQ=255) aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AATAGCGGACCTGCAGGCGCTACTTGACTCa > 1:6030860/1‑140 (MQ=255) aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCa > 2:4713553/1‑140 (MQ=255) aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCa > 1:3876947/1‑140 (MQ=255) aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCa > 1:6104719/1‑140 (MQ=255) cAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCAc > 2:1993530/1‑140 (MQ=255) cAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCAc > 1:5074379/1‑140 (MQ=255) aCGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACtaa > 2:4248836/1‑140 (MQ=255) gATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACtaaat > 1:3038870/1‑140 (MQ=255) gATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACtaaat > 1:1049398/1‑140 (MQ=255) gATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACtaaat > 2:355242/1‑140 (MQ=255) aTCACGGCATTTTGTTTTTTCAGCATTTAGTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTGTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAATGCGGTCCTGCAGGCGCAACTTGACTCTCtaaata < 2:1663573/140‑1 (MQ=255) tCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCTACTTGACTCACtaaatta > 2:6200364/1‑138 (MQ=255) tCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACtaaataa > 1:6310394/1‑140 (MQ=255) tCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACtaaataa < 1:3016444/140‑1 (MQ=255) tCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACtaaataa < 1:3105846/140‑1 (MQ=255) tCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACtaaataa > 2:3725542/1‑140 (MQ=255) aCGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAAc > 2:1514696/1‑140 (MQ=255) aTTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACaaaaa < 1:2513721/140‑1 (MQ=255) aTTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACaaaaa < 2:5427722/140‑1 (MQ=255) ttttGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAg > 1:1447427/1‑140 (MQ=255) ttGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCa < 1:814097/71‑1 (MQ=255) tttttCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCttt < 2:4098403/140‑1 (MQ=255) tttttCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCttt < 2:871305/140‑1 (MQ=255) tttttCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCttt < 1:1948562/140‑1 (MQ=255) tttttCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCttt < 1:5431370/140‑1 (MQ=255) tttCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCt > 2:4487954/1‑140 (MQ=255) tttaaTTTATTGCTTTTTTTTTTGTGTTGTTAGGCCAGAACACGGCGTTTGCGCGTTCTTCATCGATTTGTGATATGCCGAC‑ATATGAGTACATGCTGGCGCAACTTGACTCAATAAATAAACATTAAGATCTTTCTGCt < 2:3145221/136‑1 (MQ=255) cAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCt < 2:762166/140‑1 (MQ=255) cAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCt < 1:4733394/140‑1 (MQ=255) cAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCt < 1:3476385/140‑1 (MQ=255) cAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCt < 1:3297929/140‑1 (MQ=255) cAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCt < 1:6211675/140‑1 (MQ=255) gCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCa < 1:5537444/140‑1 (MQ=255) aTTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACaa > 2:2540721/1‑140 (MQ=255) aTTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACaa > 1:3695999/1‑140 (MQ=255) tGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAAc < 1:2735323/140‑1 (MQ=255) gCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACt < 2:3289561/140‑1 (MQ=255) ttttgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTgg < 1:4329658/140‑1 (MQ=255) tttgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACACAAAGATCTTTCTGCTCAGGACAAACTGGt > 2:1761532/1‑140 (MQ=255) ttgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTGGACTCACTACATACACAAAAAGATCTTTCTGCTCAGGACAAACTGGTg > 2:6112607/1‑140 (MQ=255) tttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcag < 2:1362519/140‑1 (MQ=255) tttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcag < 1:2602917/140‑1 (MQ=255) ttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcagc < 1:3055559/140‑1 (MQ=255) ttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcagc < 1:4672825/140‑1 (MQ=255) tttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcagca < 1:4460877/140‑1 (MQ=255) tttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcagca < 2:730747/140‑1 (MQ=255) tttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcagca < 1:1541690/140‑1 (MQ=255) tgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAgg > 2:5736477/1‑140 (MQ=255) tgtCTTGTTATGCCAGAACACGGCGTNTGCGCGGNCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCNGGACAAACTGGTGCAGCAgg < 1:5632409/140‑1 (MQ=255) tCTTGTTATGCCAGAACACGGCGTTTGCGCTGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGAt < 1:2856206/140‑1 (MQ=255) tCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGAt < 1:3598904/140‑1 (MQ=255) gcttAAGCCAGACCACGCCGATTGCGCGCGCGTCATCGCATCGTCATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCAATACATAAACAAAAAGATCATTCTGCTCAGGACAAACTGGTGCAGCCGGCTCTg < 2:1149508/138‑1 (MQ=255) gTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGa > 2:2669054/1‑140 (MQ=255) aTGCCATAACACGGCGTTTGCGCGGGCGTCCTCGAATGGTGATCTTCAGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCGGACAg < 2:3990406/140‑1 (MQ=255) aTGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAg < 2:533316/140‑1 (MQ=255) aTGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAg < 2:1018976/140‑1 (MQ=255) gCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGAt < 2:1232745/140‑1 (MQ=255) ccAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGACAAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGAt > 2:3500350/1‑140 (MQ=255) ccAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTCAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATa > 2:4578398/1‑140 (MQ=255) aGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCAGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACACACTGGTGCAGCAGGATCTGACAGATACa > 1:6132234/1‑140 (MQ=255) aGAACACGGCGTTTGAGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACa < 2:4358203/140‑1 (MQ=255) aaCACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACAtt > 1:5979074/1‑140 (MQ=255) aaCACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACAtt > 2:4202678/1‑140 (MQ=255) ggCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCa > 2:3402214/1‑140 (MQ=255) cGTTTGCGCGGGCGTCATCGAATTGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAATGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCAcc < 2:593648/140‑1 (MQ=255) cGTGTGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAAGAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCAcc < 2:2931764/140‑1 (MQ=255) tGCGCGGGCGTCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCACCCTCg > 1:865009/1‑140 (MQ=255) | TCGTTCTTCAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGAC‑AAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCACCCTCGATAAAA > NZ_CP025268/485554‑485826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |